Mirounga leonina (Southern elephant seal): 118001899
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Entry
118001899 CDS
T07472
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04014
Ras signaling pathway
mlx04015
Rap1 signaling pathway
mlx04024
cAMP signaling pathway
mlx04517
IgSF CAM signaling
mlx04520
Adherens junction
mlx04530
Tight junction
mlx04670
Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
118001899
04015 Rap1 signaling pathway
118001899
04024 cAMP signaling pathway
118001899
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118001899
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
118001899
04530 Tight junction
118001899
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
118001899
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_3
RA_2
PDZ_2
RASSF8-10_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
118001899
NCBI-ProteinID:
XP_034847967
LinkDB
All DBs
Position
Unknown
AA seq
1775 aa
AA seq
DB search
MRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEE
RRLDIDEKPLVVQLNWNKDDREGRFVLKNENDAVPPKKAQSNGPEKQEKEGVIQNFKRTL
SKKEKKEKKKREKEAVRQASDKDDRPFQGDDIENSRLAAEVYKDMPETSFTRTISNPEVV
MKRRRQQKLERRMQEFRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEA
LEKYGLEKENPKDYCIARVMLPPGAQHSDEKGAKEIILDDDECPLQIFREWPSDKGVLVF
QLKRRPPDYIPKKTKKHVDGKLVKGKERAEGSGYGSALPPEKLPYLVELSPDGSDSRDKP
KLYRLQLSVTEVGTEKFDENSIQLFGSGIQPHHCDLTNMDGVVTVTPRSMEAETYVEGLR
ISETTMLQSGMKVQFGTSHVFKFVDPSQDHALAKRSVDAGLTAKGPRHKPGIVQETTFDL
GGDVHSGTALPTSKSTTRLDSDRVLPASSTAERGMVKPVIRGEWQQDYRRQENRTQDAPG
PELILPASIEFRESSEDSFLSAIINYTNSSTVHFKLSPTYVLYMACRYVLSCQYRPDVSP
TERTHKVIAIVNRMVSMMEGVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLS
RITLDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENSLQRPKIDDVLHTLTGA
MSLLRRCRVNAALTIQLFSQLFHFVNMWLFNRLVTDPESGLCSHYWGAIIRQQLGHVEAW
AEKQGLELAADCHLSRIVQATTLLTMDKYAPDDIPNINSTCFKLNSLQLQALLQNYHCAP
DEPFIPTDLIENVVAVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNIP
NGLQEFLDPLCQRGFCRLIPHARSPGTWTIYFEGADYESHLLRENTELAQPLRKEPEIIT
VTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADGDGRLAAGDQLLSVDGRSLVGL
SQERAAELMTRTSSVVTLEVAKQGAIYHGLATLLNQPSPMMQRISDRRGSGKPRPKSEGF
ELYNNSAPNGSPESPQLPWAEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKSAY
APGTTAKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTREYFTFPASKSQDRMAPPQNQW
PNYEEKPHMHADSNHSSIAIQRVTRSQEELREDKAYQVERHRIEAVLDHKSDSDMWIHQS
SSVGSSTSSQEHLDHSSKSGTPASTLTKSGPGRWKTPAAVQPVTVAVSQPVQTDLPPPPP
PPPTHYAGDFDGMPMDLPLPPPPAGQTGPASAQAAAAERRKREEHQRWYEKEKARLEEER
DRKRREQERKLGQMRSQSLNPAPFSPVTVPHVKPEKPSTLQRPQETVIRELQPQQQPRTI
ERRDLQYITVSQEELSSGDSLSPDPWKRDAREKLEKQQQMHIVDMLSREIQELQNKPERS
AEENDRLRKLMLEWQFQKRLQESKQKDEDDEEEEDDDVDTMLIMQRLEAERRARLQDEER
RRQQQLEEMRRREAEDRARQEEERRRQDEERAKRDAEEKRRQEEGYYSRLEAERRRQHAE
AERRLLEPEEPGLCRPPLPRGYELPSPSPPAAAPPPPPQRTASSLQAQTLSPDSLYTARL
