Mirounga leonina (Southern elephant seal): 118003631
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Entry
118003631 CDS
T07472
Symbol
CHD8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118003631 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mlx03036
]
118003631 (CHD8)
Chromosome and associated proteins [BR:
mlx03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118003631 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_Hrp3
MUN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
118003631
NCBI-ProteinID:
XP_034850583
LinkDB
All DBs
Position
Unknown
AA seq
2589 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTDDSFNQVTQDPIEEALGLPSSLDSLDQMNQDGGGGDVGN
SSASDLVPPPDETAPTELPKESTAPAPESLTLHDYTTQPVSQEQPAQPVLQTPTPTSGLL
QVSKSQEILSQGNPFMGVSATAVSSSSAGGQPPQSAPKIVILKAPPSSSVTGAHVAQIQA
QGITSTAQPLLAGTANGGKVTFTKVLTGTPLRPGVSIVSGNTVLAAKVPGNQATVQRIVQ
PSRPVKQLVLQPVKGSAPAGNPGATGPPLKPAVTLTSTPTQGESKRITLVLQQPQSGGPQ
GHRHVVLGSLPGKIVLQGNQLAALTQAKNAQGQPAKVVTIQLQVQQPQQKIQIVPQPPAS
QPPPPPPSTQPVTLSSVQQAQIMGPGQSPGQRLSVPLKVVLQPQAGSSQGASSGLSVVKV
LSASEVAALSSPASSAPHTGGKIGMEENRRLEHQKKQEKANRIVAEAIARARARGEQNIP
RVLNEDELPSVRPEEEGEKKRRKKSSGERLKEEKPKKSKTSGTSKTKGKSKLNTITPVVG
KKRKRNTSSDNSDVEVMPAQSPREDEESSIQKRRSNRQVKRKKYTEDLDIKITDDEEEEE
VDVTGPIKTEPILPEPVQEPDGETLPSMQFFVENPSEEDAAIVDKVLSMRIVKKELPSGQ
YTEAEEFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNP
DYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSR
HPELKRVTRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLG
KTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQQ
YEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLL
DSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKL
QAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNM
PNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKL
LPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSD
RFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRN
SYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDE
GSKFCEEDIDQILLRRTTTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKKA
DLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFSDLESEDDERPRSRRHDRHHTY
GRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAILVYCLLHYRGDENIK
GFIWDLISPAENGKTKELQNHSVFNVSPFPGLSIPVPRGRKGKKVKSQSTFDIHKADWIR
KYNPDTLFQDESYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLGGAIASEIDIWFP
VVDQLEVPTTWWDSEADKSLLIGVFKHGYEKYNTMRADPALCFLEKAGRPDDKAIAAEHR
VLDNFSDIVEGVDFDKDCEDPEYKPLQGPPKDQDDEGDPLMMMDEEISVIDGDEAQVTQQ
PGHLFWPPGSALTARLRRLVTAYQRSYKREQMKIEAAERGDRRRRRCEAAFKLKEIARRE
KQQRWTRREQTDFYRVVSTFGVEYDPDTMQFHWDRFRTFARLDKKTDESLTKYFHGFVAM
CRQVCRLPPAAGDEPPDPNLFIEPITEERASRTLYRIELLRRLREQVLCHPLLEDRLALC
QPPGPELPKWWEPVRHDGELLRGAARHGVSQTDCNIMQDPDFSFLAARMNYMQNHQAGAP
APSLSRCSTPLLHQQYTSRTASPLPLRPDAPVEKPPEETAAQVPSLESLTLKLEHEVVAR
SRPTPQDYEMRVAPSDTTPLVSRNVPPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSSSS
