Mirounga leonina (Southern elephant seal): 118003458
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Entry
118003458 CDS
T07472
Name
(RefSeq) collagen alpha-4(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04151
PI3K-Akt signaling pathway
mlx04510
Focal adhesion
mlx04512
ECM-receptor interaction
mlx04820
Cytoskeleton in muscle cells
mlx04974
Protein digestion and absorption
mlx05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
118003458
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118003458
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118003458
09142 Cell motility
04820 Cytoskeleton in muscle cells
118003458
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
118003458
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
118003458
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mlx04147
]
118003458
00536 Glycosaminoglycan binding proteins [BR:
mlx00536
]
118003458
Exosome [BR:
mlx04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118003458
Glycosaminoglycan binding proteins [BR:
mlx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118003458
Hyaluronan
Extracellular matrix or blood plasma proteins
118003458
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
VWA_CoxE
2CompARG
Motif
Other DBs
NCBI-GeneID:
118003458
NCBI-ProteinID:
XP_034850434
LinkDB
All DBs
Position
Unknown
AA seq
2310 aa
AA seq
DB search
METWKAFWEFIILAASFGFIKSQRIVCREASVGDVVFLVDANINAQHTRSMRNFLYIMVN
SFNVSKETIRVGLAQYGDMPHSEFLLSTYPRKVDVLKHILRFQFRPGGHRLGLALRFLLD
QHFQAAAGSRASQGVPQTALVIISSPAEDGAQEAAEALRRAGVRLYTVGVKDAVLAELKE
IASSPEEKFASFVPNFSDLGSLAQKLRQQLCDTLAKAVQPVDNVFPACREAVLADIVFLV
DSSTSIGPQNFQKVKNFLYSVILGLDISSDQVRVGLAQYNDNIYPAFQLNQHPLKSVVLE
KIQNLPYRTGDTNTGSALEFIRRHYLTEAAGSRAKDRVPQIVILVTDGESNDEVQEAANK
LKEDGVVVYVVGVNVQDVQELQKIASEPFEKYLFNIENFNTLQDFSGGILQTLCSAVEGK
IKEFTQAYADVVFLADTSQGTSHASFQWMQNFISRVIDLLDVGRDKYQIGLAQYGDQGHI
EFLLNTYQTRDEMIAHVRDHFLLQGGSRRTGKALRYLHQTFFQEAAGSRFLQGVPQYAVV
MTSGKSEDEVWDAAQTLREKGVKVMSVGVQDFDRRELEGMATPPLVYEMQGQDGVRQLMQ
DVAVVIQGTGQLGFGTASEKEPVVACPTAIPTDLVFLIEEFSWDRQSNFQQVVSFLKTTV
SSLNVRPDGVRIGLVFYSEEPRLEFSLDAFQNPAKILEYLDKITYRRRSGRTKTGAALDF
LRNEVFIEERGSRFKHGVQQLAVVITEGFSQDQLSKPASLLRRAGVTIYAVGTHLASESK
DLENIASYPPWKHVISLESFLQLSVVGNKIKNQLCPETVDKGVSISGMGQAPQEDCVHIE
KADIYFLVDGSSSINHDDFLEMKMFMSGAIKRFQIGPDRVRFGVVQYSDGIDIQFILNQY
SSVSGLKAAIDDIQQRKGGTMTGQALSSMAQVFVNTTRSGVPWYLIIITDGKSEDPVAEP
AEALRREGVIIYAIGIKNANVMELKEIAKDKTFFTPEFDSLKAIQQDVVQDICSSETCKN
RQADIIFLIDGSESISPKDFEKMKGFIKRMVNQADISADEIQIGLLQFSSTPQEEFRLDQ
YSSKADIHRAISNVQQIKDGTHTGKALTFTLPFFDSSRGGRPSVHQYLVVITDGVAQDDV
VVPAKSLRDRNIIIFAIGVGEAKNAQLLQITDDPQKVYYEENFESLQNLEKKLLLKVCIP
QGCDIDLSVGVDISTSARQVQQKLQGLLPEVMRPLALLSNISCSAAGGLNLMFRYLVPGS
NGQLIFDSGFKKYSDDIIQTFLIHQTATSNYMDADFLQSLGDHAIHLSSAKVKVLLVFTD
