KEGG   Flagellimonas lutaonensis: VC82_963
Entry
VC82_963          CDS       T03884                                 
Name
(GenBank) 60 kDa chaperonin
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
mlt  Flagellimonas lutaonensis
Pathway
mlt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mlt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VC82_963
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mlt03019]
    VC82_963
   03110 Chaperones and folding catalysts [BR:mlt03110]
    VC82_963
   03029 Mitochondrial biogenesis [BR:mlt03029]
    VC82_963
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mlt04147]
    VC82_963
Enzymes [BR:mlt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     VC82_963
Messenger RNA biogenesis [BR:mlt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     VC82_963
Chaperones and folding catalysts [BR:mlt03110]
 Heat shock proteins
  HSP60 / Chaperonin
   VC82_963
Mitochondrial biogenesis [BR:mlt03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    VC82_963
Exosome [BR:mlt04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   VC82_963
  Exosomal proteins of other body fluids (saliva and urine)
   VC82_963
  Exosomal proteins of breast cancer cells
   VC82_963
  Exosomal proteins of colorectal cancer cells
   VC82_963
  Exosomal proteins of bladder cancer cells
   VC82_963
SSDB
Motif
Pfam: Cpn60_TCP1 NNH2 Phage_connect_1 Pho88
Other DBs
NCBI-ProteinID: AKA34611
UniProt: A0A0D5YRX2
LinkDB
Position
1005725..1007356
AA seq 543 aa
MAKDITFDIDARDGLRKGVDALANAVKVTLGPKGRNVIITKSFGAPQVTKDGVTVAKEIE
LADALENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVDAIVENLAKQSKKVGDSTEKIKQVAAISANNDEAIGDLIAQAFEKVGKEGVITVEEA
KGTDTYVDVVEGMQFDRGYLSPYFVTDSEKMVAELDNPYILLFDKKISAMKDLLPVLEPV
AQSGKPLLIIAEDVDGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAILTNGTV
ISEERGFSLENATIDMLGSCEKVTIDKDNTTIVNGSGSADNIKTRVNQIKSQIETTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAKSVLSKVETENDDEATGLQIVARAIESPLRTIVENAGGEGSVVVAKVMDGKGDFGYDA
KADKYVEMMKAGIIDPTKVTRVALENAASVAGMILTTECALTDIKEENPAPAMPGGGGMP
GMM
NT seq 1632 nt   +upstreamnt  +downstreamnt
atggcaaaagacattacgtttgatatagatgcccgcgacggccttagaaaaggtgttgac
gccttggccaatgcggtaaaggtaacgttggggcccaaagggcgaaacgttatcatcaca
aaatcattcggggctccacaggtaaccaaagacggtgtgacagtggccaaagagatcgag
ttggccgatgcccttgaaaacatgggtgctcaaatggtcaaagaagtggcctcaaagacc
aacgacctggcaggtgacggtaccaccacagctactgttcttgcacaggcaatcgttaaa
gaaggcttgaaaaacgtggcagctggcgccaaccctatggaccttaaaagaggtatcgat
aaggcagtggatgccattgttgaaaatttggccaagcaatctaaaaaagtgggtgactca
accgagaaaatcaagcaagttgccgctatttcggcaaacaacgacgaagccatcggagac
ttgattgcccaagcattcgaaaaagtgggcaaagaaggtgttatcactgttgaagaggcc
aaaggtaccgacacttacgtcgatgttgtagaaggtatgcagtttgaccgcggttacctt
tctccatactttgttaccgattcagaaaaaatggtggccgagctcgacaacccttacatc
ttgctttttgataagaagatctctgcaatgaaagacctgcttcctgtattggagcctgta
gcacaatctggaaagcccctattgatcattgccgaagatgttgatggtgaggcattggca
actttggtcgtcaacaaattgcgcggttcactgaaaatcgctgctgtaaaagctcctggt
tttggtgaccgcagaaaggcaatgcttgaagatattgccatcttgaccaatggtaccgta
atttcagaagaaagaggtttctctcttgagaatgccaccatcgatatgttgggttcatgc
gagaaggtaactatcgacaaagacaacactaccattgtaaatggttcaggttctgccgat
aacatcaagacccgagttaaccaaatcaagtcgcagatcgagaccactacctctgattac
gacaaagaaaaactacaagagcgcttggccaaattggcaggcggtgtggccgtactttac
gtaggtgccgcttctgaagttgagatgaaagagaagaaagaccgtgttgacgatgccctg
catgccactagggctgccgttgaagaaggtatcgtggccgggggtggcgttgccctggta
cgtgccaagtcggttctttcaaaagtggaaaccgagaacgacgatgaggctacaggtcta
caaatcgtggcacgcgccatcgaatcaccacttagaaccattgtagaaaacgccggcggc
gaaggttctgtggttgttgccaaagttatggatggcaaaggtgacttcggatatgatgcc
aaagccgacaaatatgttgaaatgatgaaagcaggtatcatcgacccaaccaaggtaaca
cgggttgcgttggaaaacgccgcatcagtggccggaatgattctgaccaccgagtgcgcc
ttgaccgacatcaaagaagaaaaccccgcacctgctatgccaggaggcggtggaatgcct
ggcatgatgtaa

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