Microbacterium lemovicicum: CVS47_01341
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Entry
CVS47_01341 CDS
T06301
Symbol
recQ_3
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mlv
Microbacterium lemovicicum
Pathway
mlv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CVS47_01341 (recQ_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlv03019
]
CVS47_01341 (recQ_3)
03400 DNA repair and recombination proteins [BR:
mlv03400
]
CVS47_01341 (recQ_3)
Enzymes [BR:
mlv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CVS47_01341 (recQ_3)
Messenger RNA biogenesis [BR:
mlv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CVS47_01341 (recQ_3)
DNA repair and recombination proteins [BR:
mlv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CVS47_01341 (recQ_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
PcrA_UvrD_tudor
Cas3-like_C_2
DUF3553
NADH_4Fe-4S
Motif
Other DBs
NCBI-ProteinID:
AZS36732
UniProt:
A0A3Q9IXT1
LinkDB
All DBs
Position
1431994..1433658
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AA seq
554 aa
AA seq
DB search
MRLSAHRAEDALGADRIDRAASELFGWESVRDGQRRSVEALLEGRDVVAVMPTGAGKSAV
YQLAGALRDGLTLVVSPLIALQTDQLEQLSAAPAAPRGAAVNSSLGARAIEDAWAQAESG
GIRFLFLAPEQLAKDEVLDRLAGLDVGLLVVDEAHCVASWGHDFRPDYLRLGDARERLGG
PPTVALTATAAEPVREEIVRRLSLEDPLLVVQGVDRPHIDLEVRRHADEPEKRQHLLDLV
AVLDGCGLVYAATRRDAEEYASALAERGIRSLAYHAGLPAKDRRTVQEAFHVGDVDVVVA
TSAFGMGIDKPDVRFVVHASVPESLDAYYQEVGRAGRDGEAARAVLFYRSEDLGIRKYFT
SRTVDQARLRAAYKAVVAAGAPIRAAALALAVRVSSRAITGIVNLLVEAGAVRVTRAGIE
AVGALTTRQVVARSVEASDRRERIEVSRLEVMRRYAETRDCRRRVLLSYFGDELDEPCGR
CDTCRAGTASVHEEELDAATAPFPSGSTVRHAAWGEGSVVEVDPDRLTVFFPSEGYKVLA
LDVVQEGDLLRRVA
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgagactgagtgctcatcgagcggaggacgcgttgggcgcagacaggatcgaccgggcg
gcgagcgagctgttcgggtgggaatcggtgcgggacgggcagcggcgcagcgtcgaggcg
ctgctggaaggccgcgatgtcgtcgcggtgatgccgaccggcgccgggaagtccgcggtg
taccagctcgccggagcgctgcgcgacgggctgacgctggtcgtctcgcccctcatcgcg
ctgcagacggaccagctcgagcagctgtccgcggcgccggccgccccgcggggcgcggcg
gtcaactcgtcgctcggcgcgcgggcgatcgaggatgcctgggcgcaggccgagtcgggc
ggcatcaggttcctcttcctcgcgcccgagcagctggcgaaggacgaggtgctcgaccgg
ctcgccggcctcgacgtgggtctgctcgtcgtcgacgaggcccactgcgtggcctcctgg
ggtcacgacttccggcccgactacctgcggctcggcgacgcgcgcgagcggctcggcgga
ccgccgaccgtggcgctcaccgcgacggcggccgagccggtgcgcgaggagatcgtccgg
cgcctgtcgctcgaggacccgctgctcgtggtgcagggcgtcgaccgcccccacatcgac
ctcgaggtgcgccggcacgccgacgagcccgagaagcggcagcatctgctcgacctcgtg
gcggtgctcgacggctgcggactcgtctacgcggccacgcggcgcgatgccgaggagtac
gcctccgcgctggccgagcgcggcatccgctccctcgcctatcacgccgggcttccggcg
aaggaccgtcgcacggtgcaggaggcgttccacgtcggtgacgtcgatgtggtcgtcgcc
accagcgcgttcgggatgggcatcgacaagcccgacgtccgcttcgtcgtgcacgcctcg
gtccccgagtcgctcgacgcctactaccaggaggtcggtcgcgccggacgcgacggcgag
gctgcgcgggccgtgctgttctaccgctccgaagacctcggcatccggaagtacttcacc
tcccgcaccgtcgaccaggcccgcctgcgggccgcgtacaaggcggtcgtggccgccggt
gcgccgatccgcgccgctgcgctggccctggcggtgcgggtgtcgtcccgagcgatcacg
gggatcgtgaacctcctcgtcgaggcgggcgcggtgcgcgtgacgcgggcgggcatcgag
gcggtcggcgcactcaccacgcgtcaggtcgtcgcgcgctccgtggaggcctccgatcgg
cgggagcgcatcgaggtgtcgcggctcgaggtcatgcgccgctacgccgagacgcgggac
tgccggcgccgcgtgctgctgtcgtatttcggtgacgagctcgacgagccctgcgggcgc
tgcgacacgtgccgggccggcaccgcgtcggtgcacgaggaggagctggatgccgcgacc
gccccgttcccgtcgggctcgacggtgcgccacgcggcgtggggcgagggcagcgtcgtg
gaggtggaccccgaccgcctgaccgtgttcttcccgtcggaggggtacaaggtgctcgcc
ctggacgtggtgcaggagggcgacctgctgcgacgagtggcgtga
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