Mirounga leonina (Southern elephant seal): 117999198
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Entry
117999198 CDS
T07472
Symbol
TRIM50
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50 isoform X1
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
mlx
Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mlx04121
]
117999198 (TRIM50)
Ubiquitin system [BR:
mlx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117999198 (TRIM50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
U-box
zf-Nse
Prok-RING_4
TRIM_CC
Baculo_IE-1
Sina_RING
zf-RING_4
zf-ANAPC11
zf-RING_6
zf_RING_Vps8_fungal
COG2_N
DUF7960
DUF1644
DUF7575
CcmH
Motif
Other DBs
NCBI-GeneID:
117999198
NCBI-ProteinID:
XP_034844040
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MAWQVSVPELEDRLQCPICLEVFKEPMMLQCGHSYCKGCLVSLSRHLDSELRCPVCRQEV
DSSSSPPNVSLARVIEALQFPGGPEPKVCEHHRNPLSLFCERDQELICGLCGLLGSHQHH
RVTPVSTVYSRMKEDLAALISDLKQEQKKVDEHIAKLVNNRTRIVNESDVFSWVIRREFQ
ELHHLVDEEKARCLEGLEGHTRGLVASLDMQIEQAQGSQERLVQAEHVLEQFSNESHHEF
IRKYHSMASRAELQQARPLEGTFSPISFKPGLHQADIKLTVWKRLFRKVLPAPESLKLDP
ATAHPLLELSKGNTVVQCGLLAQRRASQPERFDYSTCVLASRGFSWGRHYWEVVVGNKSD
WRLGVIKGTVSRKGKLSKSPENGVWLIGLKEGRVYEAFGCPRVPLPVAGHPHRIGVYLHY
EHGELTFFDADRPDDLRLLYTFQADFQGKLYPILDTCWHERGSNALPMVLPPPSGPAHLT
PPQPTKL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggcaggtgagtgtccctgagctggaggaccgccttcagtgccccatctgcctg
gaggtcttcaaggagcccatgatgctgcagtgtggccactcctactgcaagggctgcctg
gtgtccctgtcccgccacctggactcggagctccgctgcccagtgtgccgacaggaggtg
gatagcagcagctccccgcccaacgtctccctggcacgggtgattgaagccctacagttc
cctgggggcccagagcccaaggtctgtgagcaccaccggaacccgctcagcctcttctgt
gagagggaccaggagctcatctgtggcctctgtggcctgctgggctcccaccagcatcac
cgcgtcacgcctgtctccactgtctacagccgcatgaaggaggacctagcggctctcatc
tctgacctgaagcaggagcagaagaaggtggatgagcatattgccaaactggtgaacaac
aggacccggattgtcaatgaatctgatgtcttcagctgggtgattcgtcgtgagttccag
gagctgcaccacctggtggatgaggagaaggcccgctgcctggaggggttggagggtcat
acccgtggcctcgtggcctccctggacatgcagatagagcaggcccagggcagtcaggag
cggctggtccaggccgagcacgtgctggagcagttcagtaatgagagtcaccatgagttc
atccggaagtatcactccatggcctccagagcagagctccagcaggcccggcctttggaa
ggcaccttcagccccatctccttcaagccaggcctccaccaggctgacatcaagttgacc
gtgtggaagaggctcttccgaaaagttctgccagccccggagtccctcaagctagaccct
gccaccgcccaccccctcctggaactctccaagggcaacacggtggtgcagtgcggcctt
ctggcccagcggcgtgccagccaacccgagcgctttgactacagtacttgcgtcctggcc
agtcggggcttctcctggggccgtcactactgggaggtggtggtgggcaacaagagcgac
tggcgcctgggggtcatcaagggcacagtgagtcgcaagggcaagctgagcaagtcccca
gagaacggcgtgtggctcattggcctgaaggagggccgggtgtatgaggcctttggctgc
cctcgggtgcccctgcctgtggccggccacccccaccgcatcggcgtctacttgcactat
gagcacggagagctcactttctttgatgctgaccgccccgatgacttgcggctgctctac
acattccaggctgacttccagggcaagctctaccccatcctggacacatgctggcacgaa
aggggcagcaatgcactgcctatggtgttgcccccgcccagcgggcctgcccacctcacc
cccccacagcccaccaagctgtag
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integrated database retrieval system
