Mirounga leonina (Southern elephant seal): 118002045
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Entry
118002045 CDS
T07472
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
mlx
Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mlx04040
]
118002045 (SCN11A)
Ion channels [BR:
mlx04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
118002045 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
118002045
NCBI-ProteinID:
XP_034848169
LinkDB
All DBs
Position
Unknown
AA seq
1773 aa
AA seq
DB search
MKMDDRCYPVIFPDERNFRPFTSDTLATIEKRIAIQKEKKKCKDQTAAEPQPRPQLDLKV
SRKLPKLYGDIPHELIARPLEDLDPFYKNHKTFMVLNKKRTIYRFSAKRALFIFGPFNPI
RSLAIKISVHSVFSMFIICTVIINCVFMATAYGKENSNIDTDNAEYVFTGIYIFEALIKI
LARGFILDEFSFLRDPWNWLDSVVIVTAFATYIPEARESIFSLSSLRTFRVFRALKAISV
VSGLKVIVGALLRSVKKLVDVMILTLFCLSIFALVGQQLFMGSLNQRCLHNDCRNIDNPD
DNCFEKKNSSEFRMCGIWMGNSACSENFQCTHTKRNPDYNYTNFDNFGWSFLAMFRLMTQ
DSWEKLYQQTLRASGLYSVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNRNVAAETEAKE
KMFQEAQRLLKEEKEALVAMGIDRSSLNSLEASSFSPKKRKLFGKRKRKSFFLRDSGKDQ
PPGSDSDEDSTKKPHILEQTKRLSQNLSVDYFDEHRDPFQRQRALSAVSILTITVQEQEK
SQEPCLPCGGNLASKYLVWNCSPQWVCIKKALRTVMTDPFTELAITICIIINTIFLAMDH
YNMRRSFDSMLHIGNLVFAGIFMAEMCLKIIALDPYNYFRRGWNIFDSIVALLSFADVMN
STVAGKKKSLLFFRPLRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFS
VVGMQVFGSKFNSIKSNKTSCGPTAPCLRRWHMGDFYHSFLVVFRILCGEWIENMWECMQ
ETNQALCIVVFLSIMVIGKLVVLNLFIALLLNSFSNEERDGNLDGESKKTKVQLALDRFC
RAFCFVIHTLQHFCHKWCRSQNLPRQKEVTGGPAAKSKDIIPLVTEVKKVPEMREQHDRT
WLAPLAEEEDGFESPGENNAQRVTQPEAGKQAFELHQVTKKSISPGAQSVEIDVFPEDDI
CLSEKDPQKKCDTTSVLSECSTVDPQNPFGWVPEMIPKKEPERCFPKGLGHCFPCCAMDK
RKSPWIIWWNLRKTCYQIVKHSLFESFIIFVILLSSGALVFEDVHLEKRPNIQALLNCTD
HIFTYIFILEMGLKWVAFGFGKYFTSVWCWLDFIIVIVSVTSLIDLKSLKSFRTLRALRP
LRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNFFSGNFGRCINRTDIN
SVINYSTVASKTECEGGNLTWVTLPVNFDNVGMAYLALLQVATFKGWMDIMYAAVDSRGK
DLQPGFEEKPENYLFFVVFIIFGSFFTLNLFIGVIIDNFNQQQKKISDEDIFMTEEQKKY
YNAMKKLGSKKPQKPIPRPLNKCQGLVFDLVTSQVFDIIIIILIFLNMVSMMAESDDQSE
ATKLILERLNLAFVVIFTIECLTKIFALRQYYFTIGWNLFDCVIVVLSIVSTMVSALENQ
QHIPFPPTLFRVVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYA
IFGMSCFCKVKEEHGIDDIFNFKTFVGSILCLFQITTSAGWDALLKPMLQSKDSCNPNLD
SRHLPAIAITYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLGEDDFEIFYEVWEK
FDPEATQFIKYSALSDFADALPEPLRVAKPNKFQFLVMDLPMVSGDRLHCLDILFAFTTR
VLGDSGGLDSMKMMMEEKFMEANPSKKLYEPIVTTTKRKEEERCAAVIQKAFRKYRLKMS
TCALEDRPRSPLHTLCNGDLSSSGVAEGKVHYD
NT seq
5322 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggatgacaggtgctacccagtgatctttccagatgagcggaatttccgtccc
ttcacttctgacactctggctacaattgagaagaggattgccatccaaaaggagaaaaag
aagtgcaaagaccagacagcagcagaaccccagcctcgacctcagcttgacctaaaggtc
