Microbacterium lemovicicum: CVS47_01831
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Entry
CVS47_01831 CDS
T06301
Symbol
rep_1
Name
(GenBank) ATP-dependent DNA helicase Rep
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mlv
Microbacterium lemovicicum
Pathway
mlv03420
Nucleotide excision repair
mlv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mlv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CVS47_01831 (rep_1)
03430 Mismatch repair
CVS47_01831 (rep_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlv03400
]
CVS47_01831 (rep_1)
Enzymes [BR:
mlv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CVS47_01831 (rep_1)
DNA repair and recombination proteins [BR:
mlv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CVS47_01831 (rep_1)
MMR (mismatch excision repair)
Other MMR factors
CVS47_01831 (rep_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AZS37199
UniProt:
A0A3Q9IZQ4
LinkDB
All DBs
Position
complement(1934391..1937810)
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AA seq
1139 aa
AA seq
DB search
MSERENVATVASAASAPADPTAPASAGASTADASMHADAAPPALSAAVIAAALGQFPPTL
EQTAVIEAPLAPALVVAGAGSGKTETMAARVVWLVANGIVRRDEVLGLTFTRKAAGELAE
RIQKRLARLSEFERRGLLPALPALHREGLLDVFGRLEREGAPDAARAAAMAELAERAGAV
PVDAGDDALLHRPTVSTYNSFADAIVREHAVRIGWDAEAAILSESAAWLLMRRVVFGSDD
PRLEERQEALRSIIDGALRIARDSVDNLVDLDELEAFPEAFADVRERPSTRRATVVYADI
ATAADNVTALQLLAGLARQYAAEKQRLGVLDFSDQVAGAMRIVRSHRAVVDELRARYRVV
LLDEYQDTSVVQTDLLATLFGGTGVMAVGDPHQAIYGWRGASAGNLGGFPAAFAPGAICA
RFALATSWRNSSRVLDAANAVLAPLAASAPVPVEELRSRPGAPGGDVEVVFEADIDAEAD
RVACWFHRVRDDRASEGRPTSGAVLFRNKKHMVRFGDALGRRGIPHRILGLGGLLSTPEV
VDVVSALRVMVDPSAGSALIRLLAGPRWSIGLADLRVLAQLARRIARHDAALQPLTPEVA
EQVRAGAGEDQGSLVDALDFVLQHRGDHGWLEEFTPGARERLRDAASVFAGLRQAAGMPV
PELVRLIELELRLDIELAANEARGPARIASAQLRAFVDELHGFLAADESGSLSSLLAWLD
HAEQLDEFAPRTEPPEDDVVQLLTIHGSKGLEWDAVAVVRLVKDELPSAARDTKAWLGFG
VLPYAFRGDSAWLPAFRWEAHDAPTQQDLKDALETFVAANRARQLEEDRRLAYVAVTRAR
DHLLLSGASWSGTKKPRERSAFLAEMAEALEVELPDDDPGDDPYLGERRTLEWPIDPLGE
RRDRVLRAADEVRLALERERPEPDADVRLLLAERAARAAPATGSAPTRIPASRYKEFVTD
YEGTVAKLARPLPERPFRQTRLGTLFHAWVEARSGSVGTSGSLDDGLWESDEETSASAAA
AEDAADLTRLQENFEGSEWAILQPIEVETEIDFAHSGLDGEPHVVICKLDAVYRRDDRGG
RIEIVDWKTGRPPASDAEKDERMLQLELYRLAYAQKHGIPEREIDVALYYVAHDLVLRG
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcgggagaacgtggcgacggtggcttccgcggcgtcggcgcctgcggacccg
acggcgccggcgtcggcgggcgcttccacggcggatgcctcgatgcacgcggatgctgcg
cccccggcgctctcggcggccgtgatcgccgccgcgctcgggcagttcccgccgaccctc
gagcagaccgccgtcatcgaggcgccgctggctcccgcactcgtggtggccggcgcgggc
agcggcaagaccgagacgatggcggcacgggtggtgtggctcgtggcgaacggcatcgtt
cgccgcgacgaggtgctcggcctcaccttcacccgcaaggccgcgggcgagctggccgaa
cgcatccagaagcgcctggcacgcctgtcggagttcgagcgtcgcggtctcctccccgcc
cttcccgcgctccaccgggaggggctcctcgacgtcttcggccggctggagcgcgagggc
gcgcccgacgccgcgcgggctgcggcgatggcggagctggccgaacgagccggtgcggtg
cccgtcgacgcgggcgacgacgcgttgctgcaccgtccgaccgtctcgacctacaacagc
