Mirounga leonina (Southern elephant seal): 117998199
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Entry
117998199 CDS
T07472
Symbol
DHX34
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlx03019
]
117998199 (DHX34)
Enzymes [BR:
mlx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117998199 (DHX34)
Messenger RNA biogenesis [BR:
mlx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
117998199 (DHX34)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_DHX34
Helicase_C
HA2_C
OB_NTP_bind
DEAD
HA2_N
AAA_22
ResIII
nSTAND3
AAA_19
AAA_16
TsaE
ATPase_2
Motif
Other DBs
NCBI-GeneID:
117998199
NCBI-ProteinID:
XP_034842753
LinkDB
All DBs
Position
Unknown
AA seq
1139 aa
AA seq
DB search
MPPPRTKEGGDPRGRHWDPGEEEAPEKWDWNCPETRRLFEDAFFRDEDYIRQGSEECQKF
WAFFERLQRFQSLKATSKREKDPVCRKHSVPALADLPRTYDPRYRINLSVLGPDTRGSRG
LGRQPPERVAEFRRALLHYLDFGQKQAFGRLAKLQQGRAGLPIAQYGNRILQTLKAHQVV
VVAGDTGCGKSTQVPQYLLAAGFSHVACTQPRRIACISLAKRVSFESLSQYGSQVGYQIR
FESTRTAATKIVFLTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPK
RPDLKVILMSATINISLFSSYFGGAPVVQVPGRLFPITVVYQPQETEPAASKSGRLDPRP
FLRVLEAIDSKYPPEERGDVLVFLSGMAEISSVLEAAQTYAGRTQRWVVLPLHSTLSVAD
QDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLQRLQEFWIS
QASAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMNVGDPR
TFPFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHL
AEPVLTIAAALSVQSPFTRSAQSHPECAVARRPLESDQGDPFTLFNVFNAWLQVKSERSR
NSRKWCRQRGIEEHRLYEMANLRRQFKELLEDHGLLARAQAATPGDSYRRLQERRERRAL
YHLKRQHEEGGGRRRKVLRLQGDLDGGSSDEDRGPGDSVDIQDVKFQLRHSLDQLQAATS
SAQDLTRDQMALLKLVLGRGLYPQLAVPDPFNSSRKDSDQMFHTQSQQGTVLHPTCIFAS
SPEALHPQERKAGAGQASRDDKDKMSSKHQLLAFVSLLETNKPYLVNCVRVPALQSLLLF
SRSLDTNGDCSRLVADGWLELQLAESESAVRLLAASVRLRAHWESALDRQLAREAQRRWP
EVDQEEAAAPVDHKEVADLSRDLLHFAASKVPYSLRRLTGLEVQNLYVGPQTITTAPSLP
GLFGSSPLSPHPTKGGYAVTDFLTYNCLASDTDLYSDCLRTFWTCPHCGLHMPLTPLERM
AHENTCPEAPQDSPPGAEKATPEPLPKVSALQRPYHCEVCGEDFLFTPTDVLRHRGRHL
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcccagaacgaaggagggcggggatccccgaggccgacactgggatcccggt
gaggaggaggcccccgagaaatgggactggaattgtccagagacacgtcgcctcttcgag
gatgcctttttccgcgatgaggattatatacgccagggttctgaggagtgccagaagttc
tgggccttctttgaacgcttgcagagattccagagtctcaaggccaccagcaagcgggag
aaagaccccgtgtgtcgcaagcacagcgtcccagccctggctgacctgcctcgcacttac
gacccacgctaccgcatcaacctctcggtcctgggccccgacacccgcggctcccggggg
ctgggcaggcagcccccggagagagttgccgagttccgccgagccctgctgcactacctg
gacttcggccagaagcaggcgttcgggcggctggccaaactgcagcaggggcgggcgggg
cttcccatcgcccagtacgggaaccgcatcctgcagacgctgaaggcgcaccaggtggtg
gtggtggccggggacacgggctgtggcaagtccactcaggtgccccagtacctgctggcc
gccggcttcagtcacgtggcatgcacccagccccggcggatcgcctgcatctccctggcc
aagcgtgtcagcttcgagagcctcagtcagtatggctcccaggttggctaccagatccgc
tttgagagcacgcggacggcagccaccaagatcgtgttcctgacggtggggctgctcctg
