Mirounga leonina (Southern elephant seal): 118003477
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Entry
118003477 CDS
T07472
Symbol
COL6A6
Name
(RefSeq) collagen alpha-6(VI) chain
KO
K06238
collagen type VI alpha
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04151
PI3K-Akt signaling pathway
mlx04510
Focal adhesion
mlx04512
ECM-receptor interaction
mlx04820
Cytoskeleton in muscle cells
mlx04974
Protein digestion and absorption
mlx05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
118003477 (COL6A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118003477 (COL6A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118003477 (COL6A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118003477 (COL6A6)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
118003477 (COL6A6)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
118003477 (COL6A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mlx04147
]
118003477 (COL6A6)
00536 Glycosaminoglycan binding proteins [BR:
mlx00536
]
118003477 (COL6A6)
Exosome [BR:
mlx04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118003477 (COL6A6)
Glycosaminoglycan binding proteins [BR:
mlx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118003477 (COL6A6)
Hyaluronan
Extracellular matrix or blood plasma proteins
118003477 (COL6A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
vWA_SIBA-E
Integrin_beta
Motif
Other DBs
NCBI-GeneID:
118003477
NCBI-ProteinID:
XP_034850446
LinkDB
All DBs
Position
Unknown
AA seq
2272 aa
AA seq
DB search
MKMLLILFLIIICSHVSLNKDPGPEYADVVFLVDSSDHLGTKSFPLVKAFINKMISSLPI
AAHKYRVALGQYSDQLHSEFQLSTFKSRNPMLNHLKKNFSFTGGSLRIGNALREAHGTYF
SAPASRRDRKQFPPILVVLASAESEDDVEEASKALREDGVRIVSVGLQDASEEELKAMAT
AQFHIKLRSVRDLGAFSQNMTQIIKDATQYRDGAADDILVEVCQGPSVADVVFLLDVSVN
GSQENFEYLKEFLEESVSALDIKENCMRVGLVTYSNETKVINSLSRGLNKSEVLQNIQNL
SPRAGKAYTGAAIRKIRKEVFSARNGSRKNQGVPQIAVLVTHRPSEDNVTKAAVNLRREG
VTIFTMGVEGASESQLEKIASHPSEQHVSKLKTFSDLAAHNQTFLKKLRNQITHTVSVFS
ERTETLKSGCVDTEEADIYLLIDGSGSTQATDFHEMKTFLSEVVGMFNIAPQKVRVGAVQ
YADSWDLEFEINKYTNKHDLGKAIENIRQMGGNTNTGAALNFTLGLLQKAKKQRGNRVPC
HLVVLTNGMSKDSILEPSNRLREELIRVYAIGVKEANQTQLREIAGKEKRVYYVHDFDAL
KDIRNQVVQEICAEEACKEMKADIVFLVDSSGSIGLENFIKMKTFMKNLVSKSQIGADRV
QIGVVQFSDINKEEFQLNRYMSQNDISDAIDRMMHIGETTLTGSALTFVSQYFSPAKGAR
PNVRKFLILITDGEAQDIVKDPAVALRQEGIIIYSVGVFGSNVTQLEEISGRPEMVFYVE
NFDILQHIEDDLVFGICSPREECKRIEVLDVVFVIDSSGSIDHDEYSIMKDFMVDLVKKA
DVGKNQVRFGALKYADDPEVLFYLGDLGTKWEVISVLQKDQPMGGNTYTAEALGFSDHMF
TEAGGSRLHKGVPQVLIVITDGESHDADKLNATAKALRDKGILVLAVGIAGANPVELLAM
AGSSDKYFFVETFGGLKGIFSDVSASVCNSSKVDCEIEKVDLVFLMDGSNSIHPDDFKKM
KEFLASVVQDFDVSVNRVRIGAAQFSHTYRPEFPLGTFIGKEEISFQIGNIQQIFGYTHI
GAALRHVGHYFQPDMGSRINAGTPQVLLVLTDGQSQDEVAQAAEDLRHKGIDIYSVGIGD
VDDQQLIQITGTADKKLTVHNFDELTKVKKRIVRNICTSGGESNCFVDIVVGFDISTHEK
