Mirounga leonina (Southern elephant seal): 118003934
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Entry
118003934 CDS
T07472
Symbol
DCHS1
Name
(RefSeq) protocadherin-16
KO
K16507
protocadherin-16/23
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04392
Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04392 Hippo signaling pathway - multiple species
118003934 (DCHS1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mlx04515
]
118003934 (DCHS1)
Cell adhesion molecules [BR:
mlx04515
]
Cadherins
Cadherin related
118003934 (DCHS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
118003934
NCBI-ProteinID:
XP_034850944
LinkDB
All DBs
Position
Unknown
AA seq
3295 aa
AA seq
DB search
MQKEEGIAPSCTGMQSCRPLPLLPLLLLLLGAGVSGAWGQAGSLDLQIDEEQPAGTLIGD
ISAGLPPGTAAPPMYFISAQEGSGVGTDLAIDEHSGVVRTARVLDRERRDRYRFTAVTPD
GATVEVTVRVADINDHAPAFPQARAALQIPEHTALGTRYPLEPARDADAGRLGTQGYALS
GDGAGETFQLETRPGPDGAPVPELVVTGELDRENRSHYMLQLEAYDGGSPPRRAQALLDV
TLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVYASDADAGANGAVTYEINRRQSEGDG
PFSIDAHTGLLRLERPLDFEQRRVHELVVQARDGGAHPELGSAFVTVNVRDANDNQPSMT
VIFLSADGSPRVSEAAPPGQLVARISVSDPDDGDFAHVNVSLEGGEGHFALSTQDSVIYL
VCVARQLDREERDAYNLRVTATDSGSPPLRAEATFVLHVTDVNDNAPTFDRQLYRPEPLP
EVALPGSFVVRVMARDPDQGSNGQVTYSLAPGAHTRWFSIDPTSGIITTAASLDYELEPQ
PQLIVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTAT
DADSGPFGLLSYSLGAGLGASGSPPFRIDAHSGDVCTTRTLDRDQGPSSFDFTVTAVDGG
GLKSMVYVKVFVSDENDNPPQFYPREYAASLSAHSTPGTAVLRVRAHDPDQGPHGRLSYH
ILAGNNPPLFALDEHSGLLTVAWPLARRANSVVQLEIGAQDGGGLQAEPSARVNISIVPG
TPVPPVFEQLQYVFSVPEDVAPGTSVGIVQARNPPGRLGSVTLALSGGDPRGLFSLDGAS
GLLQTLRPLDRELLGPVLELEVRAGSGVPPAFAVARVRVLLDDVNDNSPAFPAPEDTVLL
PPNTAPGTPIYTLRALDPDAGVNSRVTFTLLAGGGGAFTVDPTTGHVRLMGPLGPPGGPA
HELELEARDGGSPPRTSHFRLRVVVQDLGTRGLAPHFDSPSYRVDLPSGTTPGTKVLQVQ
AQAPDGGPITYHLAADGPSNPFGLEPQSGWLWVRAALDREAQELYTLKVLAVSGSKAELG
QQTGTATVRVSILNQNDHSPRLSEEPTFLAVAENQPPGTSVGRVFATDRDSGPNGRLTYS
LRPLSEDSKAFRIHPQTGEMTTLQTLDRERQSSYQLLVQVQDGGSPPRSTTGTVHIAVLD
LNDNSPSFLQASGAAGGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSEL
FTLHPHSGELLTAAPLIRAERPHYVLTLSAHDQGSPPRSSSLQLLLQVLPSVRSAEPPAD
PSEPDPAAPVPVVLTVTAAEGLQPGSLLGSVASPEPAGVGALTYTLVGGADPEGTFALDA
ASGRLYLARPLDFEAGPAWRALTVRAEGPGGAGARLLRVQVRVQDENEHAPAFARDPLAL
