Mirounga leonina (Southern elephant seal): 118000189
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Entry
118000189 CDS
T07472
Symbol
CFAP52
Name
(RefSeq) cilia- and flagella-associated protein 52 isoform X1
KO
K24728
cilia- and flagella-associated protein 52
Organism
mlx
Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mlx03037
]
118000189 (CFAP52)
Cilium and associated proteins [BR:
mlx03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
118000189 (CFAP52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_MABP1-WDR62_1st
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_VPS8
PQQ_2
WDR54
Beta-prop_NOL10_N
DUF7082
Motif
Other DBs
NCBI-GeneID:
118000189
NCBI-ProteinID:
XP_034845712
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MRTSVTIPTRRRCAAGGPEAGEPSLLRMENQIPLRAEVAELELEAVIGFNGHVPSGLKCH
PDQEHLIYPLGCTILIQAINTQEQNFLHGHGNNVSCVTISKSGAYIASGQVTFMGFKADI
ILWDYKKRELIARLSLHKGKIEALAFSPNDLYLASLGGPDDGSVVVWSIAKREAICGSPA
AGLNVGNATTVIFSTCRDEMFVTAGNGTIRVWELDLQNRKIWPTECQTGQMKRIVMSITM
ADDGSFFYLGTTTGDILKMNPMTKLLADAGPAKDKFSLGVSAIKCLKMAGLLVGSGAGLL
VFCKSPSYKPIKKIQLQGGVTSITVRGEGHQFFVGTEESHIYRVNFTDFKETLIATCHFE
ALQDIVFPFSTAELFATCAKRDIRVWHTLSNRELLRITVPNMTCHGIDFMRDGKSIISAW
DDGRIRAFAPETGRLLYVINNAHRIGVTAIATTSDCKRVISGGGEGEVRVWQIGCQTQKL
EEALKEHKSSVSCIRVKKNNEECVTASTDGTCIIWDLVRLRRNQMILANTLFQCVCYHPE
EFQIITSGTDRKIAYWEIFDGSVIRELEGSLSGSINGMDITLEGVHFVTGGNDHLVKVWD
YNEGEVTHVGVGHSGNITRIRVSPGNQYIVSVSADGAILRWKYPFTS
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacgtccgttaccataccgaccaggagacgctgcgccgctggaggcccagaggcg
ggagagcccagtctcctgaggatggagaaccaaattccgctcagagccgaggtggccgag
ctggagcttgaggccgtgatcggcttcaacgggcacgtgccttctggcctgaaatgccat
cctgaccaggagcatctgatttaccctctgggctgcacaatcctgattcaggcaataaac
acacaggaacagaacttcctgcacggtcacggcaacaatgtctcctgtgtgaccatctcc
aagagtggggcttacatagcctccggacaggtcacgttcatgggcttcaaggcagacatc
attttgtgggattataagaaaagggagctgattgcccgactgtcacttcacaagggcaaa
attgaagcgctggccttttcaccaaatgatttgtacttggcatcactcggaggcccagat
gacggaagtgtggtcgtgtggagcatagccaagagagaagccatctgtggcagtcctgcg
gccggcctcaacgtggggaatgccaccacagtgatcttctcgacgtgccgggatgagatg
tttgttactgctggaaacgggacaatccgagtatgggaactggatcttcagaatagaaaa
atctggccaactgagtgccaaacgggtcagatgaaaagaatagtcatgagtattacaatg
gctgatgacggtagctttttctacctcggcaccacaactggagacattctgaaaatgaac
ccaatgaccaaactgctagcagatgctgggcccgcgaaggacaagttcagtctgggagtg
tccgccatcaagtgcctgaagatggcgggtttgttggtgggttccggagccggattgctg
gtcttctgcaaaagccccagctacaaacccatcaagaaaatccagttacaaggtggcgtc
acgtcaatcacagttcgaggggaaggacaccagttttttgtaggaacagaagaatcacac
atttatcgtgtcaacttcacggatttcaaagagactctcattgcaacttgtcactttgaa
gctctccaggacattgtcttcccattcagtaccgccgaactattcgccacctgtgccaag
agggacatcagggtgtggcacacgctgtccaaccgggagctgctgcgcatcactgtgccc
aacatgacctgccacggcatcgatttcatgagggacggcaagagcatcatctcggcatgg
gacgatgggagaatccgagccttcgccccagagacaggtcggctgctatatgtcattaac
aatgcccacaggatcggagtgacagccatcgctaccaccagtgactgtaaacgggtcatc
agcggcggcggggaaggcgaggtgagggtctggcagatcggctgccagacccagaagctg
gaggaggccctgaaggagcacaaatcctctgtgtcctgcatcagggtgaagaagaacaac
gaggaatgtgtcacagccagcacggacgggacttgcatcatctgggacctcgtacgtctc
cggaggaatcagatgatcctggcgaataccttattccagtgtgtttgttaccaccccgaa
gagttccagatcatcaccagcgggacagacagaaagattgcttactgggaaatctttgat
gggtcagtaatcagagagttggaaggttccttgtctgggtccatcaatggaatggatatc
accctggaaggagtgcactttgtcacaggtggaaatgaccatctggtcaaagtgtgggat
tataatgagggtgaagtgactcatgtcggggtaggacacagcggcaacatcacccgcatc
cgggtaagtccaggaaatcagtacatcgttagtgtaagtgctgatggagcgattctgaga
tggaagtacccctttacctcctga
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