Martelella lutilitoris: JET14_14730
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Entry
JET14_14730 CDS
T07693
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mlut
Martelella lutilitoris
Pathway
mlut03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mlut00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JET14_14730 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlut03021
]
JET14_14730 (rpoC)
03400 DNA repair and recombination proteins [BR:
mlut03400
]
JET14_14730 (rpoC)
Enzymes [BR:
mlut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JET14_14730 (rpoC)
Transcription machinery [BR:
mlut03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JET14_14730 (rpoC)
DNA repair and recombination proteins [BR:
mlut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JET14_14730 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
QQM29557
UniProt:
A0A7T7HI31
LinkDB
All DBs
Position
complement(3058837..3063045)
Genome browser
AA seq
1402 aa
AA seq
DB search
MNQEVMNLFNPQAPAQVFDSIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCS
RIFGPMKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRISTLLDMTLKDVERVLYFENYIVTEPGLTDLKENQLLSEEEYMLAVDEFGEDQFSA
NIGAEAIYEMLAGMDLEKIAGDLRAELADTTSDLKQKKLMKRLKIVENFLESGNRPEWMI
MKVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIIRNEKRM
LQESVDALFDNGRRGRVITGANKRPLKSISDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAKKLVEKERPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPTLVEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGQPIIVPSQDMVLGLYYLSIMNENEPGEGMAFADMGELHHALE
NKVVTLHSKIKGRFKTVDEDGNEVSKIYETTPGRMIIGELLPKNSNVPFETCNQEMTKKN
ISKMIDTVYRHCGQKDTVIFCDRIMSLGFGHACKAGISFGKDDMVIPDAKHEIVAETEAL
VKEYEQQYNDGLITQGEKYNKVVDAWGKATEKVTEEMMARIKAVEFDPETGRQKQMNSIY
MMSHSGARGSVNQMRQLGGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSSHGARKGL
ADTALKTANSGYLTRRLVDVAQDCIVNTADCGTDKGLTMTAIVDAGQVVASIGQRVLGRA
ALVDIEDPVTGELIVEAGRQINEADVIKIEASGIQSVQIRSALTCEVQTGVCQVCYGRDL
ARGTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHLGGTANVVDQSFLESSYEGTVRIKNRN
VLRNSDGVLVAMGRNMAIQILDQRDQERSSQKVAYGSKLYVDDGDTVRRGQRLAEWDPYT
RPMMTEVSGTVDFEDLVEGLSVTETTDEATGFTKRSVIDWRSTPRGSDLKPSIVIKDANG
EIMKLPRGGEARLPLSVDAILSVEPGQKVSQGDVLARSPLESAKTKDITGGLPRVAELFE
ARRPKDHAVIAEIDGTIRFGRDYKNKRRIQIEPAEDGVEPVEYLIPKSKPFHLQDGDYIE
KGDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVVINDKHIEVIVRQMLQKIE
ITASGDSGQITGDIIEAIAFDNMNEELVAQGKRPAEGEPVLLGITKASLQTPSFFSAASF
QETTKVLTEAAIAGKVDTLQGLKENIIVGRLIPAGTGRAMGQVRRIATQRDDLIIDARRK
ASGADEATPMLSSMNEEPQPGE
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaggtcatgaatcttttcaatccgcaggcgccggcgcaggtcttcgattcg
atccggatctcgatcgccagcccggaaaagatcctttcctggtcttatggcgaaatcaag
aagccggaaaccatcaactaccgcacgttcaagcccgagcgtgacggcctgttctgctcg
cgcatcttcggcccgatgaaggactatgagtgcctgtgcggcaagtacaagcgcatgaag
tacaagggcatcatctgcgaaaagtgcggcgtcgaagtcacgctttcgcgcgtgcgccgc
gagcgtatgggccatatcgagctcgccgctccggttgcccatatctggttcctgaaatcg
ctgccgagccgtatctcgacccttctcgacatgacgctgaaggatgtcgagcgcgttctc
tatttcgagaactacatcgtcaccgaaccgggcctgacggatctgaaggaaaatcagctc
ctgtcggaagaggaatacatgctggccgtggacgagttcggcgaggaccagttctcggcc
aatatcggcgcggaagccatctatgagatgcttgccggcatggatctcgagaagatcgcg
ggcgacctgcgcgccgaactggccgacaccacgtcggatctgaagcagaagaagctgatg
aagcgtctcaagatcgtcgagaactttcttgagtcgggcaaccgtcccgaatggatgatc
atgaaggtcgttccggtgatcccgccggacctgcgcccgctcgtgccgctcgacggcggc
cggttcgcgacgtccgacctcaacgatctctatcgtcgcgtgatcaaccgtaacaaccgt
ctgaagcgcctcatcgagctgcgcgcgccgggcatcatcatccgcaacgagaagcgcatg