VSYHEGEEEEEDCSLAGPNSYMGSAGTAVGAHDAYRDPRERPSKSHDADVPGSSGAPENL
TFKERQRLFSQGQDVSNKVKASRKLTELENELNTK
NT seq
5328 nt
NT seq
+upstream
nt +downstream
nt
atgagattttattttcaagataaagctgctgggaattttgcaacaaaatgcattcgggtc
tctagtactgccaccactcaagatgtgatcgagacgctggcggagaaattccggcctgac
atgcggatgctgtcatcccccaagtactccctctatgaagtgcacgtcagcggagaagaa
agaagattggatatagatgagaaacccctagttgttcagttgaattggaataaagatgat
cgagagggcagatttgttcttaagaatgagaacgatgccgttcctcctaagaaggctcag
agcaatggacctgaaaaacaggagaaagaaggtgttatccagaacttcaagagaactctc
tcaaagaaagaaaagaaggagaaaaagaagagagaaaaagaggcagtgaggcaggcgtct
gataaggacgataggcctttccaaggggatgacattgagaattcccgactggctgctgag
gtttacaaagacatgcctgaaaccagctttacccgaacgatttcgaatccggaggtggtc
atgaagcgtcgccggcagcagaaactagagaggaggatgcaggagttccggagctcggac
gggcggcctgactcaggtggaacattgagaatttatgcagatagtttaaaaccaaatatt
ccctacaagacaatcctgctgtctaccacagatcctgcagactttgctgtggctgaagct
ttagagaaatatggtctggaaaaagaaaatcctaaggattactgcattgcccgggttatg
cttcctcctggagcccagcattctgatgaaaaaggtgctaaagaaattatccttgatgat
gatgagtgtcctttacaaatcttcagggaatggccaagtgacaaaggggttttagtcttt
cagttgaagaggaggccaccagactatatcccaaagaaaactaagaaacatgtcgatggg
aagctggtgaagggcaaggagagagcggaggggtcgggctacggctctgcgcttccgccc
gagaagctgccctatctagtagagctaagcccagatggctcagattccagagataagccc
aagctttaccgccttcagttgagtgtcactgaggttgggacagaaaagttcgatgagaac
tccatccagctgtttggatcaggaattcagccccatcactgtgacctcacaaacatggat
ggagttgtcactgtcacgccgagaagcatggaggctgagacttacgtggagggactgcgc
atctcagagacaaccatgctgcagagtgggatgaaagtgcagtttgggacgtcacacgtg
ttcaagtttgtggacccgagccaggaccacgctctggcaaagagatctgtggatgcaggc
ctgaccgccaagggtcccagacacaagcctggaattgttcaagagacaacttttgattta
ggaggagatgttcatagtggaacagcgttaccaacaagcaagagcaccacgaggctggac
agcgacagggtgctgcccgcctccagcacggcggagcgcgggatggtgaagccagtgatc
agaggagaatggcagcaggactaccgcaggcaagaaaacagaactcaggatgctcctggg
cctgaactgatattgcctgcaagcattgaattcagggaaagttctgaagattcattttta
tctgccattatcaattatactaatagctctacagtccattttaagttgtcacctacatat
gtattatatatggcatgtcggtatgtattgtcctgccagtacagaccggatgtcagtcct
accgagcgtactcacaaagtgattgcaatagtcaacaggatggtgagcatgatggagggg
gtgatccaggaagtagaccaggttgatcagaaacagaagaatattgcaggggcacttgcc
ttctggatggccaatgcatctgagctgctcaacttcattaaacaggaccgagatcttagt
cgaatcacattggatgcccaagacgttttagcacacttggttcaaatggcgtttaaatac
ctggttcattgtcttcaatcagaactgaataattatatgccagcctttctggatgaccct
gaagagaacagcctacaaagaccaaaaatagatgacgttctgcacacgctcacgggagcc
atgtctttgctgcgacgctgccgagtcaacgctgccctgaccatccagctcttctcccag
ctcttccacttcgtcaacatgtggctcttcaacagactggtgaccgatcccgagtcgggg
ctgtgctctcactactggggggcgattatccgccagcagctgggacacgtggaagcgtgg
gcagagaagcagggcttagagctggcagctgattgtcacctcagccggatagtgcaggca
accactttgcttacaatggataaatatgcacctgatgacattccaaatataaacagtacc
tgctttaagttaaattcactgcaacttcaagccttattacagaattaccactgtgcaccc
gatgagccttttatccccacggacctgatcgaaaacgtggtggccgtggctgaaaacacg
gctgatgagttggcgcgcagtgacgggagggaggtgcagctcgaagaggaccccgatctg
