Mirounga leonina (Southern elephant seal): 117999526
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Entry
117999526 CDS
T07472
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117999526 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mlx04131
]
117999526 (RABGEF1)
Membrane trafficking [BR:
mlx04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117999526 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
117999526 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
SSTK-IP
Motif
Other DBs
NCBI-GeneID:
117999526
NCBI-ProteinID:
XP_034844620
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAER
LQREEEEAFASSQSGPGAQSLTFSKFEEKKTNEKTRKVTTVKKFFSASSRVGSKKAEIQE
AKAPSPSINRQASIETDRVSKEFIEFLKTFHKTGQEIYKQTKMFLETMHYKRDLSIEEQS
ECTQDFYQNVAERMQTRGKVPSERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQ
KRIRALHWVTPQMLCVPVNEEISEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIF
NAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMAGEDGYYFTNL
CCAVAFIEKLDAQSLNLSQEDFDRYMSGQTSPRKQESENWSPDACLGVKQMYKNLDLLSQ
LNERQERIMSEAKKLEKDLIEWTDGIAKEVQDIVEKYPLEIKAPNQSLAAIDSENVENDK
LPPPLQPQVYAG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagccttaagtctgaacgccgaggaattcatgtggatcagtcagagctcctttgcaag
aaaggatgtggttactatggcaaccctgcttggcagggtttctgctccaagtgctggagg
gaagagtaccacaaagcaaggcagaagcagattcaggaggattgggaactggcagagcga
cttcagcgggaggaggaagaggcctttgccagcagtcagagcggcccaggggcccagtcc
ctcacattttccaagtttgaagaaaagaaaaccaatgagaagacccgcaaagttaccaca
gtaaagaaattcttcagtgcttcatccagggttggatcaaaaaaggcagaaattcaggaa
gcaaaagctcccagtccttccataaaccggcaagccagcattgaaacggatagagtgtct
aaagagttcatagaatttctcaagaccttccacaagacaggccaagaaatctataagcag
accaagatgtttttggaaacaatgcattacaaaagggatttaagcattgaggaacagtca
gagtgtactcaggatttttaccagaatgtggctgaaagaatgcagactcgtggaaaagtg
ccttcagaaagagttgagaagataatggatcagatcgaaaagtacatcatgactcgtctc
tataaatatgtgttctgtccagaaactacagatgatgagaagaaagatctcgctattcaa
aaaaggatcagagccttgcactgggttacacctcagatgctttgtgtccctgttaatgaa
gaaatttcagaagtatctgatatggtggtgaaagcaatcacagatatcattgaaatggat
tcaaagcgtgtgcctcgagacaagttggcttgcatcaccaagtgcagcaagcacatcttc
aatgccattaagatcaccaagaatgagccagcctcagctgatgactttttaccaactctc
atctacattgtcttgaagggcaaccccccacgccttcagtccaacatccagtatatcacc
cgcttctgcaacccaagccgattgatggctggggaggatggctactatttcaccaatctg
tgctgtgctgtggctttcattgagaaattagatgctcagtctttgaatttaagtcaggaa
gattttgatcgatacatgtccggccagacttctcccaggaagcaggaatctgagaattgg
tctcctgatgcttgcttaggggttaagcaaatgtataagaacttggatcttctgtctcag
ttgaatgaacggcaagaaaggatcatgagtgaagccaagaaacttgagaaagacctaata
gagtggacggatggaattgcaaaagaggttcaagacattgttgagaaatacccgcttgaa
attaaagccccaaatcaatctttagcagctattgactctgaaaatgttgaaaatgataaa
cttcctccacctttgcaacctcaagtttatgcaggatga
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