Mirounga leonina (Southern elephant seal): 118001778
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Entry
118001778 CDS
T07472
Name
(RefSeq) thrombospondin-2 isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04145
Phagosome
mlx04151
PI3K-Akt signaling pathway
mlx04510
Focal adhesion
mlx04512
ECM-receptor interaction
mlx04820
Cytoskeleton in muscle cells
mlx05144
Malaria
mlx05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
118001778
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118001778
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118001778
09144 Cellular community - eukaryotes
04510 Focal adhesion
118001778
09142 Cell motility
04820 Cytoskeleton in muscle cells
118001778
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
118001778
09174 Infectious disease: parasitic
05144 Malaria
118001778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mlx04131
]
118001778
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mlx04147
]
118001778
00536 Glycosaminoglycan binding proteins [BR:
mlx00536
]
118001778
Membrane trafficking [BR:
mlx04131
]
Endocytosis
Phagocytosis
Opsonins
118001778
Exosome [BR:
mlx04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118001778
Exosomal proteins of colorectal cancer cells
118001778
Exosomal proteins of bladder cancer cells
118001778
Glycosaminoglycan binding proteins [BR:
mlx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118001778
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
Laminin_G_3
TSP1_ADAMTS
Laminin_G_2
EGF
cEGF
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
118001778
NCBI-ProteinID:
XP_034847812
LinkDB
All DBs
Position
Unknown
AA seq
1173 aa
AA seq
DB search
MLWTLVLLALWASSGMQAASGQDEDTGFNLFSISNINRKTIGAKQFRGPDPSVPAYRFVR
FDYIPPVNADYLSRIAKIMQQKEGFFLLASLKQDPKSRGTLLALEGPGTSQRQFEIVSNG
PADTLDLTYWIDGTQHVISLEDVGLADSQWKNVTVQVTGETYSLYVDCDLIDSFTLDEPF
YEQLQTEKSRMYVAKGSSRESHFRGLLQNVYLVFENSAEDVLSKKGCQQSQGAEANAISE
TTETLHLSPQVAPEYAGPGAHRRPEVCERSCEELGTMITELSGLHVIVNELHENLRKVSN
DNQFLWELIGGLPKTRNMSACWQDGRFFAENETWVVDSCTKCTCKKFKTICHQITCPPAP
CASPSFVEGECCPSCLRSLDSEEGWSPWAEWTECSTSCDSGTQQRGRSCDVTSNTCLGPS
IQTRACSLGKCDNRIRQDGGWSHWSPWSSCSVTCGIGNITRIRLCNSPVPQMGGKNCKGS
GRETKGCQGAPCPIDGRWSPWSPWSACTVTCAGGIRERTRVCNSPAPRHSGKDCVGDVKE
HQMCNKRSCPIDGCLSNPCFPGAQCSSFPDGSWSCGACPVGFLGNGMHCEDLDECTVVTD
VCFATSKAHRCVNTNPGFHCLPCPPRYKGTQPFGVGLEAARTEKQVCEPENPCKDKTHAC
HRHAECIYLGHFSDPMYKCECQTGYAGDGLICGEDSDLDGWPNKNLVCATNATYHCIKDN
CPLLPNSGQEDFDKDGTGDACDEDDDNDGVDDEKDNCQLLFNPRQFDYDKDEVGDRCDNC
PYVHNPAQIDTDNNGEGDACSVDIDGDDVFNERDNCPYVYNTDQRDTDGDGVGDHCDNCP
LVHNPDQTDVDNDLVGDQCDNNEDIDEDGHQNNQDNCPYISNANQADHDHDGQGDACDSD
DDNDGVPDDRDNCRLVSNPGQEDSDGDGRGDACKDDFDNDSIPDIDDVCPENSAISETDF
RNFQMVHLDPKGTTQIDPNWVIRHQGKELVQTANSDPGIAVGFDEFGSVDFSGTFYVNTD
RDDDYAGFVFGYQSSSRFYVVMWKQVTQTYWEDQPTRAYGYSGVSLKVVNSTTGTGEHLR
NALWHTGNTEGQVRTLWHDPKNIGWKDYTAYRWHLTHRPKTGYIRVLVHEGKQVMADSGP
VYDQTYAGGRLGLFVFSQEMVYFSDLKYECRDV
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgctctggacgctggtgctgctcgccctctgggcctcgtctggcatgcaagcagccagt
ggccaggacgaggacacgggcttcaaccttttcagcatcagcaacataaacaggaagacc
attggggccaagcagttccgggggcctgaccccagtgtgcctgcctatcgcttcgtccgc
tttgactacattccgccggtgaacgcagattacctcagcaggatcgccaagatcatgcag
caaaaggaggggttctttctcttggccagcctgaagcaggaccccaagtcccggggcacg
ctcctggctctggagggccccggcacctcccagaggcaattcgaaattgtctccaatggc
