Flagellimonas lutaonensis: VC82_652
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Entry
VC82_652 CDS
T03884
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mlt
Flagellimonas lutaonensis
Pathway
mlt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VC82_652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlt03021
]
VC82_652
03019 Messenger RNA biogenesis [BR:
mlt03019
]
VC82_652
Transcription machinery [BR:
mlt03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
VC82_652
Messenger RNA biogenesis [BR:
mlt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
VC82_652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
NACHT
Presenilin
AAA_22
AAA
GCD14
DUF4100
DDHD
Motif
Other DBs
NCBI-ProteinID:
AKA34318
UniProt:
A0A0D5YR02
LinkDB
All DBs
Position
664926..666488
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AA seq
520 aa
AA seq
DB search
MFEISDLKAKKLPELQEIAKELNVPKFKTMKKLDLVYQILDVQASNPKAVKETVAAEEKK
EKEAGPKAAKATEQSRRTDEKADNKEAASDTTKKPPRQKKEHHRQNGHQKNQGQGRKQSQ
QQHQRNGHEKKSSNFDKDLKNRYKEPEFEFDSIIESEGVLDIMQDGYGFLRSSDYNYLSS
PDDIYVSQSQIRLFGLKTGDTVLGNVRPPKEGEKYFPLIKVNKINGLDPQVVRDRVSFEH
LTPLFPREKFNIADRQSTISTRIMDLFSPIGKGQRGMIVSQPKTGKTMLLKDIANAIAAN
HPEVYQIILLIDERPEEVTDMQRNVRGEVVASTFDKEATEHVRVANIVIEKAKRLVECGH
DVVILLDSITRLARAYNTVQPASGKVLSGGVDANALHKPKRFFGAARNIENGGSLSIIAT
ALTETGSKMDEVIFEEFKGTGNMELQLDRRISNRRIFPAIDLISSSTRRDDLLLDENTIQ
RMWILRKYLADMNPVEAMEFIEQRIKQTKNNEEFLLTMNE
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagatttctgatctaaaagctaagaagcttcctgaattacaggagattgccaaa
gaattgaacgtacccaagttcaagaccatgaagaagcttgatttggtctatcaaatcttg
gatgtgcaagcatccaacccaaaagccgtaaaagaaacggtcgctgcggaagaaaaaaag
gaaaaagaagcggggccaaaggccgccaaggcgacagaacaaagcaggcgcaccgatgaa
aaggccgacaacaaagaggccgccagcgataccaccaaaaagccgccccgacagaaaaaa
gagcaccacaggcagaacggccaccaaaaaaatcaaggtcagggcagaaagcaaagccaa
cagcaacatcagcgaaacggccacgagaaaaaaagcagcaacttcgataaagacctcaaa
aaccgctataaagagcccgaatttgagtttgatagcattatcgaaagcgagggtgtgcta
gatattatgcaagatggctatggctttctaaggtcgtctgattacaattatctctcttca
cccgacgacatctatgtatcgcaatcacagattcgtctttttggcctaaaaactggtgat
acagtattgggcaatgtacgccccccgaaagagggagaaaaatattttccgttgatcaag
gtcaacaaaatcaacggtcttgacccacaggtggtgcgagaccgtgtgtcgtttgaacac
ctgacaccgcttttcccaagggaaaaattcaacattgccgataggcagagcaccatctct
acccgtatcatggaccttttctcgcccattggaaaaggccaaagaggcatgatagtatcg
cagcccaaaacgggtaagaccatgttgttgaaagatattgcgaatgcgattgccgccaac
caccccgaagtctaccagatcattcttctgattgatgaacggcccgaggaggtgaccgat
atgcaacgcaatgtacgtggtgaagtggtagcctctacctttgacaaagaggcaaccgaa
cacgttcgggtggcgaacattgtaattgaaaaggccaaaagattggtggaatgcggccat
gatgtggttattttgttagattcgattacacgtctggcaagggcttacaacactgtacaa
ccagcatctggtaaagtattgagtggtggtgttgacgcgaacgcactgcataaaccaaaa
cgtttcttcggtgctgccagaaacattgaaaacggtgggtcattatcgatcattgcgaca
gcgcttaccgagaccggttcaaaaatggacgaggttatctttgaagagttcaagggtacc
ggtaacatggagctgcaacttgaccgtcgtatcagtaaccgtagaattttccctgccatc
gacttgatctcatcttctacaagacgagacgatctactgctcgatgagaacaccattcag
cgtatgtggatactgcgtaaatacttggcagacatgaatccggttgaggcgatggaattc
attgaacagcggataaagcagaccaagaacaacgaagagttcttgctcaccatgaacgaa
taa
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