Mirounga leonina (Southern elephant seal): 117999053
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Entry
117999053 CDS
T07472
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117999053 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
mlx04091
]
117999053 (FREM1)
Lectins [BR:
mlx04091
]
C-Type lectins
Lecticans
117999053 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Big_9
Lectin_C
Calx-beta
Cadherin_5
IGF2_C
Motif
Other DBs
NCBI-GeneID:
117999053
NCBI-ProteinID:
XP_034843856
LinkDB
All DBs
Position
Unknown
AA seq
2165 aa
AA seq
DB search
MSAPTWGGPGALPLLLLLGWAGATFISLNRGLRLLKGSSAFLSGDDLKFAIPKEKDACKV
EVVMNEPMTQRVGKLTPQVFDCHFLPNEVKYIHNGCPILDEDAVKLRLYRFTETDTFTET
FILRVYLLEPDCNIIRRSNNVLEVSEFYGLSRAIDKNLLRFDYERTAGLECTVRLDPVGS
RLPAHGQMVLLEPRPEKPRGDQPHSFFPESQLGTELRCPGGSCALGLKKMGSVNVSCEEF
LLMGLRYQHTDPPSPNIDYISIQLDLTDGRSKIVYKSESAWLPVYIRAGFPNQIPRAAFM
AMFILEVDQFILTSLTTSVLDCEEDETPKPLLVFNVTKAPPQGYVTHLWDHTRPISSFTW
KDLSDMQIAYQPPNSSYSARRHYEVEVEVYDFFFERSAPITIHISIRTADTNAPRVSWNT
GLSLLEGQSRAITWEQFQIVDNDDIHAVQLVTVGGLQHGRLTLRGGKGFLFTVADLQAGV
VRYHHDDSDSTKDFVIFRIFDGHHSIRHKFPINILPKDDSPPFLISNIVIELEEGQTILI
QGSMLRASDMDSSDDYIFFNITKPPQAGEIMKKPGPGLIGYPVPGFLQRDLFNGIIYYRH
FGGEIFEDFFEFVLWDSHEPPNLSVPQVVTIHITPVDDQLPKEAPGVSRHLVVKETEVAY
ITKKHLHYIDTEYDRELLYTITTPPFFSFGHRHLDAGKLFMVDSIPKLTKNPAAPGLRSF
TQHAVNHMKVAYMPPMRDIGLHPGHVQFAFSISNQHGGTLHGICFNITILPVDNQVPEVF
TNALRVTEGGQCVISTENILVSDVDTELDNICLSLQRLPQCGRVELDGFPLNTGGTFSWG
DLRALKVRYQHDGSERLQDDIFLEVTDGTNSAEFVLHVEVFPVNDEPPILKADLIPMMHC
SEGEEVVITSEYILATDVDSDDLKLMFVIAREPQHGVVRKAGVTVDQFSQGDVISGAVTY
KHTGGEIGLVPCFDTITLVVSDGEAGPSVNGCCYNGPHPSVPLHESFPVYDLNITVHPVD
NQSPSIAIGTMFVVDEGFSAAITINHLSATDPDTAADDLEFVLASPPQFGYLENTLPSAG
FEKSNMGVSIGSFQWKDMKALHINYVQARHLRMEPTADQFMVYVTDGKRRSLEIPFYIII
NPTNDEVPDFVVQNITVCEGQMKELDSSIIKAADLDVPKDPLLFSITHKPRHGLLINGVL
SKDFPQNKQPVNPGQKHELVQNFSLELLKNGLKLMYVHDDSESLADDFTVQLSDGKHKIL
RTISVEITPVNDEKPMLSKKAEMTVKMGETRIISSAVLSAIDEDSPRERIYYFFERLPQN
GQLQLKIGRNWIPLYPGMKCTQEEVDLNLLRYTHTGAMDSQDQDIFTFYLWDGDNRSPAF
DCHITIKDMGKGDTVILVKPLVVSKGDRGFLTTSTLLAVDGTDKPEELLYVITSPPRYGQ
VEYVRSPGVPITSFSQMDIAGHTVCYVHKSKAAVSRDTFRFLVSNGLQTKHGLFEITLET
VDRALPVVTRNRGLRLAEGATGLLSPDLLQLTDPDTPAEKLTFVLAQLPQHGQLHLRGTE
LLRHNFTQRDVDSRDVAYRHLGGDSRVDCFTFVATDGTNQGFVVAGRVGQEPVSFTIQVD
QLDKTAPYITHLNSPSQVGLLKNGCYGIYLTSHVLKASDPDTDDDLIIFKILRGPQHGHL
ENTTGEFIHEKFIQKDLNSKTILYIINPSLEVNSDIMEFQIMDPTGNSATPQILELKWSH
IEWSQTEYEVCENVGMLPLEITRRGYSMDSAFVSVKVNQVSATVGKDFILTPSKLIQFDP
