Mirounga leonina (Southern elephant seal): 118002671
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Entry
118002671 CDS
T07472
Symbol
PSMC6
Name
(RefSeq) 26S proteasome regulatory subunit 10B isoform X1
KO
K03064
26S proteasome regulatory subunit T4
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03050
Proteasome
mlx05010
Alzheimer disease
mlx05012
Parkinson disease
mlx05014
Amyotrophic lateral sclerosis
mlx05016
Huntington disease
mlx05017
Spinocerebellar ataxia
mlx05020
Prion disease
mlx05022
Pathways of neurodegeneration - multiple diseases
mlx05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
118002671 (PSMC6)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
118002671 (PSMC6)
09164 Neurodegenerative disease
05010 Alzheimer disease
118002671 (PSMC6)
05012 Parkinson disease
118002671 (PSMC6)
05014 Amyotrophic lateral sclerosis
118002671 (PSMC6)
05016 Huntington disease
118002671 (PSMC6)
05017 Spinocerebellar ataxia
118002671 (PSMC6)
05020 Prion disease
118002671 (PSMC6)
05022 Pathways of neurodegeneration - multiple diseases
118002671 (PSMC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mlx03051
]
118002671 (PSMC6)
Proteasome [BR:
mlx03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
118002671 (PSMC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_2
AAA_5
AAA_22
RuvB_N
PRS7_OB
nSTAND3
Prot_ATP_ID_OB_N
AAA_14
DUF815
AAA_7
TPR_MLP1_2
TIP49
RNA_helicase
AAA_33
AAA_3
AAA_18
AAA_11
Mg_chelatase
NPHP3_N
bpMoxR
AAA_28
AAA_lid_PRS2_C
TsaE
DUF5906
NACHT
AAA_24
AAA_25
ATPase
Parvo_NS1
AAA_17
IstB_IS21
ATPase_2
DUF4140
Motif
Other DBs
NCBI-GeneID:
118002671
NCBI-ProteinID:
XP_034849229
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MAIPGIPYERRLLIMADPRDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSEND
LKALQSVGQVGNGVWGIRSDGNLFFSYWQKVMPFFPPQIVGEVLKQLTEEKFIVKATNGP
RYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGG
LSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLK
VVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL
MELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHA
GPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADS
KKLESKLDYKPV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggccattcccggcatcccctatgagcgacggcttctcatcatggcggaccctagagat
aaggcgcttcaggactaccgcaagaaactgctggagcacaaggagatcgacggccgtctc
aaggagttaagggaacaattaaaagaacttaccaagcagtatgaaaagtctgaaaatgat
ctgaaggccctacagagtgttggacaggtaggtaatggagtttggggtataaggagtgat
ggcaatttgttttttagttattggcaaaaagtaatgccttttttccccccccagattgtg
ggtgaagtacttaagcaactaactgaagaaaaattcattgttaaagctacaaatggacca
agatatgttgtgggttgtcgtcgacagcttgataaaagtaagctgaagccaggaacaaga
gttgctttggatatgactacactaactatcatgagatatttgccacgagaggtggatcca
ttggtctacaacatgtctcatgaggaccctgggaatgtttcttattctgagattggggga
ctatcagaacagattcgggaattaagagaggtgatagaattacctcttacaaacccagaa
ttattccagcgtgtaggaataatacctccaaaaggctgtttgttatatggaccaccaggc
acaggaaaaacactcttggcacgagctgttgctagccagctggactgcaatttcttaaag
gttgtatctagttctattgtagacaagtacattggtgaaagtgctcgtttgatcagagaa
atgtttaattatgccagggatcatcaaccatgcattatttttatggatgaaatagatgct
attggtggtcgtcggttttctgagggtacttcagctgatagagagatacagagaactttg
atggagttactgaatcaaatggatggatttgatactctacatagagttaaaatgatcatg
gctacaaacagaccagatacactggatcctgctttgcttcgtccaggaagattagataga
aaaatacatattgatttaccaaacgaacaagcaagattagatatattgaaaatccatgca
ggtccgattacaaagcatggtgaaatagattatgaagcaattgtgaagctttcagatggc
tttaatggagcagacctgagaaatgtttgtactgaagcaggtatgtttgcaattcgtgct
gatcatgattttgtagtacaggaagacttcatgaaagcagtcagaaaagtggctgattct
aagaagctagagtctaagttggactacaaacctgtgtaa
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integrated database retrieval system
