Mirounga leonina (Southern elephant seal): 118001622
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Entry
118001622 CDS
T07472
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
KO
K08525
retinoid X receptor beta
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03320
PPAR signaling pathway
mlx04659
Th17 cell differentiation
mlx04919
Thyroid hormone signaling pathway
mlx04920
Adipocytokine signaling pathway
mlx04928
Parathyroid hormone synthesis, secretion and action
mlx05200
Pathways in cancer
mlx05202
Transcriptional misregulation in cancer
mlx05207
Chemical carcinogenesis - receptor activation
mlx05216
Thyroid cancer
mlx05222
Small cell lung cancer
mlx05223
Non-small cell lung cancer
mlx05226
Gastric cancer
mlx05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
118001622 (RXRB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
118001622 (RXRB)
03320 PPAR signaling pathway
118001622 (RXRB)
04919 Thyroid hormone signaling pathway
118001622 (RXRB)
04928 Parathyroid hormone synthesis, secretion and action
118001622 (RXRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
118001622 (RXRB)
05202 Transcriptional misregulation in cancer
118001622 (RXRB)
05207 Chemical carcinogenesis - receptor activation
118001622 (RXRB)
09162 Cancer: specific types
05226 Gastric cancer
118001622 (RXRB)
05216 Thyroid cancer
118001622 (RXRB)
05222 Small cell lung cancer
118001622 (RXRB)
05223 Non-small cell lung cancer
118001622 (RXRB)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
118001622 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mlx03000
]
118001622 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mlx03310
]
118001622 (RXRB)
Transcription factors [BR:
mlx03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
118001622 (RXRB)
Nuclear receptors [BR:
mlx03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
118001622 (RXRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
118001622
NCBI-ProteinID:
XP_034847764
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAAAGEQQTP
EPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPQGAPPPSPPGLPLPPSAASSLGGSGAPPP
PPMPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKP
PVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSC
RDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPV
DRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFS
SLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRSL
SRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQ
KYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctgctcgcccgcccttcctcccccagcggcatgccgcagggcagtgtggg
ccggtgggggtgcgaaaagaaatgcattgtggggtcgcctcccggtggcggcggcgacgg
ccctggctggatcccgcagcggcggcggcagcggcagcagccggagaacaacaaaccccg
gagccggagccgggggaggctggacgggacgggatgggcgacagcgggcgggactcccga
agcccagacagttcctccccgaatccccttccccagggggcccctcccccttctcctcct
gggctacccctacccccgtcagcagcctcatcccttggaggttccggggccccaccccca
cccccgatgccaccccccccactgggctcccctttcccggtcatcagctcttccatgggg
tcccctggtctgccccctccagctcccccaggattctccgggcctgtcagcagtccccag
attaactcaacagtgtcgctccctgggggtgggtctggcccccctgaagatgtgaagcca
ccagtcttaggggtccggggcctgcactgtccaccccctccaggtggccctggggctggc
aaaaggctttgtgccatctgcggggaccgaagctcaggcaaacactatggggtttacagc
tgtgagggctgcaaaggcttcttcaagcgcaccatccgtaaggacctgacctactcgtgc
cgggacaacaaggactgcaccgtggacaagcgccagcgcaaccgctgtcagtactgccgc
taccagaagtgcctggccaccggcatgaagagggaggcggtacaggaggagcgtcagcgg
gggaaggacaaggacggggatggggagggggctgggggagcccccgaggagatgcctgtg
gacaggatcctggaggcggagcttgctgtggagcagaagagtgaccagggcgttgagggt
cctgggggaaccgggggtagcggcagcagcccaaatgaccccgtgactaacatctgtcag
gcagctgacaaacagctattcacgcttgttgagtgggcgaagaggatcccacacttttcc
tccttgcctctggatgaccaggtcatattgctacgggcaggctggaatgagctcctcatt
gcttccttctcccaccgatccattgatgtccgagatggcatcctcctcgccacaggtctt
catgtgcaccgcaactcagcccattcggcaggcgtgggagccatctttgatcggtccctc
tccagggtgctgacagagctagtgtccaaaatgcgtgacatgaggatggacaagacagag
cttggctgcctgagggcaatcattctgttcaatccagatgccaagggcctctccaaccct
agtgaggtggaggttctgcgggagaaagtgtacgcttcactggagacctattgcaagcag
aagtaccctgagcagcagggacggtttgccaagctgctgctacgtcttcctgccctcaga
tccatcggccttaagtgtctagagcatctgtttttcttcaagctcattggagacaccccc
attgacaccttcctcatggagatgcttgaggctccccaccagctggcctga
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