tccaggaagttgcctaaactctatggtgacattccccatgagctgatagcaaggcccctg
gaagacttggacccattctacaaaaatcataagacatttatggtgttgaacaaaaagaga
acaatctaccgcttcagtgccaagcgtgccttgttcatttttgggcctttcaatccaatc
cgaagtttagccatcaaaatctcggtccattcagtgttcagcatgttcatcatctgcact
gtcatcatcaactgcgtgttcatggccactgcctacgggaaggaaaacagcaatatagat
accgacaatgctgagtatgtcttcactgggatttatatttttgaagctttgataaaaata
ttggcaagaggttttattctggatgagttttcttttcttcgagatccatggaactggctg
gactccgttgtcattgtaacagcgtttgcaacatacataccagaagccagggaaagcatc
ttcagtctgtcatccctgcgtaccttccgagtgttcagagctttgaaagcaatttcagtg
gtttcaggtctgaaggtcattgttggggccttgctgcgctctgtgaagaagcttgttgac
gtgatgatcctgactctcttttgcctcagcatcttcgccctggtaggtcagcagctcttc
atgggaagtctgaaccagagatgtctccataatgactgtaggaatatcgataaccctgat
gacaattgctttgaaaagaaaaattcctctgaattcagaatgtgtggcatctggatgggt
aacagtgcctgttctgaaaattttcaatgcacacacaccaaaaggaatcctgactataat
tataccaattttgacaactttggctggtcttttcttgccatgtttcggcttatgacccaa
gattcctgggagaagctttatcaacagaccttgcgtgcctcagggctctactcagttttc
ttctttgtggtggtcatcttcctgggctctttctacctgattaacttaaccctggctgtt
gtcaccatggcttatgaggaacagaacagaaatgtagctgctgagacagaggccaaggag
aagatgttccaggaagcccagcggctgctgaaggaggagaaggaggctctggttgccatg
ggaattgacagaagttcacttaattcccttgaagcatcatctttttccccaaagaagaga
aagctttttggtaaaaggaaaagaaagtccttttttttgagagactctgggaaagaccag
cctccaggatcagattctgatgaagattccacaaaaaagccacacatcctagagcaaacc
aaacgactatcccagaatctgtcagtggattacttcgatgagcacagggaccccttccaa
agacagagggccctgagcgcggtcagcatcctcaccatcaccgtgcaggaacaagaaaaa
tcacaggagccttgcctgccatgtgggggaaacctggcatccaaatacctcgtgtggaac
tgtagcccccagtgggtgtgcattaagaaggccctgagaaccgtgatgactgacccattt
actgagctggccatcaccatctgtatcatcatcaacactatcttcttggccatggatcat
tacaacatgcgccggagttttgattctatgttgcatatagggaatttggtttttgctggc
attttcatggcagaaatgtgcctaaaaattattgcgcttgatccctacaactactttcgc
cgaggctggaacatttttgacagcattgttgctcttctgagttttgcagatgtgatgaac
agtacagttgcagggaaaaaaaaaagcctgctgtttttccgtcccttaagagtgctgaga
gtcttcaagttagccaaatcctggccaactttaaacacactgataaaaataattggccac
tccgttggagccctgggaaacctgaccgtggtcctggctattgtggtctttattttctca
gtggttggcatgcaggtctttggctctaaattcaattctataaagagcaataaaacatcc
tgtggccctacagccccatgtttacgacggtggcacatgggggatttctaccattccttt
ctggtggtattccgcatcctctgtggggaatggattgaaaacatgtgggaatgtatgcaa
gaaacaaatcaagcactgtgcattgtcgtctttctgtcgatcatggtgataggaaaactt
gtggtactcaacctcttcattgccttgctgctcaattccttcagcaatgaggagagagat
ggaaacttggatggagagtccaaaaaaaccaaagtccagttagccttggatcggttctgc
cgggctttttgctttgtaatacatactcttcagcatttttgtcacaagtggtgcaggagt
caaaacttaccaaggcaaaaagaggtgacaggaggccctgctgccaaaagcaaagacatc
attccactggtcacagaggtgaaaaaggtcccagagatgagggagcagcatgaccggact
tggttggccccacttgcagaggaagaggatggttttgaatctcctggtgaaaataatgca
