Mirounga leonina (Southern elephant seal): 117998150
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Entry
117998150 CDS
T07472
Symbol
SIX5
Name
(RefSeq) homeobox protein SIX5
KO
K19474
homeobox protein SIX5
Organism
mlx
Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mlx03000
]
117998150 (SIX5)
Transcription factors [BR:
mlx03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
117998150 (SIX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117998150
NCBI-ProteinID:
XP_034842676
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MATLPAEPSAGPAAGGEAVAAAAATEEEEEEARQLLQTLQAAEGEAAAAAGAGAGEAASG
AEGPGSPGVPGSPPEAAAEPPTGLRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERL
RGSDPVLRARALVAFQRGEYAELYRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRAL
GAVDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGL
SLTQVSNWFKNRRQRDRTGGGGGAPCKSESDGNPATEDECSRSPEDLDRAVAPVAAEAPA
QGSIFLAGAAPPAPCAASSSILVNGSFLAAGSSPAVLLNGSPVIINSLALGEASGLGPLL
LTGGSGPPAPQPGPQGASEGKTSLVLDPQTGEVRLEEAQPEAADTKEAQVAASGPAGEEA
AGPLPQVVPGPPPAAPFPLPPGPVPSVAAPQVVPLSPPPGYPAGLGPASPLLNLPQVVPT
SQVVTLPQAVGPLQLLAAGPGSPVKVAAAGPANVHLINSGVGVTALQLPSATAPGNFLLA
NPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLALPLKPDPAISVPEGALPV
APSPALPDVHALGPLSAPPPPPVPVPAAAAAASLPFSPDSSGLLPGFPAPPPEGLLLSPA
AMPVWPAGLELSAGPEGLLEAEKGLGTQAPHAVLRLPDPDPEGLLLGSTAGGEVDEGLEA
EPKVLTQLQSVPVEEPLEL
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggctaccttgcctgcggagccgagcgcggggccggcggctgggggggaggcggtggcg
gcggcggcggcgaccgaagaagaggaggaggaagcgcgccagctcctgcagactttgcag
gcggccgagggtgaggcagcggccgcggccggggccggggcgggcgaagcggcgtcggga
gcggagggcccgggatccccgggcgtccccgggtcgccccccgaggccgctgccgagccg
cccacgggcctccgcttctcgcccgagcaggtggcgtgcgtttgcgaggcgctgctacaa
gccggccacgccggccgcttgagccgcttcctgggcgcgctgcccccggccgagcgccta
cgtggcagcgatccggtgctgcgcgctcgggccctggtggccttccagcggggcgagtac
gccgagctctaccggctgctcgagagccgccccttccccgccgcccaccacgcctttctg
caggacctctacctgcgcgcgcgctaccacgaggccgagcgggcccgcggccgcgcgctg
ggcgcagtggacaagtaccgtctgcgcaagaagttcccgctgcccaagaccatatgggac
ggcgaggagaccgtctactgcttcaaggagcgctcccgcgccgcgctcaaggcctgctat
cgcggcaaccgctacccaacgccggacgagaagcgccgcctggccacgctcaccggcctc
tcgctcacgcaggtcagcaactggttcaagaaccggcgacagcgcgatcggaccgggggc
ggcggcggcgcgccttgcaagagcgagtctgacgggaaccccgccaccgaggacgagtgc
agccgcagtcccgaggacctggacagggcggtggccccggtggcggcggaggcccccgcc
cagggctctatattcctggccggggccgcccctcctgccccctgcgccgcctcctcctcc
atcctggtgaacggcagcttcctggctgcgggcagctctcccgccgtgctcctcaacggg
agccccgtcatcatcaacagcctggccctcggggaggcctccggcctgggccccctgctg
ctcacgggtggcagcggccctcctgcaccgcagcccgggccccagggggccagcgagggc
aagacctccctggtcctggaccctcagaccggggaggttcggctagaagaggctcagccc
gaggccgccgacaccaaggaggcccaggtggctgcttcggggccggcgggagaggaggct
gcggggcccctgccccaggtggtgcccggccccccgccggctgcccccttccctctgccc
ccggggccagtgccgtccgtggctgctccccaggtggtgccgctttccccgccccctggg
taccctgcaggcctgggccccgcgtccccactgttgaacctgccgcaggtggtgcccacc
tcacaggtggtgaccctgccccaggcggtggggccgctgcagctgttggcggccgggccg
ggcagccccgtgaaggtggcggccgcgggccccgccaacgtgcacctgataaactccggg
gtgggcgtgactgccctgcagctgccttcggccaccgccccaggaaactttctcctggcc
aaccccgtgtcgggcagccccatcgtgacaggcgtggccgtgcagcagggcaagatcatc
ctcacggccaccttccccaccagcatgctggtctcccaggtcctgccgcctgcccccggc
ctggccctgcccctgaagccagacccggccatctccgtgcccgaaggagccctcccggtg
gcccccagccccgctctcccggacgtgcacgccctgggcccgctgtctgcgccgccgccg
ccgcccgtccccgtccccgccgccgccgccgccgccagcctgcccttctcgccggattcc
tcgggtctcctacccggcttcccggcgcccccgcccgaagggctcctgctgtcgcctgca
gccatgcccgtctggcccgcgggcctggaactgagcgcgggcccggaggggctgctggaa
gcagaaaaggggttggggacgcaggccccccacgccgtgctgaggctgccggaccccgac
cccgaggggctgctcctggggtccacggccggcggcgaggttgacgaggggctggaagcc
gagcccaaggttctgacccagctacagtcggtgcctgtggaagagcccctggaactgtga
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