Mirounga leonina (Southern elephant seal): 117999342
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Entry
117999342 CDS
T07472
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mlx01002
]
117999342 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mlx04121
]
117999342 (USP42)
Enzymes [BR:
mlx01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117999342 (USP42)
Peptidases and inhibitors [BR:
mlx01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117999342 (USP42)
Ubiquitin system [BR:
mlx04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117999342 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
117999342
NCBI-ProteinID:
XP_034844238
LinkDB
All DBs
Position
Unknown
AA seq
1333 aa
AA seq
DB search
MTIVDKASESSDPSAYQNQPGSSEAVSPGDMDAGSASWGAVSSLNDVSNHTLSLGPVPGA
VVYSSSSVPDKSKPSPQKDQALGDGIAPPQKVLFPSEKICLKWQQTHRVGAGLQNLGNTC
FANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPGDVIKPMFVI
NEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRS
RVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPA
SKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVL
VHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSHDVKNGGE
LTHPTHSPGQSSPRPVISQRVVNNKQAASGFIGPQLPSHVIKNPPHLNGTGPLKEAPSSS
MSSPSGNSSVSRAGSVNASTSVQNWSVNRPSVIPEHPKKQKITISIHNKLPVRQGQSQPN
LHSGSLENPAKPVPSSTVTNSSAIQSTSSAPTMAVSSKVTKQMTPSESCSKPVMNGKSKL
NSSVLVPYGAESSEESDEEAKGLGKENGLGTIESSNSSVQDAEDDEASPLELHEPLALNG
ADIMDSDLKENGLSCDGASCQVPPALPAENPFAKVNGLPGKLMPAPLPPPPEDKILETCK
LSNKGKGSTEETSAPGTEDGPAEDPGAEREAGSPSPESREKLETLTSLSSKLKKALPPLD
PSIKSTKEEVSENVLAKPEESLPSADTLHSSTKNTTGDDGLPKLCGPGGLTGDKSRPPQA
VPGVVVESPRASAAVDTAGSSSPSPPVRSEGACEHELLVYISRDACTDLEDRPRSTGAAA
EASPSPQVDKVTEHHSEGGPEQSNGEKCEENKVGQKVPDHSPVKEKISILRKVDRGHYRT
RRDRSSSGERARESRSRTGERCRGKRRSSVRERARRERPRTEHCGGGPHPPGRSERLSPG
EPRSLGRYGHRHSRSRGGSDQEWGRYPHSESEHSWGREKYYPDRPRWDKCRYYHDRYAPY
AAREAREWKPFHGARDYAKAGPSGGRPCRDYYRGRKGYELLAKGRDRHRFGSPRAGPPHA
LLPYPEKYPHEKIALVAEDTNCNLADRFHEHENAKSRKRRYDSMENSDGHVEKKAWRSFQ
KDPLEEPKVKKHKKSKKKKKSKDKHRGRDSRRQQDSDLSVAYSDADLHRHKKKKKKKKRH
SRRSEDLVKDSEPHLPKAASHETVDRFRRTDGAFPLTDGLPLEGVGPFREKRKHLRMGSR
DDRCPLSECGQGD
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaagcttctgaatcttcagacccatcagcctatcagaatcagcct
ggcagctcggaggcggtctcacctggagacatggatgcaggttctgccagctggggagct
gtgtcttcgctaaatgatgtttcaaatcacacactttctttaggaccagtacctggtgct
gtagtttattcaagttcatctgtacctgataaatcaaaaccatcaccacaaaaggatcaa
gccctaggtgatggcattgctcctccacaaaaagttcttttcccatctgagaagatttgt
cttaagtggcaacagactcacagagttggagccgggctccagaatttgggcaatacctgt
tttgccaatgcagcactgcagtgtttgacttacacgccacctcttgccaattacatgcta
tctcatgaacactccaagacatgtcatgcagaaggattttgtatgatgtgtacaatgcaa
gcacatatcactcaggcactcagtaatcctggggatgttattaagccgatgtttgtcatt
aacgagatgcggcgtatagctaggcacttccgctttggaaaccaagaagatgcccacgaa
ttccttcaatacactgttgatgctatgcaaaaagcatgcttgaatggcagcaataaatta
gacagacacacccaggctaccaccctcgtttgtcagatatttggaggatacctaagatct
agagtcaagtgtttaaattgcaaaggtgtctcagatacgttcgatccatatcttgatata
acgttggagataaaggccgctcagagtgtgaacaaggcactggagcagtttgtgaagcca
gagcagctcgacggggaaaactcttacaagtgcagcaagtgtaaaaagatggttccagct
tcaaagaggttcactatacacagatcctctaatgttcttacactttctctgaaacgtttt
gcaaattttactggtgggaaaattgctaaggatgtgaaatatcctgaataccttgacatt