GQTLLEGQSWIETYLQDLLRTISSLNGVSCEVGTETQVSVAFQVTNAMKKYSPKFEIYSE
NILNSLKDVTVKGPSLLNANLLSSLWDAFQNKSAARGKVVLLFSDGLDDDIEKLEQKSDE
LRKEGLNAFITVALDGATDSSDLADLLYIEFGKGFEYRIQLTIGMRDLGSRLSKQLVNVA
ERTCCCLFCKCIGGDGIMGDPGPPGKKGFPGFKGSEGYLGEEGVAGDRGTNGPVGEQGTK
GCHGAKGPKGNRGLNGQEGELGGSGIGGLNGEQGESGLPGEKGEKGDEGSQGSPGKRGVS
GDQGAKGQRGDPGVPGFDNTIEGPKGLKGERGRQGGRGWPGPPGTPGSRRKTAAHGRRGH
TGPQGKTGIPGPDGLEGSWGLKGPQGPRGETGMKGEKGGLGSKGPQGPPGPGGEAGSPGH
LGSQGNKGEPGDLGEKGAIGLLGPRGLPGGDGNPGYGSIGSKGAKGQEGFPGESGPKGEI
GDPGGPGETGPKGARGKTISTGPPGEMGSPGEPGLPGRKGVKGARGLASFSMCELIQYVR
DHSPGGHGKPECPVHPTELVFALDQSRDVTKQEFERMKELLSSLVRGVRVRENSCPVGAR
IAILTYTSHARHLIRFSDAYKKNQLLREIEAIPYERSSESREIGKVMRFIARNVFKRTLP
GAHARRIATFFSSGQSADAQTITTATMEFSALDIIPVVIAFSNVPSIKRAFAIDDTGTFQ
LIMVPSGTDYTPALERLQRCTFCYDVCKPDAFCDQAKPPPAQSYMDAAFLLDSSRHVGSA
EFEDIRHFLGALLDHFEISPEPETSVTGDRVALLSHAPPNFLPNTQKSPVRTEFNLTTYN
SKRLMKRHLEESVQQLNGDTFIGHALQWTLDNIFLNTPNMRRNKVIFVISTGETSHLDRE
TLKKESLRAKCQGYTLFVFSLGPAWNDKELEDLASYPLDHHLVQLGRIHKPDHRYSVKFV
KSFVNSIRRAINKYPPINFKMKCNRLSSTDLKQPPRQWRSFVPGPYKTTFKEDALQKAKF
FQDKKYLSRVARDSRDDTIQNLTRNSFHTFKNGKKVIKPAPKQHDKGSALRI
NT seq
6819 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgctgctgattttgttcctcataataatttgttcccatgtctctctgaacaaa
gatcccggccctgagtatgcagatgtcgtgtttctggtggacagctctgatcacctggga
actaagtccttcccacttgtgaaagcattcatcaacaaaatgatcagcagtctgcccata
gcggcccacaagtaccgcgtggccctgggccagtacagtgaccagctccacagtgagttc
cagctgagcaccttcaagagcaggaaccccatgctgaaccacctcaagaagaacttcagc
ttcactggcggctccctgaggatcggcaacgctctccgggaggcacatgggacctacttc
tctgcaccggccagcaggagggacaggaagcagtttcccccgattctggtggtcctggct
tccgcggagtctgaggatgacgtggaagaggcctccaaggccctgcgggaagacggggtg
aggatcgtctctgtggggctgcaggatgcttctgaggaggagctgaaggccatggccacc
gctcagttccatatcaagctccggtcggtcagggaccttggcgcgttttcccaaaacatg
acacagatcatcaaggacgccacccagtacagggatggagcagccgatgatattcttgta
gaagtttgccaaggcccgtctgtggctgatgtggtgttcctgctggatgtgtctgtcaat
ggcagccaggagaactttgaatatcttaaggaattcctggaagagagtgtatctgctctt
gacataaaggaaaactgcatgagggttggcctcgtgacctacagcaatgagacgaaggtg
ataaattcactcagcaggggcttaaataagtcagaggttctccagaatatacagaacctc
tctccccgggctgggaaggcttacacaggagctgccatcagaaagatcaggaaggaagtg
ttcagtgcacgcaatggcagtcggaagaatcagggggtgccccagattgccgtgctggtg
acccacagaccctcagaggataatgtgaccaaggcagccgtgaacctccggcgcgagggc
gtgaccattttcaccatgggcgtcgagggggccagcgagagccagctagaaaagatcgcc
tctcacccctccgagcagcacgtgtccaaactgaaaaccttctccgacctggccgctcac
aaccagacgtttctgaagaagctgcggaaccagataacgcacacggtctctgttttttca
gagcgcactgaaactctcaaatccggttgtgtggatactgaagaagcagacatttatctg
ctcattgatggctctggaagcacccaggccacagacttccacgaaatgaagaccttcctg
tcagaggtggtagggatgttcaacatcgctccccaaaaggtgcgggttggggctgtccag
tatgctgacagctgggacttggaatttgagatcaataaatacactaacaagcacgacttg