ttcgccgacgcgatcgtgcgggagcacgcggtgcgcatcggctgggacgcggaggcggcg
atcctctcggagtccgctgcctggctcctcatgcggcgtgtggtgttcggttccgacgat
ccccgcctcgaggagcggcaggaggccctgcgctccatcatcgacggcgcgctccgcatc
gcccgcgacagcgtcgacaacctcgtcgacctcgacgagctcgaggcgttccccgaggcc
ttcgccgatgtccgcgagcgaccctcgacgcggcgcgcgaccgtcgtctacgccgacatc
gccacggcggccgacaacgtcaccgccctgcagctcctggcgggcctcgctcggcagtac
gccgcagagaagcagcgcctcggcgtcctggacttctccgaccaggtcgcgggcgcgatg
cgcatcgtccgctcgcaccgggccgtcgtcgacgagctgcgggcccggtaccgcgtggtg
ctgctggacgagtaccaggacacgtcggtcgtgcagaccgacctgctcgcgacgctgttc
ggcggaaccggggtgatggcggtcggcgacccccaccaggccatctacggctggcggggg
gcgagcgccggcaacctcggcggcttccccgccgccttcgcgccgggcgcgatctgcgcg
cggttcgccctcgccacgagctggcgcaacagctcgcgcgtgctggacgccgcgaatgcc
gtgctcgctccgctggcggcgtccgcgccggtgccggtggaggagctgcggtcgcgtccc
ggcgcccctgggggagatgtcgaggtcgtgttcgaggccgacatcgacgccgaggccgat
cgtgtggcctgctggttccaccgcgtccgcgacgaccgcgcttccgaggggcgaccgacg
tcgggcgccgtgctgttccgcaacaagaagcacatggtgcgcttcggcgacgcgctggga
cggcgcggcatcccgcaccgcatcctcggcctcggcgggctgctctccacgcccgaggtg
gtcgacgtggtctcggcgctgcgggtcatggtcgacccgtccgcgggctccgcgctcatc
cgcctcctcgccgggcctcgctggagcatcggtctggccgacctgcgggtgcttgctcag
ctcgcgcgccgcatcgcccgccacgacgccgccctgcagccgctcacccccgaggtggcc
gagcaggtcagggcgggagcgggggaggaccaggggtcgctcgtcgacgccctcgacttc
gtgctgcagcaccgcggcgaccacggctggctggaggagttcaccccgggcgcccgcgag
aggctgcgggacgcggcatccgtcttcgcgggtctgcggcaggccgcgggcatgccggtg
cccgagctcgtgcgactcatcgagctcgagctgcggctcgacatcgagctggccgccaac
gaggcccgcgggccggcgcgcatcgcgtcagcccagctgcgcgccttcgtcgacgagctg
cacggcttcctggccgccgacgagagcggctcgctgtcgagtctcctggcctggctcgac
cacgccgagcagctcgacgagttcgccccgcgtacggaaccacccgaggacgacgtcgtg
cagctgctgacgatccacggctcgaagggcctggagtgggacgccgtggccgtcgtgcgg
ctcgtcaaggacgagctgccctcggccgcgcgtgacacgaaggcgtggctggggttcggg
gtgctgccctatgcgttccgcggcgacagcgcgtggctccccgcgttccggtgggaggcc
cacgacgcgccgacccagcaggatctcaaggacgcgctcgagaccttcgtcgcggccaac
cgcgcccgtcagctcgaggaggaccggcgtctcgcctacgtggccgtcacccgcgcgcgc
gatcacctgctgctcagcggtgcgagctggtcgggcaccaagaagccgcgggagcgcagc
gcgttcctcgccgagatggccgaggccctcgaggtcgagctccccgacgacgacccggga
gatgatccctacctgggagagcggcgcacgctcgagtggcccatcgatccgctcggcgag
cggcgcgaccgggtgctgcgcgcggccgacgaggtgcgtctggccttggagcgggagcgc
ccggagccggatgccgacgtccggctgctcctggccgagcgggcggcacgcgcggcaccc
gccacagggtcggcaccgacgcgcatcccggcgtcgcgctacaaggagttcgtcaccgac
tacgagggaacggtcgcgaagctggcccggccgctgcccgagcgccccttccgccagacg
cggctcggcacgctcttccatgcctgggtggaggcgcgctccggctccgtcggcacgagc
ggctccctcgacgacggcctgtgggagagcgacgaggagacgtcggcgtcggcggccgcc
gcggaggatgcggctgacctgacccgtctccaggagaacttcgaaggctccgagtgggcg
atcctccagccgatcgaggtggagaccgagatcgacttcgcgcactccggcctcgacggc
gagccgcacgtcgtcatctgcaagctcgacgcggtctaccgtcgggacgaccgcggcggc
cggatcgagatcgtcgactggaagacgggccggccaccggcatccgatgccgagaaggac
gaacggatgctgcagctcgagctctaccggctggcgtatgcgcagaagcacggtatcccc
gaacgtgagatcgacgtggcgctgtactacgtcgcgcacgacctcgtgctgcgcggctga
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