GMSTKMWNIAITYDGLEEDDEAFEVILNSPVNAVLGTKTKAAVKILDSKGGQCHPSYSFN
PNKHNARKKGIWHLLSPGSSSPTTSGSFHLERRPLTSNKWPAVTRGDTRQGFESPDLSRM
KLRTRGNGKTVLPSSVYRNGTDIIYNYHGTVSLTLEEDGSPSHQRKAKVSIIRQLPKTSR
EAELPQADKDPLPSFPKNCTLELKGLFHFQESLRKLYKCDGVTWKAWSSQSEEVERKSCP
AGWHHHSGYCHSLITEQKASWNTAARACKEHHLGSLVTVLSRRHMRWLWDISGGKPFWIG
LNDRVRAGRWEWIGGEPVTFTTWRKGPPQRLKRGKNCVLARRQGKWQTQDCGKGKAHNYM
CSRKL
NT seq
6498 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctccgacctggggtgggcccggggctttgcccctgctgttgctcctaggctgg
gccggtgcgaccttcatcagccttaatcgtgggctcaggctgctgaagggcagctctgcc
ttcctgtcgggagatgacctgaagtttgccatccccaaagaaaaagatgcttgcaaagtg
gaagttgtgatgaacgagccaatgactcaaagggttgggaaactcaccccacaggtcttt
gactgccatttccttcccaatgaagtaaagtatattcacaatggttgcccaattcttgat
gaagatgcggtgaagcttagactgtacagatttactgagacagataccttcacggaaacc
tttatcctgcgggtctatctcctggaacccgactgtaacatcatccgtaggagtaacaat
gtcctggaggtgtctgaattctatggcttgtccagagccattgataagaacctgctcaga
tttgattacgagaggacagccggcctggagtgtacggtcaggctggatcctgtgggaagc
cggctgccagcccatggtcagatggtcctgctggagcctcggccagaaaaacctcgtggc
gatcagccacacagttttttccctgagtctcaactgggaacagagctgaggtgtccaggt
ggaagctgtgccctgggactgaagaaaatgggaagtgtcaacgtgagctgtgaggagttc
ttgctgatgggtcttcgttatcaacacacggatcccccttctcccaacattgactacatc
tctatccagctggacctcacagatggcaggagcaaaattgtatacaagtcagagagtgcg
tggttgcccgtctatatcagagctggctttcctaatcagattccaagggccgcgttcatg
gccatgtttattctggaagtggatcagtttatcctgacctccttgactacatccgtcctg
gactgtgaagaggatgagacccctaagcccttgctggtgttcaacgttacgaaagcccca
ccccagggctatgtgactcatctgtgggatcacaccagacccatctcctcgttcacctgg
aaagatctgagtgacatgcagatagcctaccagccaccgaacagcagctattctgcacgg
agacattacgaggtggaggtggaggtttatgatttcttcttcgaaaggagtgcacctatc
accatccacatctccatcagaacagcggatacaaatgccccccgagtgtcctggaacaca
ggtctgagtcttctagaggggcagtctcgggccatcacttgggaacagtttcagattgtc
gacaatgatgacatccatgctgtccagctggtcaccgtgggcggcctgcagcatggacgg
cttacactaagaggcgggaaaggatttctcttcactgtggctgaccttcaggctggagtt
gttcgctatcatcatgacgacagtgactccaccaaagacttcgtgatcttcaggatattt
gatggccatcacagcatccgccataagtttcccatcaacatcttgcccaaagatgacagt
cccccattcctcataagcaacattgtgattgaactggaggaggggcagaccatactgatc
cagggttccatgctgagagcatcagacatggactccagtgatgactacatcttctttaat
atcacaaaacctcctcaggctggagagatcatgaagaagccagggccagggctgataggc
tatcctgtccctggcttccttcagagggatctatttaatggcatcatttattatcgtcac
tttggtggagagatctttgaagacttttttgaatttgtcctgtgggatagccatgaacct