cgaccatacatgtctcaaccgaacggagaaccgatcatctatgttctgtacgcggtgctg
gtacacaccggctttaactgccacgccggccattacttctgctacatcaaagctagcaat
ggtctctggtaccagatgaatgactccatcgtgtctaccagtgatattagatcggtactc
agtcaacaagcttatgttctcttttatatcaggtcccacgatgtgaaaaatggaggtgaa
ctcactcatcccactcacagccccggccagtcctcgccccgacccgtgatcagccagcgc
gttgtcaacaacaaacaggctgcgtcaggctttatcggaccacagctcccctctcacgtg
ataaagaacccacctcacttaaatgggaccgggccattgaaagaagcaccaagcagttcc
atgtcgagtcctagtggaaattccagtgtcagccgggctggttctgttaatgcttcgact
tctgttcaaaactggtccgttaacaggccctcagtgattccagaacatcccaagaaacaa
aaaatcacgatcagtattcacaacaagttacctgttcgccaaggccagtctcagcctaac
cttcacagcggttctttggagaacccagccaagcctgttccctcttctaccgttaccaat
tcttctgcaatacagtctacctcgagcgcacctacaatggcagtttctagtaaagtcaca
aagcagatgaccccgagcgagtcctgttccaagccggtgatgaacggcaagtccaagctg
aactccagtgtcctggtgccctatggcgccgagtcgtccgaagagtctgacgaggaggcg
aagggcctaggcaaggagaatggtctcggtacgatcgagagctcgaactcttctgtgcag
gatgcagaagatgacgaggcctctccgctcgagcttcacgagccccttgctctaaatggt
gctgacattatggacagcgacctgaaggaaaacggtctgtcttgtgatggtgccagttgc
caagtcccgcctgctctacccgcagaaaatccctttgctaaggtgaatggcctgcccgga
aagttgatgcccgctcctctgccgcctcccccagaagacaaaatcttagagacttgcaaa
ctcagcaacaaagggaaaggctcgacagaagaaaccagcgcgcctggaacagaggacggt
cctgcggaggatcccggcgcagagcgggaggccggcagtccgtctcccgagtcccgtgag
aaactggagaccctcacgagccttagcagcaagttaaagaaggctttgccacccttagac
cccagcatcaaatctaccaaagaagaagtctcagaaaacgttttagcaaaacccgaggag
tctttgcccagtgccgacactcttcacagcagtactaagaacaccacgggggatgatggg
ctccctaaactgtgtggccccgggggtttaacaggtgacaagagcagaccgccccaggcc
gtaccgggggtggtggtagagagcccacgggcctcagccgcagtggacacagcggggagt
tcaagcccaagtccccccgtacgctccgagggtgcctgtgagcacgaactcttagtctac
atcagtcgagacgcgtgcacggacttggaggaccgtcctcggagcacaggtgcggctgcg
gaggcctcgccctctcctcaagtagacaaggtcacagaacatcattcagaagggggcccc
gaacaaagtaacggggagaaatgtgaagaaaataaggtgggacaaaaagttccagatcat
tctccagttaaggaaaaaatcagcatcctcagaaaagtcgatcgagggcattaccgcacc
cggagagaccgttcctcgagcggggagcgcgcgagggagagcaggagccggaccggggag
cgctgccgcgggaagcggcgctcgtccgtgcgggagcgggccaggcgggagcgccccagg
acggagcactgcggcgggggcccgcacccccccggccgcagcgagaggctcagccccggc
gagccccgctccctgggcaggtacggccaccggcactcccgcagcagaggcgggtcggac
caggagtggggccggtacccgcactcggagagcgagcactcctggggccgggagaagtac
tacccggacaggccgcggtgggacaaatgcaggtattaccacgacaggtacgccccgtac
gcggccagggaggcgcgcgagtggaagcccttccacggcgcccgcgactacgccaaggcg
ggcccgtccggcggccggccctgcagggactactataggggcaggaagggctacgagctg
ctcgccaagggccgggaccggcaccgcttcggcagcccccgggcgggcccgccccacgcc
ctcctcccgtaccccgagaagtacccccacgagaaaattgcacttgtagccgaagacacc
aattgtaacctcgccgatcggtttcacgaacacgagaacgccaagtcccggaaacggaga
tacgacagcatggagaacagcgacggtcatgtcgagaagaaggcctggaggagcttccag
aaggatcccttggaagagcctaaagtgaagaagcacaaaaaatcaaagaagaaaaagaaa
tccaaagacaaacaccgaggccgcgattccaggcgtcagcaggactccgatctgtcagta
gcgtactccgacgctgatctccacagacacaaaaagaagaagaagaaaaagaagaggcac
tccaggagatccgaggacttggttaaagactcagaaccgcacctgcccaaggccgccagc
catgagactgttgaccgtttccggagaactgacggcgctttccccctcaccgacggcctg
cctctggaaggtgttgggcctttccgtgagaagagaaaacacttaaggatgggaagcagg
gatgacaggtgtcctctgtctgagtgtggccagggtgattga
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integrated database retrieval system
