Mirounga leonina (Southern elephant seal): 118002027
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Entry
118002027 CDS
T07472
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha isoform X1
KO
K04842
voltage-gated sodium channel type X alpha
Organism
mlx
Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mlx04040
]
118002027 (SCN10A)
Ion channels [BR:
mlx04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
118002027 (SCN10A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
Na_trans_cytopl
GPHH
CcmD_alt
IQ
Motif
Other DBs
NCBI-GeneID:
118002027
NCBI-ProteinID:
XP_034848145
LinkDB
All DBs
Position
Unknown
AA seq
1959 aa
AA seq
DB search
MELTFGSLETTNFRRFTPESLVEIEKRIAVKRAAKKPKDKHREQKDQEEKPRPQLDLKAC
NQLPKFYGELPAELVGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWLFSPFNLIR
RTAIKVSVHSYPLWFSLFITVTILVNCVGMTQTELPERIEYVFTVIYTFEALIKILARGF
CLNEFAYLRDPWNWLDFSVITLAYIGETTDLRGISGLRTFRVLRALKTVSVIPGLKVIVG
ALIHSVRKLADVTILTVFCLSVFALVGLQLFKGNLKNKCVKNCATLNETGNYSSYGKPDF
YYNKPGTSDPLLCGNGSDAGHCPQGYICLKTSDNPDFNYTSFDSFAWAFLSLFRLMTQDS
WERLYQQTLRASGKMYMVFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATIDEIEAKEKK
FQEALEMLRKEQEVLAALGIDTASLPSHNGSPLASKNASERKHRMKPRVSEGSTDDNKSP
QSDPYNQRRMSFLGLTSGRRRASHGSVFHFRAPCLDTSIPDGVTDDGVFPGDHESHRGSM
LLGGGAAQQGPLLRSPVPQPSNPGPGRKEDRHSTLSTGELAPGGIEVSAFDAGQKKTFLS
AEYLNEPFRAQRAMSVVSIMTSVLEEFEESERRCPPCLTSLAQKYLIWECCPTWVKLKTL
LFGIVTDPFAELTITLCIVVNTLFMAMEHHGMSTTFEAMLHIGNIVFTVFFTAEMVFKII
AFDPYYYFQKRWNIFDSIIVTVSLIELGAAKKGSLSVLRTFRLLRVFKLAKSWPTLNTLI
KIIGNSVGALGNLTIILAIIVFVFALVGKQLLGDNYRDNRHNISAPNEEWPRWHMHDFFH
SFLIVFRILCGEWIENMWACMEVGQKSICLILFLTVMVLGNLVVLNLFIALLLNSFSADN
LAAPDEDGEVNNLQVALARIQAFGHRTRKAICSFFTRPCLLPWPKTEPQLVVKLPLSSSK
AENHIAAHAAVGSPGGLPVSRGPRDDHNDFITNPNIWVCVPIAEGESDLDDLEEDGEEDA
RSSQQEVIPQGQQEQLQQVGRCEGHLAPRSPGSGMSSQALASHAGEKWKDNAAAQAPAEG
GDETSSSEGSTVDCLDPEEILRKIPELADDLEEPDDCFTEGCLRHCPCCKVDASKFPWAM
AWQVRKACYRIVEHSWFESFIIFMILLSSGSLAFEDHHLDQKPTVKALLEYTDRVFTFIF
VFEMLLKWVAYGFKNYFTNAWCWLDFLIVNISLTSLIAKILQYSDVASIKALRTLRALRP
LRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNFFAGKFGRCINKTNEH
LSLVPLSIVNNISDCKDQNHTGSFFWVNVKVNFDNVAMGYLALLQVATFKGWMDIMYAAV
DARDVNLQPKWEDNVYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDIFMTE
EQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQAFDIVIMVLICLNMITMMVET
DEQSEEKTKILNKINQFFVAVFTGECVMKMFALRHYYFTNGWNVFDFIVVVLSIGSLIFS
AILTSLENYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLV
MFIYSIFGMASFPHVSWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPY
CDPNLPNSNGSRGNCGNPAVGILFFTTYIIISFLIVVNMYIAVILENFNVATQESSEPLS
EDDFDMFYETWEKFDPEATQFITFSALSDFADTLSGPLRIPKPNRNTLIQMDLPLVPGDK
IHCLDILFAFTKNVLGESGELDSLKANIEEKFMATNVSKTSYEPIATTLRWKQEDISATV
IQKAYRSYVLHRSMTISNPPGVPRAEEEAVSPPGETFAVFMAEENCTLPDKSVTASTTSF
PPSYDSVTRGLSDQVNMSTSSSMQNEDEATNKKAIAPGP
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atggaactcacctttgggtccctggaaactaccaacttccgtcgattcactccagagtcc
ctggtggagattgaaaagcgaattgctgtgaagcgggcagcaaagaaacccaaagataag