ccaaatctctcagtgccacaggtggtgaccatccatatcactccagtggatgaccagctt
ccaaaagaggctcctggagtttctcggcatttggttgtcaaggaaactgaggtggcctac
ataactaagaaacatctacattatatagatacagaatatgacagggagcttctctacacg
ataacgacacctccatttttctctttcggccacagacatctggatgctgggaaattgttt
atggtcgatagcattccaaagctgaccaaaaatcctgcagccccggggctgagatcattc
actcagcatgctgtgaaccacatgaaagtggcctacatgccacccatgagagatataggc
ctccatccaggacatgtccagtttgccttttccatcagtaaccaacatggtggcactttg
catgggatctgctttaacattacaattcttccagtggacaatcaagttcctgaggtgttt
accaatgccctgagagtgactgagggaggtcaatgtgtcatcagcacagagaacattctg
gtttctgatgtggataccgaactggacaacatctgcctctccctgcaaagattgcctcag
tgtggaagggtggagctggatggatttcctctaaacacaggaggcacattttcttgggga
gacctccgtgccttaaaagttaggtatcagcatgatggatctgagagacttcaggatgac
atattcttggaggtcacagatggcacgaattcagcagaatttgttctacatgttgaggtg
ttccctgtaaatgatgagccaccaatcctaaaggctgacctcatccccatgatgcattgc
tcagagggcgaagaggtggtcatcacctctgaatacattttggctactgatgtggacagt
gatgacttgaagctgatgtttgtgatcgctcgagagcctcagcatggcgtggtgaggaaa
gctggagtcacagtggatcagttctctcagggagatgtcatctcaggggctgtgacatac
aaacacacaggtggtgagattggcctggtgccttgttttgataccattacattggtggtt
tcggatggagaagctggcccttccgtgaatggctgttgctacaacgggcctcatccatct
gttcctcttcatgagtcctttccagtgtatgacctcaatatcacggtacatccagtggac
aaccaatcaccttcaattgcaataggtaccatgttcgtggtagatgagggtttctctgca
gccattaccattaaccatttgtccgccactgatcctgacactgcagcagacgacttggag
tttgttttggcttcccctccccagtttggctaccttgaaaacacgcttccttctgcaggt
tttgaaaaaagcaatatgggcgtaagcataggttcgttccagtggaaagacatgaaagca
ttgcatattaactatgtgcaggccaggcatctgaggatggaaccaacagctgaccagttc
atggtgtatgtcacagatgggaagcgacgctccttggagataccattttacattatcatc
aaccccacaaatgatgaagttcctgactttgtagtgcagaatattactgtgtgtgagggt
cagatgaaagaactggattcctccatcatcaaagctgctgatctagatgttcccaaggac
cctttgctgttcagcatcactcataaaccacgccatggcctcctcatcaatggggtgctt
agcaaagactttcctcaaaataagcagcctgtcaaccctggccagaagcatgaacttgtt
cagaacttttccttggaacttctcaagaatggactgaagttgatgtatgtgcatgatgac
tcagagagccttgctgatgactttacagtccagttgtcagatgggaaacataagatatta
agaacaatttcagtggagatcaccccagttaatgatgagaaaccaatgctgagcaagaag
gctgaaatgacagtgaaaatgggcgaaactcgtattatttctagtgccgttctttcagcc
atagatgaagactcacccagggagaggatttactatttttttgaaaggcttccccaaaat
gggcagcttcaactcaagatagggaggaactggatccctctctaccctggcatgaaatgc
actcaggaggaagtggatctgaacttgctcagatacacacataccggggcgatggattcc
caggaccaagacatcttcaccttctacctctgggatggtgacaacagatcaccagcattt
gactgtcacatcaccatcaaggatatgggaaaaggtgatactgtcatccttgtgaaaccg