ggaaaggccatcgagaacatccggcagatgggtgggaacacaaacacaggggcagccctg
aatttcacactagggctcttacaaaaagcgaagaagcagcgaggaaaccgagtgccttgt
catcttgttgtcctgacgaatggcatgtccaaggatagcatcttggagccttcgaacaga
ctgagagaagagctcattcgtgtttatgccattggggtcaaggaggccaaccaaacacag
ctgcgagaaattgcaggcaaggagaagagggtatactacgtgcatgactttgatgctttg
aaagacataagaaaccaagttgttcaagaaatctgtgctgaagaagcctgcaaagagatg
aaagcggacatcgtgtttctggtggacagttctggcagtataggacttgaaaatttcatc
aaaatgaaaacatttatgaaaaacctggtgagcaaatctcagattggggcagatcgagta
caaatcggtgtagtccagttcagtgacatcaataaggaggaatttcagctcaacagatat
atgtcccaaaatgacatttcagatgcaatagaccggatgatgcacattggagaaaccacc
ttgactggtagtgccctgacctttgtgtctcagtacttcagccctgccaagggggcccgg
cccaatgtcagaaagtttctcatccttatcactgacggtgaagctcaggacatagtcaag
gacccagcagtagcacttcgacaagaaggcataattatctactctgtgggggtgtttggt
tccaatgtcacccagcttgaggaaatcagcgggaggccagagatggttttttatgttgag
aattttgatatcctgcagcacattgaagatgatcttgtttttggaatatgcagcccccgt
gaagaatgcaagaggatagaagttttggatgttgtgtttgtaattgacagctctggaagc
attgaccatgatgaatatagtatcatgaaagactttatggttgacttggtgaaaaaagct
gatgttggcaagaatcaggtccggtttggggctctgaagtatgctgatgacccagaggtg
ctgttttatctgggtgaccttggcacaaaatgggaggtgatttcggtgctccagaaggac
cagcccatggggggcaatacttacaccgccgaggccttaggcttctcagaccacatgttc
actgaagccgggggcagccgtctgcacaaaggggtcccccaagtcctcattgtgatcacc
gatggggaatcccacgatgctgataagctcaatgccacagccaaggccttgagggacaaa
ggcattcttgtcctggccgtggggattgctggtgctaatcccgtggagctgctagccatg
gcaggatcgagtgacaaatacttctttgtggagacgtttggaggcctgaagggaatattt
tcagatgtgtcagccagcgtatgtaactcttcaaaagtagattgtgaaattgaaaaagta
gatcttgttttcctcatggatggttcaaatagcattcatccagatgacttcaagaagatg
aaggaattcctggcatctgttgttcaagactttgatgtcagtgtcaacagagtacgtata
ggtgctgctcagtttagccatacctatcggccagaatttccactgggtactttcataggc
aaagaggagatatcatttcagattggaaacatccagcagatctttggatacacacacatt
ggcgctgcactccggcacgtggggcattacttccagccagacatgggcagccgcataaat
gcaggtaccccgcaggtgttgctggtcctcacagatggccagtcccaagatgaggtggcc
caggctgctgaagacctgagacacaaaggtattgacatttactctgtgggcattggggac
gtggatgatcagcagctcattcagatcaccgggactgcagataagaagctaacggttcat
aactttgatgaactgacaaaggtcaaaaaaaggatagttcgcaacatctgtacctcgggg
ggtgagagcaattgttttgtggacattgtggtgggatttgacatctcaactcatgaaaaa
gggcagactttgcttgaaggtcagtcttggatagaaacctaccttcaagacctcttacgt
accatcagctccctcaatggggtaagctgtgaggtgggcacagagactcaagttagcgtg
gcttttcaagtgaccaatgccatgaaaaaatattcacccaagtttgagatctatagtgaa
aacatactgaacagcttgaaggatgtaacagttaaaggaccatctcttctcaacgcaaac
cttttgagttctctatgggatgcatttcagaataaatcagctgctcgaggaaaggtggtt
ctcttattttcagatggattggatgatgacatcgaaaagcttgaacaaaaatctgatgaa
cttagaaaagaaggcctgaatgccttcataactgttgctctggatggagccaccgattca
agtgacctggctgatcttctctacattgaattcgggaaagggtttgagtacaggatccag
ctcactattggaatgagggaccttgggagccgactgtcaaagcaactggttaatgttgct
gaaaggacgtgctgctgtttattctgcaagtgcattggaggggatggcataatgggggat