cttcaggaatcggttgacgccctgttcgacaacggccgtcgcggccgcgtcatcaccggc
gccaacaagcgtccgctgaagtcgatctccgacatgctgaagggcaagcagggccgcttc
cgccagaacctgctcggcaagcgcgtcgactattccggccgttcggtcatcgtgaccggc
ccggaactgaagctgcaccagtgcggcttgccgaagaagatggcgctcgaactgttcaag
ccgttcatctacgcccgcctcgacgccaaggggtattcctcgaccgtcaagcaggcgaag
aagctggtcgaaaaggaacgtccggaagtctgggatatcctcgacgaggtgatccgcgag
catccggtgcttctgaaccgtgcgccgacgctgcaccgcctgggcatccaggcgttcgag
ccgacgctggtcgaaggcaaggccatccagctgcacccgctcgtctgcacggccttcaac
gccgacttcgacggcgaccagatggccgttcacgtgccgctgtcgctcgaagcccagctt
gaagcccgcgtgctgatgatgtcgaccaacaacatcctgcatccggccaatggtcagccg
atcatcgtgccgtcgcaggacatggttctcggcctctactatctctcgatcatgaacgag
aacgagcccggcgaaggcatggcctttgcagacatgggcgagctccaccatgcgctcgag
aacaaggtcgtcacgctgcactccaagatcaagggccgtttcaagacggtcgacgaggac
ggcaacgaagtctcgaagatctacgagacgacgcccggccgcatgatcatcggcgagctt
ctgccgaagaactcgaacgttccgttcgagacctgcaaccaggaaatgaccaagaagaac
atctccaagatgatcgacacggtctatcgccactgcggccagaaggacacggtgatcttc
tgcgaccgcatcatgtcgctcggcttcggccatgcgtgcaaggccggcatttccttcggc
aaggacgacatggtcattcccgatgccaagcacgaaatcgttgccgagaccgaagcgctg
gtgaaggaatacgagcagcagtacaatgacggtctcatcacccagggcgagaagtacaac
aaggttgtcgacgcctggggcaaggcgaccgagaaggtcacggaagagatgatggcccgc
atcaaggccgtcgaattcgacccggagaccggtcgccagaagcagatgaactcgatctac
atgatgagccattccggcgcgcgtggttcggtgaaccagatgcgtcagctcggcggcatg
cgcggcctgatggcgaagccctccggcgagatcatcgagacgccgatcatctcgaacttc
aaggaaggcctgaccgtgaacgagtacttcaactcgtcgcacggcgcccgtaagggtctg
gccgataccgccctgaaaaccgcgaactcgggttacctgacccgtcgtctggtcgacgtg
gcccaggactgcatcgtcaacaccgccgattgtggcaccgacaagggcctgaccatgacg
gccatcgtcgatgccggccaggtggttgcctccatcggccagcgcgtgctcggccgtgcg
gccctcgttgacatcgaggatccggtcaccggtgaactgatcgtcgaggccggccgtcag
atcaacgaggccgacgtcatcaagatcgaggcttcgggcatccagtcggtgcagatccgt
tcggcgctgacctgcgaggttcagacgggcgtctgccaggtctgctacggtcgcgatctt
gcccgcggtacgccggtgaatatcggcgaagccgtcggcgttatcgctgcccagtcgatc
ggcgagcccggcacgcagctcaccatgcgtaccttccaccttggcggtacggcgaacgtg
gttgaccagtcgttcctggaatcctcctatgagggaacggtgcggatcaagaaccgcaac
gttctgcggaactccgatggcgttctggtggcaatgggccgcaacatggcgatccagatc
ctcgaccagcgcgatcaggagcggtcttcgcagaaggttgcctatggttcgaagctctat
gtcgatgacggcgacacggttcgtcgcggccagcgtcttgccgagtgggacccctacacc
cgcccgatgatgacggaagtctccggcacggttgacttcgaagaccttgtcgaaggtctg
tccgtcaccgaaacgacggatgaggcgaccggcttcaccaagcgctcggtcatcgactgg
cgttcgacgccgcgcggatccgatctgaagccgtccatcgtcatcaaggatgccaatggc
gaaatcatgaagttgccgcgcggcggcgaggcccgccttccgctgtcggtggatgcgatc
ctctcggtcgagcccgggcagaaggtcagccagggcgacgtgctggcccgttcgccgctg
gaaagcgccaagaccaaggacattaccggtggtctgccgcgcgttgcggaactgttcgaa
gctcgccgtccgaaggaccacgccgtgatcgccgagatcgacggtacgatccgcttcggc
cgcgactacaagaacaagcgccgcatccagatcgagcctgcggaagacggcgtcgagccg
gtggaatacctcattccgaagtcgaagccgttccatcttcaggatggcgactacatcgag
aagggcgactacatcctcgacggcaacccggctccccatgacatccttgccatcaagggc
gtcgaggcgctggcctcctacctcgtcaacgagatccaggaagtctatcgtctgcagggc
gtggtcatcaacgacaagcacatcgaggtgatcgttcgccagatgctgcagaagattgag
atcaccgcttcgggcgacagtggccagatcaccggcgacatcatcgaggcgatcgccttt
gacaacatgaatgaggaactggtggcacagggcaagcgccccgccgaaggcgagccggtg
ctgctcggtatcaccaaggcctcgctgcagacgccgtccttcttctcggccgcatccttc
caggagaccaccaaggtgctcacggaagccgcgattgccggcaaggtcgacacgctccag
ggcctgaaggagaacatcatcgtcggccgtctgatcccggccggtacgggacgtgcgatg
ggccaggttcgccgcatcgcgacccagcgcgacgatctcatcatcgacgcccgccgcaag
gcttccggcgccgacgaggcaacgccgatgctctcctccatgaacgaagagccgcagccg
ggcgaataa
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