ctggtggtgtctaaaggtgaccgaggtttcttgacgaccagcactctccttgctgtggat
ggaacagacaaacccgaggaactactctatgtcatcacctcccctccgcgctatggccag
gttgagtatgtccgctctcctggagtccccattacaagcttcagccaaatggacatagca
ggacacacagtctgctatgtacataagagcaaggcagctgtctcccgtgacaccttcaga
ttcctcgtcagcaatggcctgcagaccaaacacgggctgtttgagatcacactggagact
gtggacagagccttacctgtggtgaccaggaacagggggctgagactggccgaaggcgcc
acgggcctgctttcccctgacctcctccagctgaccgaccctgacaccccagcggagaag
ctcacctttgtgttggcccagctcccacagcacggccagcttcacctgcgggggacagag
ctgcttcgacacaacttcactcagcgggatgtggacagcagggatgtggcctacaggcac
ctgggaggggactcccgggttgactgctttacctttgtggccacagatgggacaaaccaa
ggctttgtcgtggctgggagagtgggccaagagcctgtgtcgttcaccatccaggttgac
cagttggacaaaacagccccctacatcacacacttgaattccccttctcaagtggggctc
ctgaaaaatggctgttacgggatttacctcacttcccacgtgttgaaggcatcagaccct
gacaccgatgatgatctgatcatctttaagattttacgaggcccccaacatggacatctg
gagaacacaacaggtgaatttatccatgagaaatttatccaaaaggacttaaacagtaag
accattctttacatcattaacccatctttggaagtgaattcagatatcatggaatttcaa
atcatggaccccacagggaactctgcgactcctcaaattttggaattgaagtggtctcat
attgaatggtcacagactgaatatgaggtctgcgagaatgtgggcatgttgcccttggaa
attaccagaaggggatattccatggactcagccttcgtgagtgtaaaggtcaaccaagtg
tcagctacagttggaaaagacttcattctgactccatctaaactgattcagtttgaccca
ggaatgtcaactaagatgtggaatatagcaattacctatgacggattagaggaagacgat
gaggcctttgaagtaattctgaactcccctgtgaatgcggttcttggcacaaagacaaaa
gctgcagtgaaaattctggactcaaaaggagggcagtgccatccttcatattccttcaac
cccaacaagcacaatgcacggaagaagggcatttggcacctgctgtccccagggtcttcc
tcacccaccacttctggttcctttcatctggaaagaagaccccttacatctaacaagtgg
ccggcagtcactaggggagacacccgacagggctttgagtctccagatctttctcgtatg
aagcttaggacccgggggaatggcaaaacggttcttccatcctctgtttatagaaatgga
accgacatcatctataattatcacggaacggtttccctgacactggaggaggacggctct
ccatctcaccaacggaaggccaaagtatccattattcgtcagttaccaaagacaagcaga
gaggcagagctgcctcaggcagataaggacccgctgccctcatttccaaagaactgcaca
ctggaattaaagggacttttccatttccaagaaagcctccgaaagctgtacaaatgtgat
ggagttacgtggaaagcttggagctcccaaagcgaggaggtggaacgtaaatcctgccca
gctggttggcaccatcactcaggctactgccactccctgatcacagagcagaaagcctcc
tggaacacagctgcccgagcttgcaaggaacatcacctgggcagcctcgtaacagttctc
tctagacgacacatgcgatggctctgggacatcagtggagggaaacccttctggataggt
ttgaatgaccgagtgcgtgctggccgctgggagtggatcggcggggaacctgtcaccttc
accacctggaggaaagggccccctcaacgtttaaagcgtggcaagaactgcgttttggct
cggagacaagggaaatggcaaacacaggactgtgggaagggcaaggctcacaattacatg
tgctccaggaaactctaa
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