GLDDNFQRLKITSELLRSKGFSGLLFIGLEGVHKLEELQELEFGRGFIYNQPLSITLQSL
PSILLKQLDTIVERRCCNIYIKCFGEDGYQGDGGNPGSKGKLGADGLPGHPGEEGGHGER
GPQGLPGPRGEEGCPGVRGPKGARGFSGEKGSPGDEGVDGLVGEQGNRGAPGSSGEKGNR
GNWGLTGPPGPPGEHGEPGLRGDPGDPGADSYIQGPKGEKGRRGHWGRSSFDGPQGEPGN
VGPQGSRGRRGVPGLKGMRGESGERGYHGELGYPGSQGLRGRQGPPGNSGQRGLPGAEGV
PGPPGPIGSKGKAGPTGMKGEVGDAGATGPQGPQGLRGQPGLLGPDGYGYLGRKGKKGEP
GFPGSPGAQGEDGDGGHQGEKGAKGIRGRRGNAGFPGLIGTPGDQGPPGPVGIKGLKGLA
DMTPCEIIAIIQENCPCSTGISKCPAFPSEVVFALDMSNDVSQSDFERMRNILLSLLMRM
EISESNCPTGARVAVVSYNAKTDYLIRFSDHKGKPALLQAVRTIALQGSSGSRNLGEAMR
FVARHVFKRVRSGLLARKVAVFFQAGWAHDTDAFSTATLELSALDITSAIITFTEEHNLP
DVLLTDGTNRFHLFVWETESQQDVEHMVHCTLCYDKCRPDPECERSAPGPLAGDMDVVFV
VDSSYGIGADVYRTALSLVDAMLDDLEVAAQPSVSLHGARAALVMYTTPGFWPGAGRPPV
LEGFHLTSYGQKIQMRRYLREASGRPLQGAPALGHALEWTLEKVLLAAPLPRQVRVLFAI
VASETSSWDQEKLRTLSLEAKCKGITLFVLALGPGVGTHELAELEGVASLPTEQHLLRLE
GISGQEVAYAQGFTRAFLNLLKSGVNQYPSPELIGKCGGPNRGDTLLQPFRLVRRLPKLQ
FGQSGFAGDLEALGGTDILLEENRKATVKSVTWQEALENYEKNGHGAEGNGQERPARRKQ
TGKERNSGTAYGPCSMDPMAGKCQDYTLKW
NT seq
6933 nt
NT seq
+upstream
nt +downstream
nt
atggagacttggaaggcgttttgggagttcatcattcttgcagctagttttggcttcatc
aagtcacagagaattgtctgcagggaagcgtctgtgggagatgtcgtgtttctagtggac
gccaacatcaacgcccaacatacccgcagcatgcggaacttcttgtacatcatggtaaac
agcttcaatgtcagcaaagagaccatccgcgtggggctggctcagtacggcgacatgccc
cattccgaattcctactttccacctacccccgcaaagtcgatgtgttgaaacacattctg
aggtttcagtttcggcctgggggccacaggttgggcctggccctgcggttccttctagat
cagcacttccaggcagcagcagggagtcgggcaagccagggcgtgcctcagacggccctg
gtgatcatcagcagcccagctgaggacggtgcgcaggaagccgccgaggccctcaggagg
gcgggcgtccggctttataccgttggtgtcaaagatgcagtgttggccgagctcaaggag
attgcgagcagtcctgaggagaagttcgcctcttttgttcccaacttctctgatctgggc
agtcttgctcagaagctgcggcaacagctctgtgacactttggcaaaggcagttcagcct
gttgacaacgtctttccagcttgcagagaggcagtcttagcagacattgtcttcctagta
gacagctcaaccagcatcggaccccagaacttccaaaaagtgaagaacttcctttactct
gtcatcttggggcttgacatcagcagtgaccaggtccgagtgggacttgctcagtataat
gacaacatctacccagcctttcagctgaaccagcaccctctgaagagtgtggtcctggag
aagatccagaatcttccctaccgtacaggagacacaaacacagggagtgccctggagttt
atcaggaggcactacttgactgaggcagctggcagccgggccaaggacagggttcctcag
atagttatcctggtgacagatggggagtcaaatgatgaagttcaggaggcagctaacaag
ttaaaagaagatggagtggttgtttatgtggtaggggtcaatgtccaagatgtccaggaa
ttgcaaaaaatagccagtgagccatttgagaagtatctcttcaacatcgaaaacttcaac
acccttcaggatttctcaggaggcattcttcagactctgtgctcagcagtggagggtaag
ataaaagaattcacccaagcttatgcagatgtggtctttcttgccgacacctcacagggc
acatcacatgccagtttccagtggatgcagaatttcatctccagagtgattgacctgctg
gatgttggcagggacaagtaccagattgggctggctcagtatggtgatcaaggccacatc
gaatttttgctcaatacctaccagacccgggatgagatgattgcccatgtccgtgaccac
tttttgctccagggtggctccaggaggacgggcaaagctctgcgatatcttcatcagact
ttcttccaggaggcagcaggaagccggtttctccagggtgttccgcaatatgcagtggtc
