Mycobacterium lentiflavum: MJO58_25480
Help
Entry
MJO58_25480 CDS
T08800
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mlw
Mycobacterium lentiflavum
Brite
KEGG Orthology (KO) [BR:
mlw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlw03032
]
MJO58_25480 (topA)
03400 DNA repair and recombination proteins [BR:
mlw03400
]
MJO58_25480 (topA)
Enzymes [BR:
mlw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MJO58_25480 (topA)
DNA replication proteins [BR:
mlw03032
]
Prokaryotic type
DNA Topoisomerases
MJO58_25480 (topA)
DNA repair and recombination proteins [BR:
mlw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MJO58_25480 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ULP42117
LinkDB
All DBs
Position
complement(5473822..5476635)
Genome browser
AA seq
937 aa
AA seq
DB search
MADPTIGRDSSGNGSRRRLVIVESPTKARKLAGYLGSTYIVESSRGHIRDLPRAAADVPA
KFKSEPWARLGVNVDADFEPLYIISPEKKSTVTELKGLLKDVDELYLATDGDREGEAIAW
HLMETLKPRIPVKRMVFHEITEPAILEAAQNPRDLDIDLVDAQETRRILDRLYGYEVSPV
LWKKVAPRLSAGRVQSVATRIIVQRERDRMAFRSAAYWDIVAQLDASVSDATAQPPTFTA
RLTSVDGLRVATGRDFDSLGQLRKADEVTVLNEARATELATGLTGAQLSVASVEEKPYTR
RPYAPFMTSTLQQEAGRKLRFSSERTMSIAQRLYENGYITYMRTDSTTLSQSAINAARTQ
ASQLYGDEYVSPSPRQYTRKVKNAQEAHEAIRPAGETFATPDAVRRELDGDEFRLYELIW
QRTVASQMADARGTTLSLRIAGTSRNQGAGPEGDHPVVFSASGRTITFAGFLKAYVETVD
ELAGGEADDAERRLPQLTEGQRLAALELTPDGHATSPPARYTEASLVKALEELGIGRPST
YSSIIKTIQDRGYVHKKGSALVPSWVAFAVTGLLEQHFGRLVDYDFTAAMEDELDAIASG
SEQRTNWLNNFYFGGDHGVQDSVARAGGLKKLVGVNLEGIDAREVNSIKLFDDSEGRPVY
VRVGKNGPYLERTVVGDDGETKPQRANLNDSLTPDELTLEVAEELFATPQEGRSLGVDPE
TGHEILAKDGRYGPYVTEVLPEPPPEDGDAAPAKKGKKPTGPKPRTGSLLRTMDLQTVTL
EDALKLLSLPRVVGVDPASGEEITAQNGRYGPYLKRGTDSRSLATEEQMFTITLDEALKI
YAEPKRRGRQAASAPPLRELGNDPVSGKPMVVKDGRFGPYVTDGETNASLRKGDDVLSIT
DERAAELLADRRARGPAKRPAKKSTRKAPAKKAAKRS
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
gtggctgacccgacaataggccgcgacagcagcggcaatggcagccggcggcgacttgtc
atcgtcgagtcgccgactaaagcgcgcaaactcgcgggctacctgggctccacctacatc
gtcgaatcgtcgcgaggacacatccgcgacctgccgcgggccgccgccgacgtgcccgcc
aaattcaagtcggaaccctgggccaggctcggggtcaacgtcgacgccgacttcgaaccg
ctctacatcatcagtccggaaaagaagagcacggtcaccgagctcaagggccttttgaaa
gacgtcgacgagctctacctggccacggatggtgaccgcgagggtgaggccatcgcgtgg
cacctgatggaaacgctgaagccgcgcatcccggtcaagcggatggtgttccacgagatc
accgagccggccatcctcgaggccgcgcaaaaccctcgcgacctcgacatcgacctggtc
gacgcgcaggagacccgtcgcatcctggaccggttgtacggctacgaagtcagtccggtg
