Mycobacterium lentiflavum: MJO58_04565
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Entry
MJO58_04565 CDS
T08800
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mlw
Mycobacterium lentiflavum
Pathway
mlw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mlw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MJO58_04565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlw03021
]
MJO58_04565
03400 DNA repair and recombination proteins [BR:
mlw03400
]
MJO58_04565
Enzymes [BR:
mlw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MJO58_04565
Transcription machinery [BR:
mlw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MJO58_04565
DNA repair and recombination proteins [BR:
mlw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MJO58_04565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ULP43266
LinkDB
All DBs
Position
935373..939323
Genome browser
AA seq
1316 aa
AA seq
DB search
MLDVNFFDELRIGLATAEDIRQWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITAVDDEMRHNELSTLEAEMVVERKAVEDQRDADLEARAQKLEAD
LAELEAEGAKADARRKVRDGGEREMRQLRDRAQRELDRLEDIWTTFTKLAPKQLIVDENL
YRELVDRYGEYFTGAMGAESIQKLIENFDIDAEADILRDVIRNGKGQKKLRALKRLKVVA
AFQQSGNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPMLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYYLTTEVAGAEGEYR
AAADDQPEQGVYSSPAEAIMASDRGLLSVRAQIKVRLTQLRPPAEIEVELFGQNGWRPGD
AWLAETTLGRVLFNELLPLGYPFVNKQMHKKVQAAIINDLAERYPMIVVAQTVDKLKDAG
FYWATRSGVTVSMADVLVPPRKKEILDHYEDRADKVEKQFQRGALNHDERNEALVEIWKE
ATDEVGKALREHYPADNPIITIVDSGATGNFTQTRTLAGMKGLVTNPKGEFIPRPVKSSF
REGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREHDCETERGIIVE
LAERQPDGTLIRDPYIETSAYARTLGADAVDEAGNVVVARGEDLGDPSIEALLAAGITQI
KVRSVLTCTTGTGVCATCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGV
GEDITGGLPRVQELFEARVPRGKAPIADVTGRVQLEDGERFYKITIVPDDGGEEVVYDKL
SKRQRLRVFKHEDGSERVLSDGDHVEVGQQLMEGSADPHEVLRVQGPREVQIHLVREVQE
VYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLIDRAEFEAENRRVVAEGGEP
AAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLNGLKENVIIGKLIPA
GTGINRYRNIQVQPTEEARAAAYTIPSYEDQYYSPDFGQATGAAVPLDDYGYSDYR
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgatgaactccgtattggcctggccaccgcggaagacatc
aggcaatggtcttacggcgaggtcaagaagccggagacgatcaactaccgcactctgaag
cccgagaaggacggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggcaagtacaagcgtgtccgcttcaagggcatcatctgtgagcgctgtggcgtc
gaggtcactcgcgccaaggtgcgtcgtgagcggatgggccacatcgagctggccgctccc
gtcacgcacatctggtacttcaagggtgtgccgagccggctgggctacctgctcgacctg
gcgcccaaggatctcgagaagatcatctacttcgccgcctacgtgatcaccgcggtcgac
gacgagatgcgccacaacgagctctcgacgctcgaggccgaaatggtggtggagcgcaag
gccgttgaggaccagcgtgacgccgacctggaggcccgtgcgcaaaagctggaggccgac
ctggccgagctggaagccgagggcgcgaaagccgatgcgcggcgcaaggttcgcgacggt
ggcgagcgtgagatgcgccagctgcgcgaccgggcccagcgcgagctggaccggctcgag
gacatctggacgacgttcaccaagctggcccccaagcagctgatcgtcgacgagaacctc
tatcgcgagctcgtcgaccgctacggcgagtacttcaccggggcgatgggcgcggagtcg
atccagaagctgatcgagaacttcgacatcgacgccgaggccgacatcctgcgtgacgtc
atccgaaatggcaaggggcagaagaagcttcgcgccctgaagcgtctgaaggtcgtcgcg
gcattccagcagtcgggcaactcgccgatgggaatggtgctcgacgcggttccggtgatc