cctggaccaccggggaaaaagggattcccaggttttaaaggcagtgagggctatctggga
gaggaaggtgttgctggagacagaggaaccaatggaccagtgggagagcaaggtactaag
ggatgccatggtgccaaaggtcctaagggaaacaggggactaaatggacaggagggagaa
cttggaggaagtggaattggcggattaaatggagaacagggtgagagtggtcttcccgga
gaaaaaggagaaaagggtgatgaaggatcccagggaagcccaggaaagcgaggggtttct
ggtgaccaaggtgcaaagggccagcgaggagaccctggagttcctggatttgacaatacc
atcgaaggacctaagggcttgaaaggagaacgtggaagacaaggtggaagaggctggcca
ggcccccctggaacaccaggctccagaagaaagacagcagctcatggccgaagaggacat
acaggcccacaggggaaaacaggcatcccaggcccagatggacttgaaggctcatgggga
cttaagggccctcagggtcccagaggagagactggtatgaaaggcgagaaaggaggtctg
ggaagtaaaggtcctcaggggcctccaggaccaggaggagaagcagggagtccaggccat
ttgggaagccaaggaaataaaggagaacctggagatttgggagaaaaaggagctattggc
ctcctgggtcctcgaggcttgccgggtggtgatggcaacccaggttatggtagcattgga
agtaaaggagcaaaggggcaagaaggatttcctggagaaagtggacctaagggtgagatt
ggggaccctgggggtccaggagaaactggacccaagggagctagaggcaagacgatatcc
actgggcctccaggagagatgggatcccctggggagccaggacttcctggacgcaagggt
gtgaaaggggccagaggattggcttcattttctatgtgtgagctcattcagtatgtacgg
gaccatagccctggcggacatggaaaaccagaatgccccgtgcatcccaccgaattggtg
tttgccttggaccagtctcgagatgtcaccaagcaggaatttgagcgcatgaaggagctg
ctgtcttccctggtgaggggcgtcagggtccgggagaacagctgcccggtgggcgcacgc
atcgctatcctcacctatacctctcacgcccggcacctcatccgcttctcagacgcctac
aagaagaaccagctcctcagggagattgaagctattccttacgagaggtcctcggaaagc
agggagatcggcaaagtgatgaggtttatcgccagaaatgtcttcaagcgaacgcttcca
ggggctcacgcaagaagaatcgccaccttcttcagcagcggtcagtcggccgatgcccag
accattaccactgcaactatggaattcagtgcccttgacatcattccggtcgtgatcgca
ttcagcaacgtgccctccatcaagcgtgcatttgcgattgatgacactggcacattccaa
ctcataatggttccatccgggaccgactacacgccagcattagagagactccagcggtgt
actttctgctatgatgtatgcaagccagacgctttttgcgatcaagccaaaccaccccct
gcacagtcttacatggatgctgctttccttctggacagctcccggcatgtgggaagtgct
gaatttgaagacataagacactttttgggagcactgttagatcactttgagatcagccca
gagcctgagacctctgtcactggagaccgggtggccctattaagccatgctccccccaac
ttcctacccaacactcagaagagtcctgttagaactgagttcaaccttaccacctacaat
agtaaacgcctcatgaagaggcacctggaagaatcagttcaacaactaaatggagacact
ttcattggtcatgccttacagtggaccctggacaatatctttttaaatacacccaatatg
agaagaaacaaagtcatatttgtaatatccactggggaaaccagtcacttggacagggaa
accttaaagaaagaatccttgagagccaaatgtcaaggttataccctatttgtgttttcc
cttggccctgcttggaatgacaaggaactagaagatctagccagctaccctttggatcac
cacttggtccagcttggccgaattcataaacctgaccacagatacagtgtgaagtttgtg
aaatcctttgtaaactcaatcaggcgtgcaatcaacaaatatccacccataaacttcaaa
atgaagtgcaatagactgagctctacagatctgaagcagcccccacggcagtggcgaagt
tttgttcctggaccatataaaactaccttcaaagaagatgcattacagaaggcaaagttc
tttcaagataaaaagtacctttcaagagtagcaagagacagcagagatgatactattcaa
aatcttaccagaaactcattccatacctttaaaaatggaaaaaaggtgataaaacctgct
ccaaaacaacatgataaaggaagtgctttaagaatttag
DBGET
integrated database retrieval system
