Mirounga leonina (Southern elephant seal): 117999653
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Entry
117999653 CDS
T07472
Symbol
ATXN2L
Name
(RefSeq) ataxin-2-like protein isoform X1
KO
K23625
ataxin 2/2L
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx05014
Amyotrophic lateral sclerosis
mlx05017
Spinocerebellar ataxia
mlx05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
117999653 (ATXN2L)
05017 Spinocerebellar ataxia
117999653 (ATXN2L)
05022 Pathways of neurodegeneration - multiple diseases
117999653 (ATXN2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlx03019
]
117999653 (ATXN2L)
Messenger RNA biogenesis [BR:
mlx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117999653 (ATXN2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
117999653
NCBI-ProteinID:
XP_034844865
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MLKPQPPQQTSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLASTSAPAGPPAAASPCLG
PAAAAGSGLRRGAEGILAPQPPPPQQHQERPGATAIGSARGQSTGKGPPQSPVFEGVYNN
SRMLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDIV
DTMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDD
YDLESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLA
REIESSPQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLASREGKYIPLPQRVREGP
RGGVRCSSSRGGRPGLSSLPPRGPHHLDSSSPGPGSETRGINGGPSRMSPKAQRPVRGGA
KTLSSPSSRSSGEASAPPPPAAFPFLPVGRMYPPRSPKSAAPAPISASCPDAPMGSAVPT
SSASIPVTSSVVDPGVGSISPASPKISLAPTDVKELPAKEPGRTLESQELSRIAGKVPGL
QNEQKRFQLEELRKFGAQFKLQPSSSPETSLDPFPPRILKEEAKGKEKEVDGLLTSEPVG
SPVSSKTESVSDKEDKPPLPPAGGTEGPEQPPPPCPSQTGSPPVGLIKGDDKDEGPVAEQ
VKKSTLNPNAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISY
IPQIHMGPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAA
AGPPLVAATPYSSYIPYTPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQA
IVSSSTPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSP
VQHQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHAHQQ
LPHGFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPA
LSASTPSPYPYIGHPQVCRVGRSHSRRRQGLAPGSVLCFPPSSLSCDPAAPLPTASPALS
DPDCLLT
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcctcagccgccacaacagacctcccagccccagcagccgccccccacgcaa
caggccgtggcccgccggcctcccgggggcaccagccctcccaacggcggcctcccgggg
cccctggcctccacctcggctcccgcagggcctcccgcggccgcttctccctgcctgggg
cctgcagccgccgccgggagcgggctccgccggggagccgagggcatcttggcgccgcag
ccgccgccgccgcagcaacaccaggagaggccaggggcgacggctatcggcagcgccagg
ggacaaagcacaggaaagggacccccacagtcaccggtgttcgaaggtgtctacaacaat
tccagaatgctgcattttcttacagctgttgtgggctccacttgtgatgtaaaggtgaag
aatggtaccacctatgaaggtatcttcaagactctgagctcaaagtttgaactagcagta
gatgctgtacaccggaaagcatctgagccagcaggtggccctcgtcgggaagacattgtg
gacaccatggtgtttaagccaagcgatgtcatgcttgtccacttccgaaatgttgacttc
aattatgctactaaagacaaattcactgattcagccattgccatgaactcaaaagtgaat
ggggagcacaaagagaaggtgcttcagcgctgggaagggggcgacagcaacagcgatgac
tatgacctcgagtctgacatgtccaatggatgggaccccaacgaaatgttcaagttcaac
gaggagaactatggtgtaaagaccacctatgacagcagtctttcttcttacacggtgccc
ttggagaaggacaactcagaagagtttcgtcagcgggagctgcgtgcagcccaattagct
cgagagattgaatcaagcccccagtaccgcctgcggatcgccatggagaacgatgatggg
cgcaccgaggaggagaagcacagtgcggtccagcggcagggttcaggacgggagagcccc
agcttggcatctagggagggaaagtatatccctctaccccagcgagttcgggaaggtccc
cggggaggagttcgatgcagtagttcccggggtggccggcctggccttagctctttgcca
cctcgtggccctcaccaccttgacagtagcagccccggcccaggttctgagacacgtggt
atcaatggaggcccttcccgcatgtcccctaaggcacaacggcctgtgagaggtggtgcc
aagactctgtcctcacccagcagtaggtcttctggagaagcttccgctccgccccctcct
gcagctttcccttttcttccagtgggccggatgtaccccccgcgctctcccaagtcggct
gcccctgccccaatctcagcttcctgtcctgatgcccccatgggctcggcagtaccgacc
tcttcggcttctatccctgtgacatcatcagttgtggatcctggagtaggctccatttcc
ccagcttctccaaagatctcattggcccccacagatgtaaaagaacttccagccaaggaa
cctgggagaactctggagtcccaggagctgtcccggatagctgggaaagtccctggcctt
cagaatgaacagaaacgctttcaactggaagaactgagaaagtttggggcccagtttaag
ctgcagcccagtagctcccctgagaccagcctggatccttttcctccccggatcttaaag
gaggaggccaaagggaaagagaaggaggtcgatggtttattaacgtcagagccagtgggg
tccccagtctcctcgaagacggagtctgtatcggataaggaggacaagccgcccctgccg
ccggcaggaggcacagaggggcccgagcagcccccgccaccttgcccaagccagactggc
agccccccggtaggcctcatcaagggagacgacaaggacgagggcccggtcgctgaacaa
gtgaagaagtcaacactgaaccccaacgccaaggagttcaatcccacaaagcctctgctg
tctgtgaataaatccaccagtaccccgacttctccggggccccggactcattcaactccc
tccatcccggtgctgacagcaggccagagtgggctctacagcccccagtacatttcctac
atacctcagatccacatgggaccagctgttcaggcacctcagatgtatccataccctgta
tccaattctgtgcctggacagcagggcaagtaccggggagcaaaaggctccctgcccccc
cagcgctcggaccaacaccagccagcctcagcccctccgatgatgcaggccgccgccgct
gctggcccacctctggtggctgccacgccgtactcttcctacatcccttacaccccacag
cagttcccgggccagcccgccatgatgcagcccatggcccactacccctcgcagccagtg
tttgcccccatgcttcagagcaacccacgcatgctgacgtcggggagtcatccccaggcc
attgtgtcgtcctccacccctcagtacccttctgcagagcagcccaccccccaagccctc
tatgccactgttcaccagtcctatccacaccatgccacgcagctccatgcccaccagccg
cagccggccaccacacctactgggagccagccgcagtcccagcatgcggcccccagtccc
gtccagcaccaggcggggcaggccccacacctgggcagtggacagccacagcagaatctg
taccacccaggggccctgacaggcacgccgccttctctgccaccgggaccttctgcccag
tcccctcagagcagcttcccccaaccagccgctgtatatgccatccatgcccatcagcag
ctgccccacggcttcaccaacatggcccatgttacccaggcccatgtccaaactggaatc
acagcagccccgccccctcaccctggggctccccacccgccccaggtgatgctgctgcac
ccaccccagagccatgggggccccccccaaggcgcggtgccccagagtggggtgcctgca
ctctcagcttccacaccctcaccctacccctacatcggacacccccaagtatgtagggtg
ggcagaagccacagtcgccgccgccaggggcttgctcctggctctgtcctttgcttccct
ccgtcctcgctcagttgtgatccagcagcccccctccccactgcctccccagctctcagt
gaccccgactgtctcctgacttag
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