STDESEDEKEEKLTADRSRSKLYDEESLLSLTMSQDGFPNEDGEQMTPELLLLQERQRAS
EWPKDRVLINRIDLVCQAVLSGKWPSSRRSQEMVTGILGPGNHLLDSPSLTPGEYGDSPV
PTPRSSSAASMAEEEVSAVTTAAAQFTKLRRGMDEKEFTVQIKDEEGLKLTFQKHKLMAN
GVMGDGHPLFHKKKGNRKKLVELEVECMEEPNHLDVDLETRIPVINKVDGTLLVGEDAPR
RAELEMWLQGHPEFAVDPRFLAYMEDRRKQKWQRCKKNNKAELNCLGMEPVQTANSRNGK
KGHHAETVFNRVLPGPITPDSSKKRARRMRPDLSKMMALMQGGGTGSLSLHNTFQHSSSG
LQSVSSLGHSSATSASLPFMPFVMGGAASSPHVDSSTMLHHHHHHPHPHHHHHHHPGLRA
PGYPSSPATTTSGTALRLPPLQPEEDEDDEDEDDDDDLSQGYDSSERDFSLIDDPMMPAN
SDSSEDADD
NT seq
7770 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggatctgtttgatgacccaaatttatttggcctggactctctg
actgatgacagcttcaaccaggtcacacaagaccccattgaggaagcccttggactgcca
agctctctggactccttggatcagatgaaccaggatggtggaggtggtgatgtggggaat
tcatcagcaagtgacctggtccccccaccagacgagacagcccccacagaacttcccaaa
gaatcaacagctccagctccagaatctttaactttgcatgattataccactcagcccgtc
agccaggagcagcccgcccaacctgtcttacagacaccgacgccaacatcaggacttttg
caggtctccaagagccaggagatcctgagccaagggaatcctttcatgggtgtctctgcc
acagctgtttcctccagtagtgctggagggcaaccacctcagtcagcccctaagattgtt
atccttaaggccccaccaagctcctcagtcactggtgcccatgtggcacaaattcaggcc
caaggtatcaccagcacagctcagcccctgctggctggcacagccaatggtggaaaagtt
acttttaccaaagtgctaaccggcactccccttcgaccaggtgtttccattgtctctggt
aatacagtgttggccgccaaggtccctgggaaccaggctactgttcagcgcattgtccag
cccagccgaccagtaaagcagctggtcctacagccagttaagggttcagctcctgctgga
aaccctggggccacagggcccccactgaagcctgcagttacactgacctctacacctacc
cagggtgaatcgaaacgcatcaccctggtcctccagcagccacagtctggaggtccccaa
ggacaccggcatgtcgttctagggagtctaccaggcaagatagtgttacagggcaaccag
ctggcagccctgacccaagccaagaatgctcaggggcagcccgccaaagtagtaacaatc
cagctgcaggtgcaacagccacagcagaaaatccagattgtaccacagccgccagcgtcg
cagccgccgccaccgccgccctcaacccagcctgtgactctgtcctctgtgcagcaggct
cagataatgggaccaggacaaagcccaggacagagactttcagtaccactcaaggtggtg
ctgcagccacaggctggctcttcccaaggggcttcttctgggctctccgtagttaaagtt
ctaagtgccagtgaagtggcagctctgtcttcaccagcaagctctgctcctcatactggg
ggcaagataggaatggaggaaaaccgcaggctggagcaccagaagaagcaagagaaagcc
aatcggattgtagcagaagctattgctagggcccgtgcccggggtgagcagaacatacct
cgagtcctaaatgaggatgagttgcccagtgttcggcctgaggaagaaggtgagaagaaa
cgcaggaagaagagcagtggggagaggctcaaggaagaaaagccaaagaagagcaaaaca
tctggtacctccaaaactaagggcaagagtaagctgaataccatcacccctgtggtgggt
aaaaagagaaagcgtaatacctcatccgataattcagatgtagaagtcatgcctgcccaa
tcaccccgagaagatgaagaaagcagcattcagaaaagacgctcaaaccgccaagttaaa
cgaaaaaaatataccgaggatctggatataaagatcacagatgatgaagaagaagaagaa
gtggatgtaactggtccaataaaaactgagcctatcctccctgaaccggtgcaggagcca
gatggcgagactttgccttccatgcagttctttgtggagaatcccagtgaagaagatgca
gccatagtagacaaagtgctttccatgcggattgtgaagaaggagcttccttctggacaa
tatactgaggcagaagaattctttgtcaagtacaagaactactcctatctacactgtgaa
tgggctaccatctcccaactagagaaggataaaaggatccatcaaaaactaaagcgcttc
aaaaccaaaatggctcagatgagacatttcttccatgaggatgaagaacccttcaatcca
gactatgtagaggtggataggatattggatgagtctcacagtattgacaaagacaatggg