cagcgtgtcacacaacctgaggctggaaaacaggcctttgaactccatcaggtgaccaag
aagtccataagcccaggagctcaaagtgtggaaattgatgtgttccctgaagatgacata
tgtttgtcagaaaaggatccccaaaagaagtgtgatactaccagtgtgctctcagaatgt
agcaccgtcgatccacagaatccctttgggtgggtgcctgagatgattcccaaaaaagaa
ccagagagatgttttcccaaaggcctgggtcactgcttcccatgctgtgccatggacaag
agaaagtccccctggatcatttggtggaacctgcgaaaaacttgctaccaaatagtgaaa
cacagcttgtttgagagctttattatctttgtgattctgctgagcagtggggcactggta
tttgaagatgttcaccttgagaaacgacccaatatccaagcattacttaattgtactgac
catattttcacatacatttttatcctggagatgggtctaaaatgggtggcctttggattt
gggaagtatttcaccagtgtctggtgctggcttgatttcatcattgtgattgtctctgtg
accagtctcattgacttaaagagcttgaagtccttccggaccctaagagccctgaggccc
ctgcgagcattgtctcagttcgaaggaatgaaggtggtagtcaatgctctcataggtgcc
atacctgccattctgaatgttttgcttgtctgcctcattttctggttgatattttgtatc
ctgggagtaaacttcttctctggaaattttggaagatgcattaatagaacagatataaac
tcagttataaattacagcactgttgcaagcaaaactgaatgtgaaggtggaaatttaact
tgggtcacccttccagtcaactttgacaatgtgggaatggcttaccttgccctgctgcaa
gtggcaacatttaagggctggatggatattatgtatgcagctgtcgattccagagggaaa
gatctacagccagggtttgaggagaaaccagaaaactaccttttcttcgtggtttttatc
atctttggttcattctttacgctgaatctttttattggtgttattattgacaacttcaac
caacagcagaaaaagataagtgatgaagacatttttatgacagaagaacagaagaaatac
tataatgcaatgaaaaaattaggatccaaaaaacctcaaaagcccattccaagacctctg
aataaatgccaaggtctcgtgtttgacctagtcacaagccaggtctttgacatcatcatc
atcatcctcattttcctcaacatggttagcatgatggctgaatcagatgaccagtctgaa
gccacgaaactcatccttgagcgtctcaacctggcctttgtggtcatctttacaattgag
tgtctcaccaaaatctttgctttgaggcaatactacttcaccattggctggaatttattt
gactgtgtgattgtggttctttctatcgttagtacaatggtttctgccttggagaaccag
cagcacattcccttccctccaacactcttcagggttgtccgcttggctcggattggtcgg
atcctgagacttgttcgggcagcacgaggaattaggactctccttttcgctctgatgatg
tctcttccctctctattcaacatcggtcttctactttttctggttatgtttatttatgcc
atttttggtatgagctgtttttgcaaagtgaaagaggagcatggaattgatgacatattc
aacttcaaaacttttgtcggcagcatactctgtctcttccagatcaccacctcagcaggc
tgggatgccctcctcaagcccatgctgcaatcaaaggattcatgcaaccccaacttagac
agccgtcacctccctgccatagccatcacctacttcgtcagttacatcatcatctccttt
ctcattgttgtcaacatgtacattgctgtgattttagagaattttaacacagccactgaa
gaaagtgaggaccctttgggtgaagatgactttgagatattctatgaagtctgggaaaag
tttgacccagaagcaacacagttcatcaaatattctgccctttctgactttgctgatgcc
cttcctgagcctttgcgtgtggcaaagcccaataaatttcaatttctcgtgatggacttg
cccatggtgagtggagatcgtctccactgcctggatattctcttcgcattcaccactagg
gtactcggtgactccggtggcctggacagcatgaaaatgatgatggaggagaagttcatg
gaagccaacccttccaagaagttatatgaacccatagtcaccaccaccaagaggaaggaa
gaggaaagatgtgctgctgttattcaaaaggcttttcgaaaatacaggctgaagatgtcc
acatgtgccttggaagacaggccccgttcaccactccacacactctgcaatggagacctg
tccagctctggggtggccgagggcaaagtccactacgactga
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