ctgtggaagaaggtcgcgccccggctgtcggccggccgggtgcagtccgtggccacccgc
atcatcgtgcagcgcgaacgcgaccggatggcgtttcgcagcgcggcgtactgggacatc
gttgcccagctggacgccagcgtctccgacgccaccgcgcagccgcccacctttaccgcc
cggctgacctctgtcgacggactgcgggtggccaccggacgcgacttcgactcgctgggc
caactgcgcaaggccgacgaggtgaccgtcctcaacgaggcgcgggcgaccgagctggcc
accggtttgacaggggcgcagctgtcggtggcctcggtcgaggagaagccctacacccgc
cggccgtacgcgccgttcatgacgtcgacgttgcagcaggaggccggccgcaagctgcgg
ttctcgtcggagcggacgatgagcatcgcgcagcggctctacgaaaacggctacatcacc
tatatgcgtaccgactcgacgacgctgtcgcagtcggcgatcaacgcggcgcgcacccag
gccagtcagctctacggcgacgagtacgtgtccccgtcgccgcggcagtacacccgcaag
gtcaagaacgcccaggaagcccacgaggcgattcgcccggcgggcgagacgttcgccacc
ccggatgcggtgcgccgtgagctcgacggcgacgagttccgtctctacgagctgatctgg
cagcgcacggtggcctcgcagatggccgacgcacgcgggaccacgctgagtttgcgcatc
gccggcacctcgcgaaaccagggggccggcccggaaggcgatcatccggtggtgttttcg
gccagcggtcgaaccatcaccttcgccggcttcctgaaggcctacgtggaaaccgtggac
gagctggccggcggcgaggccgacgacgccgagcgccggctgccccagctcaccgaaggc
cagcggctggcggcgctcgagctgactcccgacggccacgccaccagcccgccggcgcgc
tacaccgaggcctcgctggtcaaggcgctcgaggagctgggtattggccgaccgtcgacg
tattcgtcgatcatcaagaccatccaggatcgcggttacgtgcacaagaagggcagcgcg
ctggtgccctcgtgggttgcgttcgccgtcaccggtttgctggaacagcatttcggccgt
ctcgtcgactacgacttcaccgccgcgatggaagacgagctcgacgcgatcgcgtcgggc
agcgagcaacgcaccaactggctcaacaacttctacttcggcggtgaccacggcgtgcag
gattcggtggcgcgcgccggcgggctcaagaagctcgtcggtgtcaacctcgaaggaatc
gacgctcgagaagtcaactccatcaagctgtttgatgattcggaagggcgcccggtctac
gtccgggtcggcaagaacgggccgtacctggagcgcacggtcgtcggcgacgacggtgag
acgaagccgcagcgtgccaacctcaacgactcgctgactcccgacgagctgacgctggag
gtggccgaagagcttttcgccacgccgcaggagggtcgctcgctgggtgtggacccggag
accggtcacgaaatcctggccaaggacggccgttacgggccgtatgtcaccgaggtcctg
cccgaaccgccgccggaggacggtgacgcggccccggcgaagaagggcaagaagcccacc
ggccccaaaccacgcaccggctcgctgctgcgcaccatggatctgcagacggtcacgctc
gaggacgcgctgaaactgctgtcgttgccccgggtggtcggtgtcgaccctgcgtcgggc
gaggagatcaccgcgcagaacgggcgctatggcccgtacctgaagcgcggcacagattct
cgttcgctggcgaccgaagagcagatgttcacgatcaccctggacgaggcgctcaagatc
tacgccgagccgaaacgccgtggtcggcaagctgcttcggctccgccgctgcgcgagctg
ggcaacgacccggtgtcgggtaagccaatggtggtgaaggacggtcgatttggaccgtac
gtcaccgacggtgagaccaacgccagcctgcgcaagggcgacgacgtgttgtcgatcacc
gacgagcgcgctgccgagttgctggccgaccggcgggcccggggtccggcgaaacggccc
gcgaagaaaagcacgcgcaaggccccggcgaaaaaggccgccaagcgcagttag
DBGET
integrated database retrieval system