ccaccggagctgcgcccgatggttcagctcgacggtggccggttcgccacgtcggacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgtctcaagaggctgatcgacctc
ggtgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggagtcggtggacgcg
ctgttcgacaacggccgccgcggccgcccggtcaccgggccgggtaaccgtccgctcaag
tcgctgtcggatctgctcaagggtaagcagggccggttccgtcagaacctgctcggtaag
cgtgtcgactactcgggccgttcggtcatcgtggttggtccccagctcaagctgcaccag
tgcggtctgcccaagctgatggcgctcgagctgttcaagccgttcgtcatgaagcggctg
gtcgacctcaaccacgcgcagaacatcaagagtgccaagcgcatggtcgagcgccagcgt
ccccaggtgtgggacgtgctcgaagaggtcatcgccgagcacccggttctgctgaaccgg
gcgccaaccctgcaccgactcggcattcaggctttcgagccaatgctggtggagggcaag
gccattcagctgcacccgttggtctgtgaggcgttcaacgccgacttcgacggtgaccag
atggccgtgcacctgccgctgagcgccgaggcgcaggccgaggctcgcatcctgatgctg
tcgagcaacaacatcctgtcgcccgcgtccggccgcccgttggccatgccgcgactcgac
atggtgaccgggctgtactacctgaccaccgaggtggccggggccgaaggtgaataccgc
gcggccgccgatgaccagccggagcagggtgtgtactcgtcgccggccgaggcgatcatg
gcgtccgaccgtggtctgctctcggtgcgggcccagatcaaggtgcggttgacgcagctg
cgtccgccggctgagatcgaggtcgagctgttcggccagaacggttggcggccaggcgat
gcgtggctggccgagacgaccctgggccgggtgctgttcaacgagctgctgccgctgggc
tacccgttcgtgaacaagcagatgcacaagaaggtgcaggctgccatcatcaacgacctg
gccgagcgctacccgatgatcgtggtcgcacagaccgtcgacaagctcaaggacgccggt
ttctactgggcgacccgaagcggcgtcaccgtctcgatggccgacgtgttggttccgccg
cgtaaaaaggagatcctcgaccactacgaggaccgggccgacaaggtcgaaaagcagttc
cagcgcggtgctttgaaccacgacgagcgcaacgaagcgctggtcgagatctggaaggaa
gccaccgacgaggtcggtaaggcgctgcgtgagcactacccggccgacaacccgatcatc
acgatcgtcgattcgggtgccacgggtaacttcacccagacccgaacgctggccggcatg
aagggcctggtgactaaccccaagggtgagttcatcccgcgtccggtcaagtcgtccttc
cgcgagggcctgaccgtgctggagtacttcatcaacacgcacggcgctcgaaagggcttg
gccgacaccgcgttgcgtaccgccgactcggggtacctgactcgtcgtctggtggacgtg
agccaggacgtcatcgtccgcgagcacgactgcgagaccgagcgcggcatcatcgtcgag
ctggccgagcgtcagcccgacggcacgctgatccgtgacccgtacatcgaaacctcggcg
tacgcacggactttgggcgccgacgcggtcgacgaggccggaaacgtcgtcgtcgcgcgt
ggcgaggatctcggcgacccgtcgatcgaggccttgctggctgcgggcatcacgcagatc
aaggtgcgttcggtgctgacgtgcaccaccggtaccggtgtgtgtgcgacctgctacggg
cgctcgatggcgaccggcaagctcgtcgacatcggcgaggccgtcggtatcgtcgctgcg
cagtccatcggtgagcccggtacccagctgaccatgcgtaccttccaccagggtggtgtc
ggtgaggacatcaccggcggtctgccgcgtgtgcaggagctgttcgaggcgcgggtgccg
cggggtaaggcgccgattgccgacgtcaccgggcgggttcagctcgaggacggcgagcgc
ttctacaagatcaccatcgtccccgacgatggcggcgaggaagtcgtctacgacaagctc
tccaagcggcagcggctgcgtgtgttcaagcacgaagacggttccgagcgggtgctttcc
gacggcgaccacgtcgaggtgggccagcagctgatggaaggctcggccgacccgcacgag
gtgctgcgcgtgcaagggccccgcgaggtgcagatccacctggtccgcgaggtccaggag
gtctaccgggcacagggcgtgtcgatccacgacaagcacatcgaggtgatcgttcgccag
atgctgcgccgcgtcaccatcatcgattccggcgcgaccgagttcctgccgggttcgctg
atcgaccgtgcggagttcgaagcggagaaccgccgggtcgtcgccgagggcggcgagccc
gcggccggacgcccggtgctgatgggtatcacgaaggcgtcgctggccaccgactcgtgg
ctgagtgcggcgtcgttccaggagaccacgcgagtgctgaccgatgcggcgatcaactgc
cgcagcgacaagctcaatggtctgaaggagaacgtgatcatcggaaagctgatcccggcc
gggaccggaatcaaccggtaccgcaacatccaggttcagccgaccgaggaagcccgcgct
gcggcatacacgatcccgtcctacgaggatcagtactacagcccggacttcggccaggcc
actggtgccgcggttccgctggacgactacggctacagcgactaccgctag
DBGET
integrated database retrieval system