atgacctcaggcaaatctgaggatgaggtctgggatgccgcacagactttgagggaaaaa
ggtgtgaaagtcatgtctgtgggtgtacaggactttgacaggagagaactggaggggatg
gcaaccccaccccttgtatatgagatgcaaggacaagatggagtcagacagttgatgcag
gatgtggctgtggtgatccaagggaccgggcagctcgggttcgggactgcgtctgagaag
gagcctgtagtagcatgtccgacggctatcccaactgatttggtctttctcattgaggaa
ttcagctgggacaggcaatcaaatttccaacaggtcgtcagcttcttaaagaccactgtc
agctctctaaacgttcgtccagatggtgtgagaattggcttggtcttttacagtgaggaa
ccacgactggagttttccctggatgcatttcagaacccagccaaaatcttagagtatttg
gacaaaataacctaccggagaagaagtggaaggaccaagactggagctgctttggatttc
ctaaggaacgaagttttcattgaggagaggggcagccggttcaaacatggtgtgcagcag
ctggccgtggtcatcacggaaggcttctctcaggaccagttgtccaagccagcttccctc
ctccgcagggcaggggttaccatctatgcggtgggcacccaccttgcctcagagagtaag
gacctggagaatatagcatcatatcctccttggaagcatgtcatctcgctggaatccttt
ctgcaactctctgttgtgggaaacaagattaagaaccaactctgccctgagactgtggac
aaaggtgtttccatttctgggatgggccaggctccacaagaagactgtgtgcacattgag
aaggccgatatttacttccttgtcgatgggtctagcagcatcaaccatgatgattttctc
gaaatgaagatgttcatgagtggggcgataaagaggttccaaattgggcctgacagagta
cggtttggagtcgttcagtactcagatggaattgatattcaatttatcctcaaccagtat
tccagtgtgtcaggactgaaggcagccattgatgacatccagcagaggaaaggtggcacc
atgaccggtcaggccttgagcagcatggctcaggtctttgtgaacaccacccgcagcggt
gtgccttggtatctcataatcatcactgatggtaaatctgaagacccggtggctgagcct
gcagaggcattgaggagagaaggagtcatcatttatgctattggaataaaaaatgctaat
gttatggagctcaaggagatagctaaagataagacgtttttcacgcctgagtttgattcc
ttgaaggccatccaacaagatgtggtccaggacatctgctcctcagagacctgtaagaat
aggcaagctgatattatcttcctgatagatggttcggaatccatctccccaaaagacttt
gaaaagatgaagggattcatcaagcggatggtgaaccaagctgatattagtgctgatgaa
attcagattggccttttgcagttcagctcaactcctcaggaagaattcaggcttgaccaa
tactcctcaaaggcggacatccacagagccatctcaaatgttcagcagatcaaggatggc
acccacactgggaaagccctgactttcactctgcctttttttgacagttcaagaggaggg
agacccagtgttcatcagtatttggttgtgatcactgatggggttgcccaggatgacgtg
gtcgtgccagccaagtctctcagggacaggaacatcattatttttgccattggggtggga
gaagccaaaaatgctcagcttttgcagattactgatgacccgcagaaagtgtactatgaa
gagaattttgagtccctgcagaacttggagaagaaacttcttcttaaggtttgcattccg
caaggatgcgacatagatttgtctgtaggagttgatatttccacttccgcaaggcaagtt
cagcagaaacttcaagggttactgccggaggtgatgcgaccgttggccttgctttccaac
atcagctgtagtgctgctggtggcctcaacctgatgttccgctacttggtccctggctca
aatggccagcttatctttgactcaggctttaaaaagtatagcgatgatattattcagaca
ttcttaattcatcagactgccacgagcaactatatggatgcggattttttgcagtccctg
ggagatcacgctatccatctgtcttctgctaaagtgaaggtccttttagtgtttacagac
ggactggatgataatttccagagactgaagataacatctgagcttctccgcagcaaagga
ttctctgggctcctctttattggcctggaaggtgtgcataaattagaagagctccaggag
ctagaatttggcagaggattcatatataatcaacctctgagcatcacactgcaatccctc
ccaagcatcttactgaagcaacttgacacaattgtggaaagaagatgctgcaatatatat
ataaagtgttttggagaagatgggtaccagggtgatggtggaaaccctgggagcaaggga
aagctgggtgctgatgggttacctggtcatcctggtgaagaaggtggacatggagaaaga
