Microbacterium lemovicicum: CVS47_02008 Help Entry CVS47_02008       CDS       T06301                                  Name (GenBank) hypothetical protein   KO K03578   ATP-dependent RNA helicase HrpA [EC:5.6.2.6] Organism mlv  Microbacterium lemovicicum Brite KEGG Orthology (KO) [BR:mlv00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:mlv03019]     CVS47_02008 Enzymes [BR:mlv01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      CVS47_02008 Messenger RNA biogenesis [BR:mlv03019]  Prokaryotic type   Bacterial mRNA degradation factors    Other RNA degradation factors     Others      CVS47_02008 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DUF3418 OB_NTP_bind Helicase_C DEAD HA2_C AAA_19 AAA_22 HA2_N T2SSE ResIII UvrD-helicase AAA_30 nSTAND3 NACHT SLFN-g3_helicase SRP54 FtsK_SpoIIIE Zeta_toxin AAA_23 MoCF_biosynth Motif Other DBs NCBI-ProteinID:  AZS37372 UniProt:  A0A3Q9IYV2 LinkDB All DBs Position 2116082..2120059 Genome browser AA seq 1325 aa AA seqDB search MSVPEPVLFFPPELPVSGAREEIARAIRESQVVIVAGATGSGKTTQLPKICLELGRTRIA HTQPRRIAARTIAERIAEEMHVPLGTTVGYKVRFTDKVQDDTRVALMTDGILLNEIHRDR LLRKYDTIIVDEAHERSLNVDFLLGYLRRILPRRPDLKVIVTSATIDPESFAKHFADAAG TPAPIVEVSGRTYPVEIRYRGHEDADAEEDDDETDAPAKGRAKPSRRRSPSTARDDDEDD VGAIVAALRELDREAPGDVLVFLPGEAEIRDAAEAVRGAYAGDAAPTEVLPLYGRLSSAE QHRVFERSTVPGVRRRVILATNVAETSLTVPGIRYVVDTGTARISRYSSRTKIQQLPIEA ISQASAQQRSGRAGRTADGIAIRLYAEDDFARRPEYTEPEILRTSLASVILQMLSLGFGD ISAFPFLTPPDSRGVKAALELLVELGAVEAGGRSERSATLTERGREISRLPIDPRFARML LEARATGVLPTVLAIVAGMSIQDVRERPEERREEADRLHARFVDPSSDFLTLLNLWNHLQ EQQSALGSSAFRRLCRSEHLNYVRVREWVDVHRQLRSLIGAGRGSDRDGVTAGDPDTVHR AILSGLLSQIGVLDERTKAKAPAGGRPAPGEYVGARGARFAIFPGSGLKKKRPSAVMAAE LVETSRLFARTVAAIDPAWAEPLAGDLVKRQLSDPHWSKDAGAAVAAEKVTLFGVEIVPR RRVQLARFDRALARELFVRHALVEEEWDVSALDKRLTAFLRRNVEQRRRLEKIEERERRR DILVGDEAVFAFYDGRVPHDVFDARSFETWWKDAAARTPRLLDLTEADLLEGGARRDDRD FPARWTQGDQVLTLAYRFEPGAPDDGVTVVVPLALLAQLRPDGFDWQVPGLRDELVTALL RALPKVIRRNVVPAADWAATFADELAGQGPESHDGMPELTLRQALARLVQRVANQRVSED DFEVERVPGHLQVSFRAVDERGRTVGSDRDLVALQQRLAGRARTTVERSLERSREPGAVT RPAAAHAGPPLPAGAPLVRSGLTDWTIDYLPEVVDTRVAGGVVRGYPALHDEGATVAVRI ETTPEEAARTTRAGVRRLLLLNVASPAPYVLEHLTSAEKLVLAASPYPSAKALIEDARLA VADAVLDRVAPDGIVRTKADFTRVRDELSSVVVDELFRTVSLTARILTLSREVDRAVRGQ NSLTLLGALNDVRGQLAGLIFPSFVSRTGIARLAHLPRYLQGMVDRVTGLTDNPGRDRQR MTEFERAAALYADAGGTIPLAADAAPALARARWLLEEHRISLFAQRLGTAEPVSLQRLTK TLAGG NT seq 3978 nt NT seq  +upstreamnt  +downstreamnt atgtccgtcccggaacccgtcctcttcttcccgccggagctgcccgtcagcggcgcgcgc gaggagatcgcgcgcgccatccgcgagtcgcaggtcgtgatcgtcgcgggcgccacgggg tcgggcaagacgacgcagctgccgaagatctgcctcgaactgggccgcacgcgcatcgcg cacacacagccgcgccgcatcgcggcccgcacgatcgccgagcgcatcgccgaggagatg cacgtgccgctcggcaccaccgtcggctacaaggtgcgcttcaccgacaaggtgcaggac gacacccgcgtcgcactgatgaccgacggcatcctgctcaacgagatccaccgcgaccgc ctgctgcgcaagtacgacacgatcatcgtcgacgaggcccacgagcggtcgctgaacgtc gacttcctgctcgggtacctgcgccgtatcctcccccggcgccccgatctcaaggtcatc gtcacgagcgcgaccatcgaccccgagagcttcgcgaagcatttcgcggatgccgcgggc acgcccgcgccgatcgtcgaggtgtcggggcgcacgtacccggtggagatccgctaccgc ggacacgaggacgccgacgccgaagaggacgacgacgagacggacgcgccggcgaagggc cgcgcgaagccgagccggcgccggtcaccgtccacggcccgcgacgacgacgaggacgac gtcggagccatcgtcgcggcgctgcgcgagctggatcgcgaagccccgggcgatgtgctg gtcttcctccccggcgaggccgagatccgcgacgcggcggaggccgtccgcggcgcctac