Mirounga leonina (Southern elephant seal): 118002963
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Entry
118002963 CDS
T07472
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
118002963 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlx03400
]
118002963 (APEX1)
Enzymes [BR:
mlx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
118002963 (APEX1)
DNA repair and recombination proteins [BR:
mlx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
118002963 (APEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
118002963
NCBI-ProteinID:
XP_034849489
LinkDB
All DBs
Position
Unknown
AA seq
317 aa
AA seq
DB search
MPKRGKKGAVAEDGEEPKIEPEAKKSKVGTKKNEKEAGEGPVLYEDPPDQKTSPNGKSAT
LKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWSA
PSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFDTFVLVTAYVPNAGRGLVR
LEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFG
ELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIR
SKALGSDHCPITLYLAL
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgtgggaaaaagggagctgtggcagaagacggggaagaacctaagattgag
ccagaagccaagaagagtaaggtgggaacaaagaaaaacgaaaaagaggcaggagagggg
ccagtcctgtatgaggaccccccagatcagaaaacctcgcccaatggtaaatcggccact
ctcaagatctgctcctggaatgtggatgggcttcgggcctggattaagaagaaaggttta
gattgggtaaaggaagaagccccagatatcctctgccttcaagagaccaaatgttcagag
aacaaactaccagctgaacttcaagagttacctggactatcccatcagtactggtcagct
ccttcagacaaggaagggtacagtggtgtgggcctgctctcccgccagtgccccctcaaa
gtctcctatggcattggtgaggaggaacatgatcaggaaggccgagtgatcgtggctgaa
tttgacacgtttgtgctagtaacagcctatgtacctaatgcaggccgaggtctggtacgc
ttggagtaccggcagcgctgggatgaagcctttcgcaagttcctgaagggtttggcttcc
cgcaagccccttgtgctgtgtggggacctcaatgtggctcatgaagaaatcgaccttcgc
aaccccaagggaaacaaaaagaatgcgggcttcactccacaagagcgtcaaggctttggg
gaattactacaggccgtgccactggctgacagcttccggcacctctaccccaacacggcc
tatgcctataccttttggacctacatgatgaatgctcgatccaaaaatgtcggttggcgc
cttgattactttttgttgtctcactctctgttacctgcattgtgtgacagcaagatccgt
tccaaggccctgggcagtgaccactgccctatcaccttatacttagcactgtga
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