cagctgccttttcttttgccagaagacggctactcttgcgatgttgtcaggaacattcca
aatggtttacaagagtttttagaccctttgtgccagagaggattttgcaggttaattcct
catgcacgctcaccaggtacttggacaatatattttgagggtgcagattacgagagccat
cttctgcgtgagaacacggagctggctcagcctctgaggaaagaacctgaaataatcact
gtgactcttaaaaagcaaaatgggatgggcctcagcatcgttgcagcaaagggtgctggc
caagataaacttggaatctatgtcaagtctgttgtaaaaggaggtgctgctgatggggat
ggacgcctggctgcaggagaccagctcctcagtgtggacggacgaagtctggtaggactc
tctcaagaaagggcggcagaactcatgacaagaacaagttctgtggtaacactagaagtg
gcaaagcagggagcaatttatcacggcctcgccaccctgctcaatcagccgtccccaatg
atgcaaagaatttcagatcgtcgtggctcaggtaaaccccgaccaaagagtgaaggtttt
gagctctacaataattcagctccaaacgggtcacctgagagccctcagctgccttgggca
gaatacagcgaacctaagaaattgccaggtgacgacagactgatgaagaaccgggctgat
caccgctccagccccaacgtggcaaatcagcctcctagccctggagggaagagtgcatat
gcccccggaacaacagctaagataacgtctgtctccaccgggaacctctgcactgaggaa
cagacccctccaccgagacctgaggcctaccccatccccactcagacgtacaccagagag
tatttcaccttcccagcttccaaatcccaggaccggatggctcctcctcagaaccagtgg
ccaaattacgaggagaagccacacatgcacgcagacagtaatcattccagtattgcaatt
cagcgtgttacccgttcccaagaggaacttcgggaggataaagcttaccaggtagagcgg
catcggatcgaggcagtcttggatcacaagtctgatagtgatatgtggatccatcagagc
tcctctgtgggctccagcacctccagccaagagcacctggaccactcctccaagtcaggc
acccccgcgtccactctgaccaaaagcggccctgggcgctggaagacgccagccgccgtg
cagcccgtgacggtggccgtctcccagcctgtgcagacagacctgcccccgccacccccg
ccgccccccacgcactacgctggagacttcgacggaatgcccatggacttgcctctccct
ccgcctcctgccggccagaccggacctgcatctgctcaggcagcggctgcagagcggagg
aagcgggaggagcaccagcggtggtatgagaaggagaaggcccgtctagaagaggagcga
gacaggaagcgcagggagcaggagcggaagctgggccagatgcgctcccagtccctgaac
ccggccccgttttctcctgtgaccgtcccacacgtgaagccagaaaagccttctacgctc
cagaggccccaagagacggtcattcgggagctgcagccccagcagcagccccgcacgatc
gagcgcagagacctgcagtacattacagtcagccaagaggagctgtcgtccggagacagt
ctgtccccagacccatggaagcgggatgcccgggagaagctggagaagcaacagcagatg
cacattgtggatatgttgagcagggagatccaagagctccagaacaagcctgagcgcagt
gcagaggagaacgaccgtctgcggaaactcatgctggaatggcagttccagaagagactc
caggagtccaaacagaaggacgaggatgacgaggaagaggaggacgatgacgtggatacc
atgctgatcatgcagcgcctcgaggctgagcggagagcaaggttacaggatgaggagcgg
aggcgtcagcagcagctggaggagatgcgcaggcgggaagcagaagaccgcgccaggcag
gaagaggagcggcgccgccaggacgaggagagagcgaagcgagatgctgaagaaaagagg
cgacaggaagaagggtattacagccgcctggaagccgagaggcgcagacagcacgcagag
gccgagcgcaggttgctggaaccggaggagccgggtctgtgcagacccccgcttccgcgg
ggctacgagctcccgtccccgtcccctccggccgccgctcctcctcccccacctcagcgg
accgcctcctccctccaggcccagaccctgtccccagactctctgtacaccgccaggctc
gtctcgtaccacgagggggaggaggaggaggaggactgcagtctggcaggaccaaactct
tacatgggatcggctgggacagctgttggtgcccatgatgcttatcgggatccgagagag
agaccgtctaaaagccacgatgccgatgtgcctggaagttcaggagcccctgaaaacttg
acattcaaagagcgtcagcgtctgttttcacaaggtcaagatgtgtccaacaaagtaaaa
gcctctcgtaaattaacagaactggaaaatgagctgaacaccaaatga
DBGET
integrated database retrieval system
