| Entry |
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| Symbol |
alkA_1
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| Name |
(GenBank) putative bifunctional transcriptional activator/DNA repair enzyme AlkA
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| KO |
| K13529 | AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] |
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| Organism |
mlv Microbacterium lemovicicum
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:mlv00001]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CVS47_00633 (alkA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:mlv03000]
CVS47_00633 (alkA_1)
03400 DNA repair and recombination proteins [BR:mlv03400]
CVS47_00633 (alkA_1)
Enzymes [BR:mlv01000]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CVS47_00633 (alkA_1)
Transcription factors [BR:mlv03000]
Prokaryotic type
Helix-turn-helix
AraC family
CVS47_00633 (alkA_1)
DNA repair and recombination proteins [BR:mlv03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CVS47_00633 (alkA_1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
675931..677421
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| AA seq |
496 aa
MTFDERYRAIDSRDTRFDGQFVTAVRSTGIYCRPSCPARTPKAANVTFYATSAAAHEAGY
RACKRCLPEAAPGSPEWNLRGDVVARAMRLIADGIVEREGVPGLAARLGYSPRHLTRLIA
AELGAGPLALSRAHRAHTARMLLVGTELPASEVAFSAGFASIRQFNETVREVFGMPPLEL
RARRAAGRPEAPAGQLDLVLPHRGELDSAGLFGWMAAHAVGGVESGSAHRFARTLRLPGG
PAWFELRVDADGRVRLRAQLAALSDLPAMVTRARRLFDLDADPVAVDDALSQHPELAPLV
AAVPGVRVPGAVDPHEMLIRAMIGQQISVAAARTAQTRLADALGERMQTPHGEGILFPTT
AAIAERGHEVLRGPAARVRSVIGAAAALAEGRLDVGPGDDGAEQRAALLAMPGIGPWTAD
YVRMRVLQDPDVLLPGDVAARAGALAAGIPADAAGLTRWAARAAPWRSYLMAHLWYAAPV
TRAWRATPDPIPTEDS |
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| NT seq |
1491 nt +upstreamnt +downstreamnt
atgaccttcgacgagcggtaccgcgcgatcgactcgcgcgacacccgcttcgacgggcag
ttcgtcacggcggtgagatccaccggcatctactgccgccccagctgtccggcgcgcacg
ccgaaggccgccaacgtcacgttctacgccacgtccgccgccgcccacgaggccggctat
cgcgcctgcaagcgctgcctcccggaggccgcgcccggctcgccggagtggaacctccgc
ggcgacgtcgtggcccgggcgatgcgcctcatcgccgacggcatcgtggagcgcgagggc
gtgccggggctggccgcgcgcctcggctactcgccgcgccacctgacccgcctcatcgcc
gccgagctcggagccgggcccctcgctctcagccgcgctcaccgggcgcacaccgcccgc
atgctgctcgtgggcaccgagctgcccgcgtcggaggtggcgttctcggcagggttcgcc
agcatccgtcagttcaacgagaccgtgcgcgaggtcttcgggatgccgcctctcgagctg
cgcgcgcgccgtgccgccgggcggcccgaggctcccgccggccagctcgacctcgtgctg
ccccatcgcggcgagctcgactccgccggcctcttcggctggatggccgcccatgcggtc
gggggagtggagtccggcagcgcgcatcggttcgcccgcacgctgcggctcccgggtggt
ccggcgtggttcgagctgcgcgtcgatgcggacggccgcgtgcgcctccgcgcccagctg
gcggcgctctccgaccttcccgcgatggtgacccgcgcacgccggctgttcgacctcgac
gcggatccggtcgcggtggacgacgcgctgtcgcagcatcccgagctggcccccctcgtc
gcagcggtccccggcgtgcgcgttccgggcgcggtggacccgcacgagatgctcatccgg
gcgatgatcggccagcagatctcggtggccgccgcccgcaccgcgcagacgcggctggcc
gatgcgctgggcgagcgcatgcagacgccccacggggagggcatcctcttcccgacgacc
gccgcgatcgccgagcgcggccacgaggtgctgcgcggacccgctgcgcgcgtgcgctcg
gtcatcggcgcggccgccgctctggccgagggccggctcgatgtcggccccggcgacgac
ggcgcggagcagcgcgcggcgctgctggcgatgcccgggatcggtccgtggaccgcggac
tacgtgcgcatgcgcgtgctgcaggaccccgacgtgctcctgccgggcgacgtcgcggca
cgcgccggggcgctcgccgccggcatccccgcggacgctgccggactcacccgctgggcc
gcccgcgcggccccctggcgcagctacctgatggcgcacctctggtacgccgcgcccgtc
acgcgcgcgtggcgggcgacccccgacccgattccgacggaggactcatga |
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