Microbacterium lemovicicum: CVS47_00165
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Entry
CVS47_00165 CDS
T06301
Symbol
recQ_1
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mlv
Microbacterium lemovicicum
Pathway
mlv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CVS47_00165 (recQ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlv03019
]
CVS47_00165 (recQ_1)
03400 DNA repair and recombination proteins [BR:
mlv03400
]
CVS47_00165 (recQ_1)
Enzymes [BR:
mlv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CVS47_00165 (recQ_1)
Messenger RNA biogenesis [BR:
mlv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CVS47_00165 (recQ_1)
DNA repair and recombination proteins [BR:
mlv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CVS47_00165 (recQ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AZS35573
UniProt:
A0A3Q9J177
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All DBs
Position
170853..172085
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AA seq
410 aa
AA seq
DB search
MTPPAAPGDPYADLVWDPDELAPPDDEFAPPPDEYLPGGFDDRPAGPRATGERSATSRAA
SSSAPSRAPSSAAPVRGVRAARYPTAAAALHDVYGYDAFRGDQADIVEHVIGGGDAVVLM
PTGGGKSVTYQVPALVREGTGLVVSPLIALMHDQVDALTVNGVRAAYLNSTQSPAERADV
ERAYIAGELDLIYVAPERLSSPATASLLQRGTLSVIAVDEAHCVSQWGHDFRPDYLALGG
LTDLFPGVPRMALTATATAATHREITERLRLPEARHFVASFDRPNIQYRIEPKVDPRRQL
VSFVKEHAGEAGIVYALSRKSVEATAEHLRTQGVDALPYHAGLDAGMRARHQSRFLRDEG
VVMVATIAFGMGIDKPDVRFVAHIDCRSRSRATTRRPAAPAVTASRRSRG
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
gtgacccctcctgccgcgcccggcgacccgtacgccgacctcgtgtgggatcccgatgag
ctcgcaccgcccgacgacgagttcgccccgccgcccgacgagtacctccccggcggcttc
gacgaccggccggccggtccccgtgcgaccggcgagcgcagcgcgaccagccgggcggcg
agcagcagcgcgcccagccgggcgccgagcagtgccgcccccgtccgcggcgtgcgcgcc
gcgcgctacccgaccgccgcggcggcgctgcacgacgtctacggctacgacgcgttccgc
ggtgaccaggccgacatcgtcgagcacgtcatcggcggcggcgacgccgtcgtgctcatg
ccgacgggcggcggcaagagcgtcacctatcaggtgcccgcgctggtgcgagagggcacc
ggcctcgtcgtcagcccgctcatcgccctcatgcacgaccaggtcgacgcgctcaccgtc
aacggcgtgcgggcggcctacctcaactccacgcagagccccgcggaacgcgccgacgtc
gagcgcgcctacatcgccggcgagctcgacctcatctacgtcgccccggagcggctgtcc
tcgccggccacggcctccctgctccagcgcggcacgctcagtgtgatcgcggtcgacgag
gcgcactgcgtgtcgcagtggggccacgacttccggcccgactacctcgcgctcggcggc
ctgaccgacctcttccccggcgtgccgcgcatggcgctcacggccacggccaccgccgcc
acgcaccgcgagatcactgagcggctgcgcctgcccgaagcacgccacttcgtcgcgagc
ttcgaccgcccgaacatccagtaccgcatcgagcccaaggtcgacccgcgccgccagctc
gtctccttcgtcaaggagcacgcgggcgaagccggcatcgtctacgcgctgagccgcaag
tcggtcgaggccaccgctgagcacctccgcacccagggcgtcgacgcactgccctatcac
gcgggtctcgacgccggcatgcgggcccgccaccaatcccgcttcctgcgcgacgagggc
gtcgtgatggtcgcgaccatcgcgttcggcatgggcatcgacaagcccgacgtgcgcttc
gtcgcgcacatcgactgccgaagtcggtcgagggctactaccaggagaccggccgcgccg
gccgtgacggcgagccgtcggtcgcgtggatga
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