gccggagacgcggcgcccacggaggtactcccgctctacggtcgcctgagctcggccgag cagcaccgggtgttcgagcgctccaccgtgcccggcgtccgacgccgggtcatcctggcc acgaacgtcgccgagaccagcctcaccgtccccggcatccgctacgtcgtcgacaccggc acggcgcgcatctcgcgctacagcagccgcacgaagatccagcagctccccatcgaggcc atctcgcaggcgtcggcgcagcagcgctccggacgcgcgggccgcacggccgacggcatc gcgatccggctctacgccgaggacgacttcgcccggcgcccggagtacaccgagcccgag atcctccgcacgagcctggcgtccgtcatcctgcagatgctctcgctcggcttcggcgac atctccgcgttcccgttcctgacgccgcccgactcgcgcggcgtcaaggcggccctcgag ctgctcgtcgagctgggcgccgtcgaggctggcggtcggagcgagcggagcgcgaccctg accgagcgcggccgcgagatctcccgcctgcccatcgacccgcgcttcgcgcgcatgctg ctcgaggcccgcgcaaccggcgtgctgccgacggtcctcgcgatcgtggcgggcatgtcg atccaggacgtccgcgagcgccctgaagagcgccgagaggaagccgaccgcctgcacgcg cggttcgtcgacccgtcaagcgacttcctcacgctcctgaatctctggaaccacctgcag gagcagcagtccgcactcgggtccagcgcgttccgccggctgtgccggtcggagcacctg aactacgtgcgggtccgcgaatgggtggacgtgcaccgccagctgcgctctctcatcggc gccggtcgcggatcagatcgcgacggcgtgacggcgggcgaccccgacaccgtgcaccgc gcgatcctgtcgggactgctgtctcagatcggcgtgctcgacgagcgcacgaaggcgaag gctccggccggcggacgccccgctcccggggaatacgtcggcgcccgcggcgcacgcttc gcgatcttcccggggtcgggcctgaagaagaagcggccgtccgccgtgatggcggcggaa ctcgtcgagacgtcccgcctcttcgcccgcaccgtcgccgcgatcgatcccgcgtgggcg gagccgctggccggcgacctcgtgaagcgtcagctcagcgacccgcactggtcgaaggac gccggcgctgcggtcgccgccgagaaggtcacgctcttcggcgtcgagatcgtgccgcga cgccgggtgcagctcgcccgcttcgatcgggcgctcgcccgcgagctcttcgtccggcac gccctcgtcgaggaggagtgggacgtctccgcactcgacaagcgcctcaccgccttcctc cgccgcaacgtcgagcagcgccgccgcctcgagaagatcgaggagcgcgagcgtcgccgc gacatcctcgtcggcgacgaggcggtcttcgcgttctacgacgggcgcgtgccccacgac gtcttcgacgcccgctcgttcgagacgtggtggaaggatgccgcagcccgcacgccacgg ctgctcgacctgacggaggccgacctgctcgagggcggtgcccgccgcgacgatcgcgac ttccccgctcgatggacgcagggcgatcaggtgctcaccctggcctaccgcttcgagccc ggagcgcccgacgacggcgtgaccgtcgtcgtgccgctggcgctgctcgcgcagctccgc ccggacggcttcgactggcaggtgcccggtctccgcgacgagctggtgaccgcgctgctg cgcgcgctgccgaaggtcatccgccgcaacgtcgtccccgccgcggactgggccgccacc ttcgccgacgagctcgccgggcagggcccggaatcccacgacgggatgccggagctcacg ctccgtcaggcgctcgcccgactcgtgcagcgcgtcgcgaaccagcgcgtgtcggaggac gacttcgaggtcgagcgggtgcccgggcacctgcaggtctcgttccgcgcagtggacgag cgcggacgcaccgtgggctccgaccgcgacctcgtcgcgctccagcagcggctcgccggc cgcgcgcgcaccacggtcgaacgctcgctggagcggtcccgcgaacccggcgccgtgacg cggccggccgccgcccacgccggtccgccgctcccggccggcgcgcccctcgtacgctcc ggactcaccgactggacgatcgactacctgcccgaggtcgtcgacacgcgcgtggccggc ggcgtcgtgcgcggatacccggcgctccacgacgagggggcgacggtcgccgtccgcatc gagacgaccccggaggaggccgcgcgcacgacgcgggcgggcgtacggcggctgctgcta ctgaacgtcgcctcccccgcgccgtacgtcctggagcatctcacctccgccgagaagctg gtgctcgccgcgtcgccgtacccgtccgccaaggcgctgatcgaggacgcccggctggcc gtcgccgatgccgtcctcgatcgcgtcgccccggatggaatcgtgcgcaccaaggccgac ttcacgcgcgtgcgcgacgagctctcgtcggtggtcgtcgacgagctgttccggacggtg tcgctgaccgcgcgcatcctgaccctctcgcgcgaggtggaccgcgctgtgcgcggccag aactcgctgaccctgctgggggcgctcaacgacgtccgcgggcagctggccggcctcatc ttcccgtccttcgtctcgcgcaccggcatcgcccgcctcgcgcacctgccgcgatacctg cagggcatggtcgaccgggtgaccgggctcaccgacaatcccggacgcgaccgccagcgc atgacggagttcgagcgggcggccgccctctacgccgatgccggcggcacgatccccctc gctgccgacgcggcgccggccctcgcccgcgcgcgctggctgctggaggagcaccggatc agcctgttcgcacagcggctcggcaccgccgagcccgtctcgctgcagcgcctcaccaag accctcgcgggcgggtga

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