KEGG   Microbacterium lemovicicum: CVS47_01063
Entry
CVS47_01063       CDS       T06301                                 
Symbol
rnj
Name
(GenBank) Ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mlv  Microbacterium lemovicicum
Pathway
mlv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mlv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CVS47_01063 (rnj)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mlv03019]
    CVS47_01063 (rnj)
Messenger RNA biogenesis [BR:mlv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CVS47_01063 (rnj)
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: AZS36462
UniProt: A0A3Q9J063
LinkDB
Position
1141481..1143157
AA seq 558 aa
MPTDVYDPPALAPGTLRVIPLGGLGEIGRNMTVFEYEGKLLVVDCGVLFPEEHQPGVDLI
LPDFEPIKKRLNDIVGVVLTHGHEDHIGAVPYLLKLKGDIPLIGSGLTLALVEAKLKEHR
IKPYTLTVKEGDHEKLGPFDLEFIAVNHSIPDALAVAIRTPAGLVLATGDFKMDQLPLDG
RLTDLRSFARLGEEGVDLFLVDSTNADVPGFTPLEREIGPVLDQIIGRAPRRVIIASFSS
HVHRVQQVLDAAAAHGRRVALLGRSMVRNMGIAEDLGYLHVPQGILIDYKKARDLPDDKI
VYMSTGSQGEPMAVLSRMANLDHEIQPGPGDTVILASSLIPGNENAVYRVIDGLTKLGAN
VVHKANAKVHVSGHAAAGELLYCYNILTPRNVLPIHGEFRHLMANARLAQDSGVPAERTI
LGENGTVIDLADGVATVTGQLDIGFVYVDGSTVGEITDADLKDRRTLGEEGFISVIVVVD
SATGKIITGPEIHARGFAEDDAVFNAVKPKIAAALAEAANSGVRDTHALSQVVRRTIGRW
VNQSLRRRPMIVPLVIEA
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgcccactgacgtctacgatccgcccgcactcgccccggggacgctgcgcgtcatcccg
ctcggcggcctcggcgagatcggccgcaacatgaccgtgttcgagtacgagggcaagctc
ctcgtcgtcgactgcggcgtgctgttccccgaggagcaccagcccggggtcgacctgatc
ctccccgacttcgagcccatcaagaagcgcctcaacgacatcgtcggcgtcgtgctcacg
cacggccacgaggaccacatcggcgccgtgccctacctcctcaagctcaagggagacatc
cccctcatcggctccgggctgaccctcgcgctggtggaggcgaagctcaaggagcaccgc
atcaagccgtacacgctgacggtgaaggagggcgaccacgagaagctcgggccgttcgac
ctcgagttcatcgcggtcaaccactccatccccgatgcgctcgccgtcgcgatccgcacg
cccgccggtctggtgctggccaccggcgacttcaagatggaccagctgcccctcgacggc
cgcctcaccgacctccgctccttcgcgcggctgggcgaggagggtgtcgacctcttcctc
gtggactcgaccaacgccgacgtcccggggttcacgcctctcgagcgcgagatcgggccg
gtgctcgaccagatcatcggacgcgccccgcgacgggtcatcatcgcgagcttctccagc
cacgtgcaccgtgtgcagcaggtgctggatgcggcagccgcccatggccgcagggtcgcg
ctcctcggccgcagcatggtgcgcaacatgggcatcgccgaggacctcggctacctccac
gtgccgcagggcatcctgatcgactacaagaaggcccgcgacctgcccgacgacaagatc
gtctacatgtccaccgggtcgcagggcgagccgatggccgtgctcagccgcatggccaac
ctcgaccacgagatccagccgggtcccggcgacaccgtgatcctggcttccagcctcatc
ccgggcaacgagaacgcggtgtaccgcgtcatcgacggcctgaccaagctgggcgcgaac
gtcgtgcacaaggccaacgccaaggtgcacgtgtcgggccacgccgcggcgggggagctg
ctctactgctacaacatcctcactccgcgcaacgtgctgccgatccacggcgaattccgt
cacctgatggccaacgcccggctcgcccaggacagcggcgtgcccgccgagcgcaccatc
ctcggtgagaacggcacggtcatcgacctcgccgacggcgtcgcgaccgtcaccggtcag
ctcgacatcggcttcgtctacgtcgacggctcgacggtcggcgagatcaccgacgccgac
ctcaaggaccgcaggacgctcggcgaggaggggttcatctccgtcatcgtcgtggtcgac
tcggccaccggcaagatcatcaccggtcccgagatccacgcccgcgggttcgcggaggac
gacgcggtgttcaacgccgtgaagcccaagatcgccgcagccctggccgaggcggcgaat
tcgggggtgcgcgacacgcacgcgctgtcgcaggtcgtgcgccgcacgatcggccgctgg
gtcaaccagtcgctgcgccgtcgtccgatgatcgtgccgctcgtcatcgaggcctga

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