Mycobacterium lentiflavum: MJO58_10010
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Entry
MJO58_10010 CDS
T08800
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mlw
Mycobacterium lentiflavum
Brite
KEGG Orthology (KO) [BR:
mlw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mlw03016
]
MJO58_10010
Enzymes [BR:
mlw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MJO58_10010
Transfer RNA biogenesis [BR:
mlw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MJO58_10010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
BDV_P10
Motif
Other DBs
NCBI-ProteinID:
ULP44237
LinkDB
All DBs
Position
complement(2091127..2092437)
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AA seq
436 aa
AA seq
DB search
MSEPEDPGPNGTAPDGSAPGSAESEPTPLLQPAEGIPDLAVTVSQIADAAQFLDSGHGPF
AVDAERASGFRYSNRAYLIQIRRAGAGTVLIDPVSHGADPLTALRPVAEVLSTDEWILHA
ADQDLPCLAEVGMHPPALYDTELAGRLAGFERVNLAAMTERLLGHGLVKGHGAADWSKRP
LPTEWLNYAALDVELLVELRAAIAAELAEQGKTDWAAQEFDYLRSVGSKEPTPRRERWRR
TSGIHKVRDRRGLAAVRELWTTRDNIAQRRDIAPRRILPDSAIIEAAIANPKTIEDLVAL
PVFGGRNQRRSAATWLGALEAARTSPDPPEDAEPTNGPPPPARWSRRKPEAAARLEAARA
GLSKLSEQVKVPTENLVSPDLVRRLCWDWADAPDPVEAVEEFLCAGHARAWQRELVDPVL
ATALQPPPKTEGSSAP
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagccggaggaccctgggcccaacggcaccgcgcccgacggcagcgcgcccggc
agcgccgaatccgaacccaccccgctgttgcagccggccgagggcatacccgacctggcg
gtgaccgtcagccagatcgcggacgccgcacagttcctggacagcgggcacgggccgttc
gcggtggacgccgagcgggcgtccggtttccgctactccaaccgggcctacctgatccag
atccgacgggccggcgccggcaccgtgctgatcgacccggtcagccacggcgccgatccg
ctgacggcgctgcggcccgtcgccgaggtgctcagcaccgacgaatggatcctgcacgcg
gccgatcaggatctgccgtgtctggccgaggtcggcatgcacccgccggcgctatacgac
accgagctcgccgggcgcctggccgggttcgagcgggtgaacctggcggcgatgaccgaa
cggctgctggggcatggtctggtcaagggtcacggtgcggccgactggtccaagcggccg
ctgcccaccgagtggctcaactatgcggcgctcgacgtggaactgctggtcgaacttcgt
gcggcgatcgccgcggagctggccgaacaaggcaaaaccgattgggctgcacaagaattc
gattacctgcgcagcgtcggcagcaaggagcccacgccccggcgcgagcgctggcggcgc
acgtcgggcatccacaaggtgcgcgaccgccgcggtttggcggcggtgcgtgaactgtgg
acgacccgcgacaacatcgcccagcgacgcgacatcgcgccgcggcgcatcctgccggat
tcggccatcatcgaggccgcgatcgccaatccgaagacgatcgaagacctggtcgcgttg
ccggtgttcggcgggcgcaaccagcggcgcagcgcagcgacctggttgggcgcgctggaa
gcggcccgcaccagtccggacccgcccgaagacgccgagccgacgaacggtccgccgccg
ccggcgcggtggagcaggcgcaagccggaagcggccgcccggctggaggcggcccgggcc
gggctgtcgaaactgtctgagcaggtgaaggttccgaccgagaacctggtttcacccgac
ctggtgcgacgactgtgctgggactgggccgacgcgccggacccggtcgaggccgtcgaa
gagttcttgtgcgccgggcacgcgcgggcctggcaacgcgagctcgtcgatccggtgctg
gcgaccgcgctgcaaccgccccccaaaaccgaaggcagctcagcgccgtag
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