ggcccccagggccttcctggaccccgaggtgaggaaggatgcccaggtgtgagaggacct
aagggagcaagaggattttcaggagagaagggaagccctggtgatgaaggtgttgacggc
ttggttggggaacagggtaatcgtggagccccggggtcatctggagaaaaaggaaatagg
ggaaattggggcttgacaggaccacctggacctcctggagagcacggagagcctgggtta
aggggagaccctggagatcctggagcagatagttacatccaaggccctaagggagaaaaa
ggaaggcgtggacattggggacgttctagttttgatggacctcagggggaacctggaaat
gttggccctcaggggtcaagaggaagacgaggtgtgccagggctgaagggtatgcgtgga
gaatccggtgaacggggttaccacggagagcttggatacccaggctcacagggactgaga
ggaaggcaaggaccaccaggaaattctggacaaagaggcttaccgggtgctgagggggtt
cctgggcctccagggccaattggttccaaaggaaaagctggaccaacaggaatgaagggg
gaagttggtgatgcaggagccacaggcccgcagggtccacaaggactaagagggcaacct
ggccttttaggtccagatggatatggatatctgggaagaaaaggaaaaaagggtgaacct
ggatttcctggctctcctggtgcacaaggagaagatggtgatgggggccaccaaggagag
aagggggcaaagggaatcagaggaaggaggggtaatgctggctttcctggacttattgga
actccaggtgaccaaggccctccaggaccagtgggcatcaaggggctcaaaggcttggca
gatatgacgccttgtgaaatcattgctatcatacaagagaactgcccttgttcaacaggt
atttccaaatgcccagcgttccctagcgaagtggtctttgccttggacatgtccaatgac
gtctcccagtcggattttgagaggatgagaaacattctattatctctgttgatgaggatg
gaaataagtgagagtaactgcccaacgggcgccagagtggccgtcgtttcgtacaacgcc
aaaacagactacctgattcgcttctcagaccacaaggggaagcccgcgctcctgcaggcg
gtcaggacaatcgcgctgcaaggctcgtcgggcagcaggaaccttggggaggccatgagg
tttgtcgcaagacatgtattcaaacgtgtgcgctcaggccttctcgcgaggaaagtggct
gtgttcttccaggcgggctgggctcacgatacggatgccttcagcactgccactctggag
ctcagtgccctggacatcacctctgcgatcatcaccttcacagaggagcacaacctcccg
gatgtcctgctgacggatggaaccaacagatttcacctgtttgtctgggagaccgagagt
cagcaggacgtggagcacatggtccactgcactctctgctatgacaagtgcagaccagac
ccagagtgtgagcggagcgcgccaggacccctggcaggggacatggacgtggtatttgtg
gtggacagctcctatggcattggtgctgatgtgtaccgcactgccctgagtctagtggat
gccatgctcgacgacctggaggtggccgcgcagcctagcgtgtccctccatggggcgcgt
gctgccctggtgatgtacacaactccaggcttctggcccggtgcagggcgcccccctgtg
ctggagggcttccacctgacctcctacggccaaaagatacagatgcggaggtacctccgt
gaggcttctggccgccctctgcagggagctcccgccctgggacacgccctggagtggact
ctggagaaggtgctcctggcagcccctctgcccaggcaggtgcgggtcctcttcgccatc
gtggccagtgagaccagcagctgggaccaggagaagctaaggactctgtccctggaggcc
aagtgcaagggcatcactctgtttgtgctggccttgggcccaggtgtgggtacccatgag
ctggctgagctggagggtgtggccagcctccccaccgagcagcacctgctacgtctggag
ggaatctcaggccaggaagtagcctatgcccagggattcacgagggccttcctgaacctt
ctaaaaagtggagtaaaccagtacccatcccccgagctcattggaaaatgtgggggcccg
aaccgaggggacactctgctgcagccatttaggcttgtcaggaggttgcccaagctccaa
tttggccaatctggctttgcgggtgatctggaagcacttggagggacagacattttgcta
gaggagaatagaaaagccacagtgaaatctgtaacttggcaagaagcacttgaaaattat
gaaaagaatggacatggtgctgaaggaaatggacaagaaaggcctgcaagacgaaaacaa
actggaaaagaaagaaattcaggcactgcctatggtccttgttccatggatccaatggca
ggaaagtgccaggattacaccctgaaatggtaa
DBGET
integrated database retrieval system