aggcagatccagcgggagcccagcctgccccagtaccaggtcctgatagtggacgaagtc
cacgaacggcacctccacaacgacttcctcctgggcgtcctccggcgcctgctgcccaag
cggccggacctcaaggtcatcctcatgtcggccaccatcaacatctcgctcttctccagc
tacttcggtggtgctcccgtggtgcaggtgcctgggaggctgttccccatcacggtcgtg
taccagccacaggagacggagccagcagcgtccaagtccgggaggctggaccctcggcct
ttcctcagggtactggaagccatcgacagcaagtacccccccgaggagcggggcgacgtc
ctcgtcttcctcagtggcatggcagagatcagctcggtcctcgaggctgcccagacctac
gccggccgcacccagcgctgggtggtgctgcccctgcatagcaccctctccgtggccgac
caggacaaggtatttgacgtggccccccctggagttcggaaatgcatcctctccaccaac
atcgccgagacttctgtcaccattgatgggatccgctttgtagtcgattctgggaaggtg
aaggagatgggctacgacccacaggccaagctgcagcggctgcaggagttctggatcagt
caggccagcgccgagcagcggaagggccgggccggccgcacgggccccggggtctgcttc
cgcctctatgctgagtccgactacgacgccttcgccccctaccccgtcccggagattcgg
agggtggcgctcgacgcgctggtgctgcagatgaagagcatgaacgtgggggacccacga
accttccctttcatcgagcccccaccaccagccagcctggaaacagccatcctctacctc
cgggaccagggggccctggacagctctgaggccctcacccccatcgggtccctactggcc
cagctgccggtggatgttgtgattgggaagatgctgatcctgggctccatgttccacctg
gcggagcccgtgctcaccatcgcggctgccctcagcgtccagtcgcccttcacccgcagt
gcccagagccacccggagtgtgcggtggcacggcggcccctggagagtgaccagggggac
cccttcacgctcttcaatgtcttcaacgcctggctgcaggtgaaatccgaacggagcaga
aactcacgcaagtggtgccgccagcggggcatagaggagcaccggctgtacgagatggcc
aacctgcggcgccagttcaaggagctgttggaggaccacgggctgctggcccgggcgcag
gccgcgacaccaggcgacagctaccgtcggctgcaggagcgccgtgagcgcagggccctg
taccacctgaagcggcagcacgaggagggcggggggcgccggcgcaaggtgctgcggctg
cagggggacctggacggcggctccagcgacgaggaccgggggcccggcgacagcgtggac
atccaggacgtgaagtttcagctgcgtcacagcctggatcagctgcaggcggccaccagc
tcagcccaggacctgacgcgggaccagatggccctgctcaagctggtgctgggccggggc
ctctacccgcagctcgccgtcccggatccgttcaacagcagtcgcaaggactcggaccag
atgttccacacgcagtcccagcagggcaccgtgctgcaccccacatgcatctttgccagc
agccccgaggctctgcacccgcaggagcggaaggccggggccggccaggccagccgagat
gacaaggacaagatgagcagcaagcaccagctcctcgccttcgtctccctgctggagacc
aacaaaccctacctggtgaactgcgtccgcgtccccgctttgcagtccctcctgctcttc
agccggtccctggacaccaatggggactgctcgcgcctggtggccgacggctggctggag
ctccagcttgcggagagtgagagcgctgtccgccttctggcagcttccgtgcggctccgg
gcccactgggaaagcgccctggaccggcagctggcccgtgaggcccagcggcggtggcca
gaggtggatcaagaggaggcggcggctccggtggaccacaaggaggtggcagacctgagc
agggacctgctgcattttgcggcgtccaaggttccctacagcctccggcggctcacaggg
cttgaagtccagaacctatatgtgggaccccagaccatcaccactgcccccagtctcccc
ggcctctttggcagttctcccctctccccccaccccactaaagggggctatgcagtcact
gacttcctcacctacaactgcctcgcgagcgacacggacctgtacagcgactgtctccgc
accttctggacctgcccccactgtggcctgcacatgcccctgacgcccttggagcgcatg
gcccatgagaacacgtgccctgaggccccgcaggacagccccccaggggctgagaaagcc
acccccgagcccctcccgaaggtgtctgccctgcagcggccctaccactgcgaggtctgc
ggggaggacttcctgttcacgcccacggacgtgctgcggcaccgggggcggcacctgtga
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