ccagcagacacgctggaccttacctactggatagacggcacccaacacgtcatctccctg
gaggacgtgggcctggctgactcccagtggaagaacgtcaccgtgcaggtgaccggggag
acctacagcttgtacgtggactgtgacctgattgacagcttcacgctggatgagcctttc
tatgagcagctccagacagaaaagagcaggatgtacgtggccaagggctcttcgcgagaa
agtcacttcaggggtttgctgcagaatgtctacttagtgtttgaaaattcagcggaagat
gttctgagcaagaaaggttgtcagcaaagtcagggagctgaagccaatgccatcagtgag
accacagagactctgcacctgagcccgcaggtggcccccgagtacgcgggcccaggtgcg
cacaggaggccggaggtgtgtgagcgctcctgtgaggagctgggcaccatgatcaccgag
ctgtcggggctgcacgtcatcgtcaatgagctgcacgagaacctgcggaaagtgtcgaac
gataaccagttcctctgggagctcatcggtggcctgcctaagacgaggaacatgtccgct
tgctggcaggacggccggttcttcgcggaaaatgagacgtgggtggtggacagctgcacc
aagtgcacctgcaagaaatttaaaaccatttgccaccaaatcacctgccccccggccccc
tgcgccagcccatcctttgtggaaggagagtgctgtccgtcctgcttgcgctcgctggac
agcgaggagggctggtccccctgggcagagtggaccgagtgctccaccagctgtgactcg
ggcacccagcagagagggcggtcctgtgacgtcaccagcaacacctgcctggggccgtcc
atccagacgcgggcgtgcagcctgggcaagtgtgacaatcgcatccggcaggacgggggc
tggagccactggtcgccttggtcgtcctgctcagtgacctgcggcatcggcaacatcacg
cgcatccggctctgcaactcgccggtcccccaaatggggggcaagaactgcaaaggaagt
ggccgcgagacgaagggctgccagggcgccccatgtccaatcgacggccggtggagcccc
tggtccccgtggtcagcctgcaccgtcacgtgtgccggcgggatccgggagcggacgcgc
gtttgcaacagccccgcaccgcggcacagcggcaaggactgcgtgggggacgtcaaggag
catcagatgtgcaataagaggagctgccccatagacggctgcttgtccaacccctgcttt
cccggggcccagtgcagcagcttccccgacggctcctggtcctgcggtgcctgccccgtg
ggcttcctgggcaacggcatgcactgtgaggacctggatgagtgcactgtggtcacggac
gtctgcttcgccacgagcaaagcccaccgctgcgtcaacactaacccgggcttccactgc
ctgccatgccctcctcgttacaaagggacccaacccttcggcgtcggcctggaggcggcc
aggaccgagaagcaggtgtgtgagcctgaaaacccgtgcaaggacaagacccacgcctgc
cacaggcacgcggaatgcatctacctggggcatttcagcgaccccatgtacaagtgtgag
tgccagacgggctacgcgggtgacgggctcatctgcggggaggactcggacctggatggc
tggccgaacaagaacctggtctgtgcaaccaacgccacgtaccactgcatcaaggacaac
tgcccactgctgcctaattctgggcaggaagacttcgacaaggatggcaccggggacgcc
tgtgatgaagatgatgacaatgacggtgtggatgatgagaaggacaactgtcagcttctc
ttcaacccccgccaattcgactacgacaaggatgaggttggggaccgctgtgacaactgc
ccgtatgtgcacaaccctgcgcagatcgacacggacaacaacggcgagggggacgcgtgc
tccgtggacatcgacggggacgatgtcttcaatgagcgggacaactgtccctacgtctac
aacactgaccagagagacacggacggggacggtgtgggcgatcactgtgacaactgcccc
ctggtgcacaatcccgaccagaccgacgtggacaatgacctcgtgggagaccagtgtgac
aacaacgaggacatcgatgaggatggccaccagaacaatcaggacaactgcccctacata
tccaacgccaaccaggccgaccacgaccacgatggccagggcgacgcctgtgactcggac
gatgacaatgatggggtccccgacgacagggacaactgccggctggtgtccaacccgggc
caggaggactcagatggggacgggcgtggggacgcttgcaaggacgactttgacaatgac
agcatcccagacatcgatgacgtgtgtcccgaaaacagtgccatcagcgagactgacttc
aggaacttccagatggtccacctggatcccaagggcaccactcagatcgaccccaactgg
gtcattcgccaccaaggcaaggagctggtgcagacggccaactcggaccctggcattgct
gttggttttgatgaatttgggtctgtcgacttcagcggcacgttttacgtgaacaccgac
cgggacgatgactacgccggcttcgtgttcggctaccagtccagcagccgcttctatgtg
gtgatgtggaagcaggtcacgcagacctactgggaggaccagcccacccgggcctacggc
tactctggcgtgtccctcaaggtggtgaactccaccacggggaccggcgagcacctgagg
aacgccctgtggcatactgggaacaccgagggtcaggtccgtacgttatggcacgacccc
aaaaacatcggctggaaagactacactgcttataggtggcatctgacccacagacccaag
acgggctacataagagtcttagtgcatgaaggaaagcaggtcatggcggactcaggacca
gtctacgaccaaacctacgctggcgggcggctgggtctgtttgtcttctctcaagaaatg
gtctatttctccgacctcaaatatgaatgcagagacgtctaa
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integrated database retrieval system
