Microbacterium lemovicicum: CVS47_00633
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Entry
CVS47_00633 CDS
T06301
Symbol
alkA_1
Name
(GenBank) putative bifunctional transcriptional activator/DNA repair enzyme AlkA
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mlv
Microbacterium lemovicicum
Pathway
mlv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mlv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CVS47_00633 (alkA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mlv03000
]
CVS47_00633 (alkA_1)
03400 DNA repair and recombination proteins [BR:
mlv03400
]
CVS47_00633 (alkA_1)
Enzymes [BR:
mlv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CVS47_00633 (alkA_1)
Transcription factors [BR:
mlv03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CVS47_00633 (alkA_1)
DNA repair and recombination proteins [BR:
mlv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CVS47_00633 (alkA_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AZS36034
UniProt:
A0A3S9W7Q4
LinkDB
All DBs
Position
675931..677421
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AA seq
496 aa
AA seq
DB search
MTFDERYRAIDSRDTRFDGQFVTAVRSTGIYCRPSCPARTPKAANVTFYATSAAAHEAGY
RACKRCLPEAAPGSPEWNLRGDVVARAMRLIADGIVEREGVPGLAARLGYSPRHLTRLIA
AELGAGPLALSRAHRAHTARMLLVGTELPASEVAFSAGFASIRQFNETVREVFGMPPLEL
RARRAAGRPEAPAGQLDLVLPHRGELDSAGLFGWMAAHAVGGVESGSAHRFARTLRLPGG
PAWFELRVDADGRVRLRAQLAALSDLPAMVTRARRLFDLDADPVAVDDALSQHPELAPLV
AAVPGVRVPGAVDPHEMLIRAMIGQQISVAAARTAQTRLADALGERMQTPHGEGILFPTT
AAIAERGHEVLRGPAARVRSVIGAAAALAEGRLDVGPGDDGAEQRAALLAMPGIGPWTAD
YVRMRVLQDPDVLLPGDVAARAGALAAGIPADAAGLTRWAARAAPWRSYLMAHLWYAAPV
TRAWRATPDPIPTEDS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcgacgagcggtaccgcgcgatcgactcgcgcgacacccgcttcgacgggcag
ttcgtcacggcggtgagatccaccggcatctactgccgccccagctgtccggcgcgcacg
ccgaaggccgccaacgtcacgttctacgccacgtccgccgccgcccacgaggccggctat
cgcgcctgcaagcgctgcctcccggaggccgcgcccggctcgccggagtggaacctccgc
ggcgacgtcgtggcccgggcgatgcgcctcatcgccgacggcatcgtggagcgcgagggc
gtgccggggctggccgcgcgcctcggctactcgccgcgccacctgacccgcctcatcgcc
gccgagctcggagccgggcccctcgctctcagccgcgctcaccgggcgcacaccgcccgc
atgctgctcgtgggcaccgagctgcccgcgtcggaggtggcgttctcggcagggttcgcc
agcatccgtcagttcaacgagaccgtgcgcgaggtcttcgggatgccgcctctcgagctg
cgcgcgcgccgtgccgccgggcggcccgaggctcccgccggccagctcgacctcgtgctg
ccccatcgcggcgagctcgactccgccggcctcttcggctggatggccgcccatgcggtc
gggggagtggagtccggcagcgcgcatcggttcgcccgcacgctgcggctcccgggtggt
ccggcgtggttcgagctgcgcgtcgatgcggacggccgcgtgcgcctccgcgcccagctg
gcggcgctctccgaccttcccgcgatggtgacccgcgcacgccggctgttcgacctcgac
gcggatccggtcgcggtggacgacgcgctgtcgcagcatcccgagctggcccccctcgtc
gcagcggtccccggcgtgcgcgttccgggcgcggtggacccgcacgagatgctcatccgg
gcgatgatcggccagcagatctcggtggccgccgcccgcaccgcgcagacgcggctggcc
gatgcgctgggcgagcgcatgcagacgccccacggggagggcatcctcttcccgacgacc
gccgcgatcgccgagcgcggccacgaggtgctgcgcggacccgctgcgcgcgtgcgctcg
gtcatcggcgcggccgccgctctggccgagggccggctcgatgtcggccccggcgacgac
ggcgcggagcagcgcgcggcgctgctggcgatgcccgggatcggtccgtggaccgcggac
tacgtgcgcatgcgcgtgctgcaggaccccgacgtgctcctgccgggcgacgtcgcggca
cgcgccggggcgctcgccgccggcatccccgcggacgctgccggactcacccgctgggcc
gcccgcgcggccccctggcgcagctacctgatggcgcacctctggtacgccgcgcccgtc
acgcgcgcgtggcgggcgacccccgacccgattccgacggaggactcatga
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