Microbacterium lemovicicum: CVS47_00471
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Entry
CVS47_00471 CDS
T06301
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mlv
Microbacterium lemovicicum
Pathway
mlv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mlv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CVS47_00471 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlv03021
]
CVS47_00471 (rpoA)
03400 DNA repair and recombination proteins [BR:
mlv03400
]
CVS47_00471 (rpoA)
Enzymes [BR:
mlv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CVS47_00471 (rpoA)
Transcription machinery [BR:
mlv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CVS47_00471 (rpoA)
DNA repair and recombination proteins [BR:
mlv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CVS47_00471 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AZS35873
UniProt:
A0A3S9W7F0
LinkDB
All DBs
Position
495290..496279
Genome browser
AA seq
329 aa
AA seq
DB search
MLIAQRPTLTEEKVGEFRSRFIIEPLEPGFGYTIGNALRRSLLSSIPGAAVTSIRIDGVL
HEFSTIPGVKEDVTEIILNIKQLVVSSERDEPITAYLRKTGSGEVTAADISAPAGVEVHN
PELVIATLNDTAKFELELTIERGRGYVSATQNRNEYAEAGQVPIDSIYSPVLKVSYRVEA
TRAGERTDFDKLVLDVETKNSMAPRDAVASAGRTLTELFGLARELNVEAEGIEIGPAPVE
TVLSNELSMPIEDLDLSVRSYNCLKREGINTVSELVALSETQLMNIRNFGQKSVDEVRDK
LISLGLSLKDSVPGFDGAHFYGGYDDETA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatcgcacagcgtcccaccctgaccgaggaaaaggtcggggagttccgcagccgc
ttcatcatcgagccgctcgagcccggcttcggctacacgatcggcaacgcgctgcgtcgc
agcctcctgtcgtcgatccccggcgccgcagtgacgtcgatccgcatcgacggcgtcctc
cacgagttcagcaccattccgggtgtgaaggaggatgtcaccgagatcatcctcaacatc
aagcagctggtcgtctccagcgagcgcgacgagcccatcacggcgtacctgcgcaagacc
ggttcgggcgaggtcacggccgccgacatctcggctccggccggcgtcgaggtccacaac
cccgagctcgtcatcgcgacgctcaacgacaccgcgaagttcgagctcgagctgacgatc
gagcgtggccgcggctacgtctcggcgacccagaaccgcaacgagtacgccgaggccggt
caggtcccgatcgactcgatctactcgcccgtcctcaaggtctcgtaccgcgtcgaggcg
acgcgtgccggtgagcgcaccgacttcgacaagctggtgctggacgtcgagacgaagaac
tcgatggccccccgcgacgcggtcgcatccgccggtcgcacgctgaccgagctgttcggc
ctcgcccgcgagctgaacgtcgaggccgagggcatcgagatcggccccgcgccggtcgag
accgtcctgtcgaacgagctgtccatgccgatcgaggacctcgacctgtcggtgcgctcg
tacaactgcctcaagcgcgagggcatcaacaccgtcagcgagctcgtggccctctccgag
acgcagctcatgaacatccgcaacttcggtcagaagtcggtcgacgaggtgcgcgacaag
ctcatctcgctgggcctgtcgctgaaggactcggtccccgggttcgatggcgcgcacttc
tacggcggctacgacgacgagaccgcctga
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