KEGG   Martelella lutilitoris: JET14_02415
Entry
JET14_02415       CDS       T07693                                 
Symbol
ligD
Name
(GenBank) DNA ligase D
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
mlut  Martelella lutilitoris
Pathway
mlut03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mlut00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    JET14_02415 (ligD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mlut03400]
    JET14_02415 (ligD)
Enzymes [BR:mlut01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     JET14_02415 (ligD)
DNA repair and recombination proteins [BR:mlut03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     JET14_02415 (ligD)
SSDB
Motif
Pfam: LigD_Prim-Pol LigD_N DNA_ligase_A_C DNA_ligase_A_M DNA_primase_S RNA_ligase mRNA_cap_enzyme
Other DBs
NCBI-ProteinID: QQM31055
UniProt: A0A7T7KLU6
LinkDB
Position
514175..516640
AA seq 821 aa
MVEVDRLAEYVTRRDFSRTGEPGRGTRRKSRKDKLSFVVQKHDASRLHYDFRLEWDGTLL
SWAVTRGPSDDPREKRLAVRTEDHPLDYAGFEGTIPKDQYGGGTVMVWDRGTWEPVGDPE
QGLSEGKLKFRLKGERMNGGWALVRMRGRKSERRENWLLIKERDGMAGDEADHLTGTFET
SVKTGRLLDAIEQDGKPKRTGSKSGSSGGKMPKFRKPQLATLYDAVPEGESWIHETKFDG
YRCIAAVGKGGPRFFTRSGQDWTDKYQALADAFDALEGESLLLDGEIMAADVPKNGSAFS
ALQAALHDGAPLLYYVFDILERNGRTLTDRPLLERKAALEEALAPLDLEEGKVRVSAWVE
GNGGDILEKICKAGGEGIVSKKADAPYRHSRTKSWRKVKCGKRQEFVIGGYSPSSKRGRA
FASLLLGQYADDGRLCYRGRAGTGFSANELDRLGGKLKSLSRKTAPFEDVPGAIARDAAW
VTPKLVAEIEFAELTAEGHVRHGAYLGLRGDKEAEEVTPENETRSDVKVEGITITHPDRE
LFAKAGVSKLDIARHYGLVGERMVEICGERPISLLRCPAGIEGECFFQKHAGKGFPDELT
RIDIAEKDGETGEYLYASGAEGYVAAAQMGTIEFHGWAARADRLERPDRMVFDLDPDEKL
GFAETKQAAFDLKALLKDIGLEAYAMATGGKGIHVVVPLRRTVGWETLKSFAKTLAHLMA
EREPDRFTATMTKDKRKGKIFIDWLRNERGATAILPYSVRARPGAPVATPVTWDELKELK
SAAAFGLKDMAERLGQEEPALAVKPQTLAKAVIDKLERRLG
NT seq 2466 nt   +upstreamnt  +downstreamnt
atggtcgaggtcgacagacttgcagaatacgtgacgcgccgcgatttttcgcgaaccggg
gagcctgggcgcggaacccgcaggaaaagccgcaaggacaagctttccttcgtggtgcag
aaacacgatgcctcccgacttcactatgactttcggctggaatgggacggcacgctcctg
agctgggcggtgacgcgcggaccgagcgacgatccgcgggaaaagcggctggcggtgcgc
accgaggaccatccgctcgactatgccggcttcgaaggcacgatcccgaaggaccagtat
ggcggcggcacggtcatggtctgggatcgcggcacatgggaaccggttggggaccccgaa
caggggctttccgagggcaaactgaaattccgcctcaagggcgaacgcatgaacggcggc
tgggcgctggtgcgcatgcgcggcaggaagagcgaaaggcgcgagaactggctgctgatc
aaggagcgcgacggcatggccggcgacgaggccgatcatctgacgggcacctttgagacc
agcgtcaagaccgggcgcttgctcgacgcgatcgaacaggatgggaagccgaaaaggacc
gggtcgaagtcaggatcttccggcgggaaaatgccgaaattcaggaagccccaactggcc
acgctctacgacgcggtgccggaaggcgaaagctggatccacgaaaccaaatttgacggc
tatcgctgcatagccgccgtgggcaagggcgggccgcgcttcttcacccgctcgggccag
gactggaccgacaaataccaggcgcttgccgatgcctttgacgcgctggaaggcgagagc
ctgttgctggacggcgagatcatggcggccgatgttcccaaaaacggctcggccttttcc
gcgttgcaggcggcgcttcatgatggtgcgccgctcctctattatgtgttcgacatcctt
gagcgcaatggcaggacgcttaccgaccggccgcttcttgagcgcaaggcggcgctggag
gaggcgcttgcgccgcttgacctcgaagagggcaaggtgcgggtttcggcctgggtcgag
ggcaatggcggcgacattctcgagaagatctgcaaggccggcggcgagggcatcgtctcc
aagaaggccgatgcgccctatcgccacagccgcacgaaaagctggcgcaaggtcaagtgc
ggcaagcggcaggagttcgtcatcggcggctattcgccctcttcgaaaagaggccgcgcc
ttcgcctcgctgttgctcggacaatatgcggatgacggacgtctgtgctatcgtggccgc
gccgggacagggttttcggcgaatgaactcgaccggttgggcggcaagctgaagagcctt
tcccgcaagaccgctcctttcgaagatgtgccgggggcgatcgcgcgggatgctgcctgg
gttacgccgaaacttgtggcggaaatcgagttcgcggagctgaccgccgaagggcatgtg
cgccacggcgcttatctcggcctgcgcggcgacaaggaggcggaagaggtgacaccggaa
aacgagacgcgcagcgacgtcaaggtcgaaggcatcacgataacccatccggaccgcgaa
ctctttgcgaaggccggggtgagcaagctcgatatcgcccggcattatggtctcgtcggc
gaacgcatggtcgaaatctgcggcgaacgcccgatttcgctgctgcgctgccccgccggc
atcgagggggagtgctttttccagaaacacgctggcaagggctttcccgatgagctgacc
cggatcgacattgcggaaaaggacggagagacgggagaatatctctatgcttcgggcgcg
gaaggctatgtcgccgccgcccagatgggcacgattgagtttcacggctgggcggcgcgc
gccgaccggctggaacgacctgaccggatggtgttcgatctcgatcccgacgagaagctt
ggctttgccgaaacgaagcaggcggctttcgacctgaaggccctgctgaaagatatcggg
cttgaggcctatgcgatggcgaccggcggcaagggcatccacgttgtcgtgccgcttcgg
cgcaccgttggctgggagacgctcaaatccttcgccaagacgctcgcccacctgatggcg
gagcgggagccggatcgcttcactgccaccatgacgaaggacaagcgcaaggggaagatc
ttcatcgactggctgcgcaacgaacgcggggcgaccgcgatcctgccctattccgtccgc
gcccggcccggcgcccctgtggccacccccgtcacctgggacgaactgaaggagctgaag
tcggccgccgctttcggcttgaaggacatggccgaacggctggggcaggaagagccggcg
ctggccgtcaagccgcagacgctcgccaaggcggtgatcgacaagctcgagaggcggctt
ggctga

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