Mirounga leonina (Southern elephant seal): 117998187
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Entry
117998187 CDS
T07472
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain-containing protein 1 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
mlx
Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mlx03000
]
117998187 (NPAS1)
Transcription factors [BR:
mlx03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117998187 (NPAS1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
117998187
NCBI-ProteinID:
XP_034842732
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MAAPYPSSGGGGEVKCGGGRGRSVPWDFLPGLVVKAPPGPCLQAQRKEKSRNAARSRRGK
ENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAAGPPAGLA
PGHRGPVALVSEVFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGS
SVFDYIHPGDHSEVLEQLGLRAPTPGPPTPPSVPSSSSSSSSSSLADTPEIEASAAEVPP
FSRVQERSFFIRMKSTLTKRGLHVKASGYKVIHVTGRLRARSLGLVALGHTLPPAPLAEL
PLHGHTIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDAARIRQSHLDLL
DKGQVMTGYYRWLQRAGGFVWLQSVATVAVSGKSPGERHVLWVSYVLSQAEGGQTPLDAF
QLPASVACEDASSPEPEPTEPEPPVDGKQAAPLDKDEAPRSRGKRIKVEPRPGEAKDPED
SGDEEPSGHPALPRPEFTSVIRAGALKQDLVRPWGLGPPGDPPPSLLHAGFLPPVVRGLC
TPSTIRYGPAELGLMYPHLQRLGPGPTLPEAFYPTLGLSYPGPTGTRMQRKGD
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccctaccccagcagtggcggcggaggcgaggtcaagtgcgggggaggtcgt
ggccgcagcgtcccgtgggactttctgcctgggctggtggtcaaggccccgcccggaccc
tgcctgcaggcgcagcgcaaggagaagtcccggaatgcggcgcgctcgcggcgcggaaag
gagaacctggagttcttcgagctggccaagctgctcccgctgcccggagccatctcgagc
cagctggacaaggcgtccatcgtgcgcctcagcgtcacctacctccgcctgcgccgcttc
gccgccctcggggcgccgccctggggactgcgggccgcggggccaccggccggcctcgcc
ccaggccacaggggccccgtggcgctggtgtctgaggtcttcgagcagcacctgggagga
cacatcttgcagtccctggatggcttcgtgtttgccttgaaccaggaagggaagttcctc
tacatctccgagaccgtctccatctatctgggtctgtcacaggtggagctgacgggtagc
agcgtcttcgactacatccaccccggggaccactccgaggtgctggagcaactggggctc
cgggccccgacccccgggccccccaccccgccctccgttccctcctcttcctcctcctcg
tcttcctcctcgctcgcggatacccctgagatcgaggccagcgccgccgaggtgcctccc
ttctcccgggtccaggagcgctccttcttcatccgcatgaaatcgaccctcaccaagagg
gggctgcacgtcaaggcctcggggtacaaggtcatccacgtaacggggcgccttcgggcc
cgctccctgggccttgtggctctgggccacacgctgcccccggcccccctggctgagctg
ccgctacacggacacacgatcgtcttccgtctcagcctgggtctcaccatccttgcttgt
gagagcagagtcagcgaccacatggacctggggccctcagagctcgtgggtcgcagctgc
taccagtttgtccacggacaggacgcagccaggatccgccagagccacctggacctgctg
gacaaggggcaggtgatgactggttactaccgctggctgcagcgggctgggggctttgtg
tggctgcagtccgtggccaccgtggccgtgagcgggaagagccccggggagcgccacgtg
ctctgggtcagctacgtgctcagccaagccgagggtggccagacccctctggatgccttc
cagcttccggccagcgtggcctgtgaggacgcatccagccccgagccagagcccacagag
ccagagcctccagtggacgggaagcaggctgcccccctagacaaggacgaggccccccgg
agccggggcaaacgcatcaaagtggagcctcgcccaggggaggctaaagacccagaggac
agtggggacgaggagccgtctggccacccggccctgcctcggcctgagtttacttctgtc
atccgggcaggggccctgaagcaggacctggtgcggccctggggcctggggcctcctggg
gaccccccaccttccctcctccatgcgggcttcctgccccccgtagtgcggggcctgtgc
acacccagcaccatccgctacggccccgcggagctgggcctcatgtacccgcacctgcag
aggctgggcccgggccccaccctccccgaggccttctaccccaccctgggcctgtcgtac
ccggggcccacgggcaccaggatgcagcggaagggggactga
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