cacagggagcagaaggaccaagaagagaagcctcggcctcagctagacttgaaagcttgc
aaccagctgcccaagttctatggtgaactcccggcagagctggttggggagcccctggag
gatctggaccccttctacagcacacaccggacatttatggtgctgaacaaagggaggaca
atttcccggtttagtgccactcgggccctgtggttattcagtcctttcaacctgatcaga
agaacagccatcaaagtgtctgtccactcatatcctttgtggttcagtttatttattaca
gtcactattttggtcaattgtgtgggcatgacccaaactgagcttccagaaagaatcgag
tatgtcttcactgtcatttacacctttgaagccttgataaagatactggcaagaggattt
tgtctaaatgagtttgcttacctgcgagatccttggaactggctggattttagtgtcatt
accctggcatacattggtgaaacgacagatctccgaggaatctcaggcctgcggacattc
agagttcttagagctttaaagacagtttctgtgatcccaggactgaaggtcattgtggga
gctctgatccactcggtgaggaaactggcagatgtgaccatcctcactgtcttctgcttg
agtgtctttgccctggtgggtctacagctcttcaagggcaatctcaagaacaaatgtgtc
aagaattgtgcaactctcaacgaaacgggcaattactcctcttatggaaaaccagatttc
tactataataagccaggtacttcagatcccttactgtgtggcaatggatctgatgcaggc
cactgccctcaaggttatatctgtcttaaaacatctgacaacccagattttaactacacc
agctttgattcctttgcttgggctttcctgtcactgttccgcctcatgacacaggattcc
tgggaacgcctctaccagcagaccctgagggcttctgggaaaatgtatatggtctttttc
gtgcttgtcatcttcttggggtctttctacctggtcaacttgatcttggctgtggtcacc
atggcatatgaggagcagaaccaggcaacaattgatgaaattgaagccaaggagaagaag
ttccaagaggcccttgagatgctccggaaggagcaagaggtgctggcagcgctggggatt
gacacagcctctctcccttcccacaatggatcacctttagcctccaaaaatgccagtgag
agaaagcacagaatgaaaccaagggtgtcagaaggctccacagacgacaacaaatcaccc
caatctgatccttacaaccaacgcagaatgtctttcctaggcctcacctctgggagacgc
cgggctagccatggcagtgtgttccatttccgtgccccttgcctggatacctcaatccct
gatggagtcacagatgatggagtctttcctggagaccatgagagccatcggggctccatg
ctcctgggtggaggtgctgcccagcaaggccccctccttaggagtccagtgcctcaaccc
tccaaccctggtccaggacgtaaagaagacagacactccacgttgtccaccggtgagctt
gcccctgggggcatcgaagtctcggcatttgatgcaggacagaagaagactttcctatca
gcagaatacttgaatgaacctttccgagcccaaagggcaatgagtgttgtcagcatcatg
acctctgtcctcgaggaattcgaggagtctgaacggaggtgcccaccctgcttgaccagc
ttggctcagaagtatctgatctgggagtgctgccccacgtgggtgaagctcaagacgctt
ctctttgggattgtgacggacccttttgcagagctcaccatcaccttgtgcattgtggtg
aatacactcttcatggccatggagcaccacggcatgagcaccacctttgaagccatgctc
cacataggcaacattgtctttactgtgttttttactgctgaaatggtcttcaaaatcatt
gccttcgacccctactattacttccagaagagatggaacatctttgacagcatcattgtc
actgtgagcctgatagagctgggtgcggccaagaaggggagcctgtcagtgctgcggaca
ttccgcttgctgcgggtcttcaagctggccaagtcctggccaaccttaaatacactcatc
aagatcatcgggaactcggtgggggcactggggaacctcaccatcatcctggccatcatt
gtctttgtcttcgctctggtgggcaagcagctacttggggataattaccgggacaaccgg
cataatatctctgcacccaatgaagaatggccgcgatggcacatgcatgacttcttccac
tccttcctcatcgtcttccggatcctgtgtggagagtggatcgagaacatgtgggcctgc
atggaagttggccagaaatccatatgcctcatccttttcttgacagtgatggtgctaggg
aacctggtggtgctcaacctattcattgccctgctgctgaactccttcagcgctgacaac
cttgcagctccagatgaagatggggaggtgaacaacctgcaggttgccctggcacggatc
caggcttttggccatcgtaccaggaaggccatttgcagcttcttcaccaggccttgtctg
ctgccctggcccaagacagaaccccagctggtggtgaagctcccactctccagctccaaa
gctgagaaccacattgctgctcatgcagctgtggggagccctggaggtcttccagtgtcc
agaggccccagggacgaccacaacgacttcatcaccaatcctaacatatgggtctgtgtg
