Microbacterium lemovicicum: CVS47_00932
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Entry
CVS47_00932 CDS
T06301
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mlv
Microbacterium lemovicicum
Pathway
mlv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CVS47_00932 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlv03021
]
CVS47_00932 (rho)
03019 Messenger RNA biogenesis [BR:
mlv03019
]
CVS47_00932 (rho)
Transcription machinery [BR:
mlv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CVS47_00932 (rho)
Messenger RNA biogenesis [BR:
mlv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CVS47_00932 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
NACHT
Spore_III_AA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AZS36331
UniProt:
A0A3Q9IYD9
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All DBs
Position
997743..1000073
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AA seq
776 aa
AA seq
DB search
MESISEIHAAEPSADERVDASATEENGTGASNADTTTAPADDAPADEAAEVEPAEDETAE
VAPDAATETAADASAADAVAADAAPAEPVADAPAEDPTPADVPVETAEAVADEKPAKAPR
KRAPRRAKSSDLPAAPAETAAETPAAETAAGATDAAPAEAAASDAVASDTASSDAGAPAE
TADASAASETAAADSTSSDEAPAATTERAPARSGRSTGRGRNARAAQAPADETEAADAAP
AADDAQPTADADADERTQNTSASNAQNTQGDDDGADANGDGDGSDSGSNRGRSRSRNRSR
SRGGNANGNANGNAPQNGNVQNGNAQQGNAPQTAQGGNVPAQAQADQDDAPVNGRGRQQQ
QQRNNNAKRRGAPNANGDEFETEITEDDVLIPIAGILDVLDNYAFVRTSGYLPGTSDVYV
SLGQVKKYNLRKGDAVVGAIKQPREGEQSTRQKYNALVKVDSVNGLSAEDAGDRVEFGKL
TPLYPQDRLRLETAPEKLTQRIIDLVAPIGKGQRGLIVAPPKAGKTIVLQQIANAIATNN
PEVHLMVVLVDERPEEVTDMQRTVKGEVIASTFDRPAEDHTTVAELAIERAKRLVELGRD
VVVLLDSITRLGRAYNISAPTSGRVLTGGVDASALYPPKRFFGAARNIENGGSLTILATA
LVETGSKMDEVIFEEFKGTGNSELRLSRQLADKRIFPAVDVNASSTRREEMLLSADEVKI
TWKLRRALAGLDTQQALEVVLGKLKETSSNVEFLVQMQKSIPTPTGHSHGHENNIR
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
gtggagtccatctccgagatccatgctgctgagccttcggccgacgagcgcgtagacgcg
tccgccaccgaggagaacggcaccggcgcttcgaacgccgacaccaccaccgctccggcg
gacgacgctccggccgatgaggccgcggaggtcgagcccgccgaggacgagaccgctgag
gtcgctccggatgctgcgaccgagaccgccgcggacgcttcggctgccgacgctgtcgct
gccgacgctgctccggccgagccggtcgccgacgctccggctgaggacccgacgccggcc
gacgtgcccgtcgagacggccgaggccgtcgccgacgagaagccggccaaggcgccgcgc
aaacgcgccccgcgccgggccaagagctccgacctgcccgccgctccggccgagaccgcg
gccgagacgccggctgccgagaccgccgccggcgcgaccgacgccgctccggccgaggcc
gcggcatccgacgccgttgcctccgacaccgcttcttcggacgccggcgctccggccgag
acggccgacgcctccgctgcgtccgagaccgccgccgccgacagcacgtcgtccgacgag
gcgcccgccgccacgaccgagcgcgcccccgcccggtcgggtcgctcgaccggccgcggc
cgcaacgcccgcgccgcgcaggcgcctgccgacgagaccgaggctgctgacgccgccccg
gccgccgacgacgcgcagcccaccgctgacgccgacgccgacgagcggactcagaacacg
tcggcctcgaacgcccagaacacccagggcgacgacgacggcgccgacgcgaacggcgac
ggcgacggatccgactccgggtccaaccgcggacgcagccggagccgcaaccgcagccgc
agccgtggcggcaacgccaacggcaacgccaacggcaacgcgccccagaacggcaacgtc
cagaacggcaacgcccagcagggcaacgccccgcagacggcacagggcggcaacgtcccc
gcgcaggcacaggccgaccaggacgacgctccggtcaacggccgcggccggcagcagcag
cagcagcgcaacaacaacgccaagcgtcgcggtgcgcccaacgccaacggcgacgagttc
gagaccgagatcaccgaggacgacgtcctcatcccgatcgccggcatcctcgacgtgctc
gacaactacgccttcgtccgcaccagcggctacctccccggcacgagcgacgtctacgtc
tcgctcggccaggtgaagaagtacaacctccgcaagggcgacgccgtcgtcggcgcgatc
aagcagccgcgcgagggcgagcagtccacccgccagaagtacaacgcgctggtcaaggtc
gactcggtcaacggcctctcggccgaagacgccggcgaccgcgtcgagttcggcaagctc
acgccgctctacccgcaggaccgcctgcgcctcgagacggctcccgagaagctgacgcag
cgcatcatcgacctcgtggcgccgatcggaaagggccagcgcggcctcatcgtcgcgccc
cccaaggccggcaagaccatcgtgctgcagcagatcgccaacgcgatcgcgacgaacaac
cccgaggtgcacctcatggtcgtgctcgtcgacgagcggcccgaagaggtcaccgacatg
cagcgcaccgtgaagggcgaggtcatcgcctcgaccttcgaccgccccgcggaagaccac
accacggtcgccgagctcgccatcgagcgcgcgaagcgcctcgtggagctcggtcgcgac
gtcgtcgtgctgctcgactcgatcacccgtctgggccgcgcgtacaacatctccgcgccg
acctccggccgcgtgctgaccggcggcgtcgacgcttcggcgctgtacccgcccaagcgc
ttcttcggcgccgcgcgcaacatcgagaacggcggatcgctcaccatcctcgcgaccgcg
ctcgtggagaccggttccaagatggacgaggtcatcttcgaggagttcaagggcaccggc
aacagcgagctgcgcctgtcgcgccagctggccgacaagcggatcttccccgcggtcgac
gtcaacgcctccagcacgcgccgcgaggagatgctgctgtcggccgacgaggtcaagatc
acctggaagctgcgtcgcgccctcgccggcctcgacacgcagcaggccctcgaggtcgtg
ctcggcaagctcaaggagacctcgagcaacgtcgaattcctcgtgcagatgcagaagtcg
atcccgacgccgaccggccacagccacgggcacgagaacaacatccgctga
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