gagcctgtaatttactacctggtgaaatggtgctctctgccctatgaggatagtacgtgg
gagctgaaagaggatgttgatgagggcaagattcgagaatttaaacggatccagtcaagg
cacccagaactcaaaagggtgactcgtccacaggcaagtgcctggaagaagttggagctg
tcacatgagtataaaaacagaaaccagttacgggaatatcagttggaaggggtcaactgg
ctgctctttaactggtataacaggcaaaactgtatcctggctgatgagatgggactgggc
aaaactatccagtccattgccttcttgcaggaggtatataatgtgggcatccatggcccc
ttcctggtcattgccccactgtccacaattactaattgggagcgagaattcaatacatgg
acagaaatgaacactattgtataccatggcagtctggccagccgtcagatgattcagcaa
tatgaaatgtactgcaaagattcacgggggcgcctcatcccaggcgcatacaagtttgat
gccctgatcaccacttttgagatgattttgtcagactgtcctgagcttcgtgaaattgaa
tggcgttgtgtcatcattgatgaggcccatcggctaaagaaccgtaattgcaagctgctt
gatagcctcaagcacatggacctggaacacaaagtgctactcacaggaacgccattgcaa
aatactgtggaggaactgttcagcttgcttcatttcttggaaccttcacagtttccttca
gaatcagagttcctcaaggattttggggatctcaagacagaggaacaggttcaaaagcta
caggccattctcaagccaatgatgctaagaagactcaaagaggatgttgaaaaaaacctg
gcacccaaacaggaaactatcattgaagtagagttgaccaacatccagaagaaatattac
cgggctattttggagaagaatttctccttcctgtccaagggggcaggtcatacgaacatg
cctaatctactcaatacgatgatggagttgcgcaaatgctgcaaccacccgtacctcatc
aatggtgcagaagaaaaaatcctaacagaatttcgagaagcttgccatattatacctcat
gacttccacttgcaggccatggttcgttcagctggcaaattggttcttattgacaagtta
cttccaaaacttaaagctggtggtcataaggttctgatcttctcccagatggtacgctgc
ctagatatcctagaggattatctaatccagaggaggtacctatatgagcgtattgatggg
cgagtcagaggtaaccttcggcaggcagctattgaccgcttcagcaagcctgactcagac
cgctttgtcttcttgctctgtacccgggctggtggacttggtattaatctcacagctgct
gatacctgcatcatttttgattcagactggaatccacaaaatgacctgcaggcccaggca
cggtgtcatcgaattgggcagagcaaagctgtgaaggtgtaccgtctcatcactcgtaat
tcttatgagagagagatgtttgataaggctagcctcaagttgggattggataaggctgtg
cttcagtccatgagtggtcgggatggcaacattaccggaatccaacagttctcaaagaag
gagattgaagatcttttacgaaaaggggcatatgcagccataatggaagaagatgatgag
ggctccaagttttgtgaagaagacattgaccagatcttgttaagacgaaccacaaccatc
accatcgagtctgaaggaaagggttcgacctttgccaaggcaagctttgttgcttctgaa
aataggactgatatttctctggatgaccccaacttttggcagaagtgggccaaaaaggct
gacctggacatggatctgcttaatagcaagaataacttggtgattgacacacctagagta
cgaaaacagactcgccacttcagcactctgaaagatgatgacctagtggaattctctgat
ttggaaagtgaagatgatgagcggccacgctctcgccgacatgaccgacatcatacctat
gggcgcactgactgctttcgggtggaaaagcacctcttggtatacggttggggacggtgg
cgagatatcttgtctcatggacgcttcaagcgacgtatgactgaacgagatgtggagaca
atttgccgggccatccttgtatactgtcttctgcactatcgtggggatgaaaatatcaaa
ggcttcatttgggacttgattagccctgctgaaaatggcaagacaaaagaattgcagaat
cattcagtcttcaatgtctcccctttcccaggtctgtctatccctgtgccccgtggacga
aaggggaaaaaagtaaagtcacaaagcacttttgatatccataaggcagattggatccgg
aaatataatcctgatactctgttccaagatgagagttataagaagcatttaaaacatcag
tgtaacaaggtgctattgcgggtacgaatgctatattatctgaggcaggaggttattgga
gaccaggcagagaaggtgttagggggtgccattgccagtgagattgacatatggttccca
gtagtggatcagctggaggttccaacaacatggtgggacagtgaggctgacaagtccctg
ctcattggagtctttaagcatggctatgagaaatataatactatgagggcagacccagcc
ttatgcttcctggaaaaggctgggcgaccagatgacaaagccattgcagcagaacatcga