cccattgctgaaggcgaatctgacctcgatgacctggaggaggatggtgaagaggatgct
cggagctcccagcaggaagtgatccctcaagggcagcaggagcagctgcagcaagtcggg
aggtgtgagggccacctggcacccaggagcccaggctctggaatgtcctctcaggccctg
gcttcccacgcgggtgagaagtggaaagacaatgctgctgcccaggcccctgcagaggga
ggggatgagacaagctcctcagaaggcagcacagtggactgcctggatcccgaggagatc
ctgaggaagatccctgagctggcagatgaccttgaagaaccagatgactgcttcacagaa
ggctgtcttcgccactgtccctgctgtaaagtggatgccagcaagtttccgtgggccatg
gcctggcaggtgcgcaaggcctgctaccgcatcgtggagcacagctggtttgagagcttc
atcatcttcatgatcctgctcagcagtgggtctctggcctttgaagaccatcaccttgac
cagaagcccacagtgaaggccttgctggaatatactgacagggtgtttacatttatcttt
gtattcgagatgcttctcaaatgggtggcctatggcttcaaaaattacttcaccaatgcc
tggtgctggctggacttcctcattgtgaacatctccctgacaagccttatagcgaaaatc
ctgcagtattctgatgtggcatccatcaaagcccttcggaccctccgtgccctgaggccc
ctgcgggctctgtctcgatttgaaggcatgcgggtggtggtagatgccctggtgggtgcc
atcccatccatcatgaatgtcctcctcgtctgcctcatcttctggctcatcttcagcatc
atgggtgtgaacttctttgcggggaagtttgggcggtgcatcaacaaaaccaatgaacac
ctttctcttgtgcctttgtctattgtgaataacatatctgactgtaaagatcagaaccac
actggcagcttcttctgggtcaacgtgaaagtcaactttgataatgttgcaatgggttac
ctagcacttctgcaggtggcaacctttaaaggctggatggacatcatgtatgcagctgtt
gatgcccgagatgtgaacttgcagcccaagtgggaggacaatgtgtacatgtacttgtac
ttcgtcatcttcatcatttttggcggcttcttcacactcaatcttttcgttggggtcata
attgacaacttcaatcaacagaaaaaaaagttagggggacaggacatcttcatgacagag
gagcaaaagaagtactacaatgccatgaagaagctgggctccaagaagccccagaagcct
atcccacggcccctgaacaagtaccagggctttgtctttgacattgtgaccagacaagct
ttcgacattgtcatcatggtcctcatctgcctcaacatgatcaccatgatggtggagact
gatgagcagagtgaagaaaagacaaaaatccttaacaaaatcaatcagttctttgtggct
gtcttcacgggcgagtgtgtcatgaagatgttcgccttgcggcattactacttcaccaac
ggctggaatgtgtttgacttcattgtcgtggtcctctccattgggagcctgatattttct
gcgattcttacgtcacttgaaaattacttctccccaacactcttccgagtcatccgcctg
gcccgaattggtcgcatcctcaggctgatacgagcagccaagggaatccgcacattgctc
tttgccctcatgatgtccctgcctgccctcttcaacatagggctgctgctcttccttgtc
atgttcatctactccatcttcggcatggccagcttcccccatgtaagttgggaggctggc
atcgatgacatgttcaacttccagacctttgccaacagcatgctgtgcctcttccagatt
accacatcagctggctgggatggcctcctcagtcctatcctcaacacaggacccccttac
tgtgaccccaatctgcccaacagcaatggctcccgggggaactgtgggaacccagctgtg
ggcatcctcttcttcacaacatacattatcatctccttcctcatcgtggtcaacatgtac
attgcagtgattctggagaacttcaatgtagccacgcaggagagcagtgaacctttgagt
gaggatgactttgacatgttctatgagacctgggagaagtttgacccagaagccacacag
tttattaccttttctgccctctcagactttgcagacaccctttcaggccccctgcgaatc
ccaaaacccaatcggaatacattaatccagatggacctacccttggtccctggagataag
attcactgtttggacattctttttgccttcactaagaatgttctgggagaatctggggag
ttggattctctgaaggcaaatattgaagagaagtttatggcaactaatgtttcaaaaaca
tcctatgaaccaatagcaaccaccctccggtggaagcaggaagacatttcagctactgtc
attcaaaaggcctatcggagctatgtgttacaccgttccatgacaatctccaacccccca
ggtgtgcccagggctgaggaggaggctgtgtcacccccaggtgaaacctttgctgtattc
atggcagaagaaaattgcacactcccagacaaatctgtaactgcatctaccacgtctttc
ccaccatcctatgacagtgtcactagaggccttagtgatcaagtcaacatgagcacatct
agctcaatgcagaatgaagatgaagctaccaataaaaaagcaattgcccctgggccatag
DBGET
integrated database retrieval system