gtgttggataatttctctgacatagtagaaggggttgactttgataaggattgtgaagat
cctgaatataaaccactccagggtcccccgaaggaccaagatgatgagggtgatcccttg
atgatgatggatgaggagatctcagtgattgatggagatgaagcccaggtaacccagcag
ccaggccatctcttctggcctccaggctctgctctaacagctaggcttcggcgcctagta
acagcttatcagcgcagctacaagagagaacagatgaagatagaggctgcagaacgaggg
gaccggagacggcggcgttgtgaggcagccttcaaactaaaagaaattgcgcggcgggag
aaacagcaacgatggacaaggcgtgaacaaactgatttctatcgagtggtgtctaccttt
ggtgtggagtatgaccctgataccatgcagttccattgggatcgcttccgtacttttgcc
cgactggacaaaaaaacagacgaaagccttaccaagtacttccatggctttgtggccatg
tgtcgccaagtgtgccgacttcccccagcagctggagatgagcccccggaccctaatctg
ttcattgagcccatcactgaggagagggcctcacggactctctaccgtattgaattgctt
cggcgcttacgggaacaagttttatgccatccccttctggaagatcggctggcattatgt
cagcctccaggtcctgaattgcccaaatggtgggagcctgttcggcatgatggggagctt
ctacgaggggcagcccgccatggggtgagccaaacagactgcaacatcatgcaggaccca
gacttctcttttctggctgcccgtatgaattatatgcagaaccatcaggcaggagcacca
gctccatccttgtcacgctgctctacgccactgctacaccagcagtatacctcgcgcact
gcctcaccactgcccctgcgcccagatgctcctgttgaaaagccacctgaggagacagct
gcccaggtccccagtctggagagtctgactttaaaactagagcatgaggtggtggccagg
agccgaccaaccccacaagactatgagatgcgagtagccccctctgatactacccctctg
gtttcccggaatgttccaccagtcaaactggaggatgaggatgattcagactctgaactg
gacttgagcaagctgtcaccatcatcctcttcttcctcatcctcatccagctccagctcc
agcactgatgagagtgaggacgagaaggaagaaaagctaactgctgaccggtcccgctca
aagctctatgatgaagagagtcttctgtccctcactatgtcccaagatggattcccaaat
gaagatggagaacaaatgacccctgagcttctgctgctacaagaaagacaaagagcttct
gagtggcccaaggatcgtgtccttataaaccgtattgacctcgtctgccaggctgtactc
tcagggaagtggccttctagccgccggagccaggaaatggtaacaggaattttggggcca
ggcaaccacttgctagacagtccctcattgactccaggagaatatggtgactctccagtc
cccacaccacgaagtagcagcgcagcttccatggcagaggaggaggtgtccgcagtcacc
acagcagcagctcagttcacgaaacttcgcagaggcatggatgaaaaggagtttacagtt
cagatcaaagatgaggaaggattgaagttaacattccagaagcacaagttgatggctaat
ggagtaatgggagatggacatcctctgtttcataagaagaagggaaacagaaagaagcta
gtcgagctggaggtggagtgcatggaagagcctaatcaccttgatgtggacctggagacc
cggatccctgtcatcaataaggtggatggtactttgctggtgggtgaggatgcccctcgc
cgggctgaactggagatgtggttacagggtcatccagagttcgctgtcgatccccgattt
ctagcgtatatggaggatcgcagaaaacagaagtggcagagatgtaaaaaaaataataag
gcagaattgaactgtttgggaatggaaccagtacagacggctaactctaggaatggtaaa
aagggtcaccatgctgaaactgtgttcaaccgggttttgccagggcctattacgccagac
agcagcaagaagcgggcccgtaggatgcgaccagacctttcaaagatgatggccctgatg
cagggtggaggcactgggtccctgtctctgcataataccttccaacacagcagtagtggc
ctgcagtctgtgtcatccctgggtcacagcagtgccacttctgcatctttgccttttatg
ccgtttgtgatgggtggtgcagcatcatcccctcatgtagactccagcaccatgcttcat
caccaccaccaccacccccacccccaccatcaccaccatcaccatccaggcctgagagcc
cctggctacccttcttcaccagccactaccacctctggtactgccttgaggttgccacca
ctgcaacctgaggaggatgaggacgatgaggatgaagatgatgatgatgatttatctcag
ggctatgatagctcagaaagggacttctcactcattgatgatcctatgatgccagccaac
tcagactcaagtgaagatgctgatgactga
DBGET
integrated database retrieval system