ALPENPDPGAALYTFRASDADGPGPNSDVRYRLLRQEPPVPALRLDARTGALSAPRGLDR
ETTPALLLLVEASDRPANASRRRAARVSARVFVTDENDNAPVFASPSRVRIPEDQPPGPV
ALHVVARDPDLGEAARVSYRLAAGGDGYFRLHSSTGALSVVRSLDREQRAEHVLTVVAAD
HGSPPRSATQLLTVSVADVNDEAPAFQQQEYSVLLRENSPPGTSLLTLRATDPDLGANGQ
VTYGGISGESFSLDPDTGVLTTLQALDREEQEEINLTVYARDRGSPPLLTHVTVRVAVED
ENDHAPTFGSAHLSLEVPEGQDPQTLTVLRASDPDVGANGQLQYHILDGDPSGAFVLDLA
SGEFGTMRPLDREVEPAFQLRIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVE
VPEDAPAGTLLLQLQAHDPDAGANGRVTYYLGTGAAGAFLLEPSSGELRTATALDREQCP
SYAFSVSAVDGAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLHLPRPGPSLSTPTLAL
ATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARSPVALGPRDRVLFVVATDL
GRPARSATGVVIVGLQGESERGPRFPRASSEAMLRENAPPGTPIVSPKAVHAGGSSGPIT
YSILSGNEKGTFSIQPSTGAITVRSAEGLDFETSPRLRLVLQAESGGVFAFSVLTLTLQD
ANDNAPRFLRPHYVAFLPESRPLEGPLLQVEADDLDQGPSGQISYSLAASQPARGLFHVD
PGTGTITTTAILDREIWAETRLVLMATDRGSPALVGSATLTVMVIDTNDNRPTIPQPWEL
RVSEDALLGSEIAQVTGNDVDSGPVLWYVLSPSGPQDPFSVGRYGGRLSLTGPLDFEQRD
CYHLQLLAHDGPHEGHANLTVFVEDVNDNAPAFSQSLYQVTLLEHTPPGSAILSVSATDR
DSGANGHISYHLASPAEGFSVDSNNGTLFTTVGTVALGQEGPGVVDVVLEARDHGMPGRA
ARATVHVQLQDQNDHTPSFTLPHYRVAVTEDLPPGSTLLTLEATDADGSRTHATVDYSIV
SGNRGRVFQLEPRLAETEEGNGLGPRALGCLVLLEPLDFESLTQYNLTVAAADRGQPSRS
SAVPVTVTVLDVNDNPPVFTRASYRMAVPEDTPVGAELLHVEASDADPGPHGLVRFTLSS
GDPSGLFELDESSGALRLARPLDCETQARHQLVVQAADPAGAHFALAPVTIEVQDVNDHG
PVFPLSLLSTSLSENQPPGILVTTLHAIDGDAGAFGRLRYSLLEAGPGPEGREAFALNSS
TGELRARVAFDYEHTGSFQLLVGAVDAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVP
EGARRGYSLGHVQATDEDGGADGLVLYSLATSSPYFGINQTTGALYLRVDSRAPGSGTGT
SGSGGRTRREAPRELRLEVVARGPLPGSRSATVPVTVDITHTALGLAPDLNLLLVGAVAA
SLGVVVVLALAALVLGLVRARSRKAEAAPGPMSQAAPLASGSLQKLGREPPSPPPSEHLY
HQTLPSYGGPGAGGPYPRGGSLDPSHSSGRGSAEAAEDDEIRMINEFPRVASVASSLAAR
GPDSGIQQDADGLSDTSCEPPAPDTWYKGRKAGLLLPGAGATLYREEGPPAPATAFLGGC
GLSPAPTGDYGFPADGKPCVAGALTAIVAGEEELRGSYNWDYLLSWCPQFQPLASVFTEI
ARLKDEARPCPPAPRIDPPPLITAVAHPGAKSVPPKPASTAATRAIFPPASHRSPISHEG
SLSSAAMSPSFSPSLSPLAARSPVVSPFGVAQGPSASALSAESGLEPPDDTELHI
NT seq
9888 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaggaggagggcattgcgccttcctgcactggcatgcagagctgcaggcccctc
cccctgctaccactgctgctgctgctgctgggggctggggtgtcaggtgcctggggtcag
gccgggagcttggacctacagatcgatgaggagcagccagcaggcaccctgattggggac
atcagtgcagggctccctccaggcacagcagcgcctcccatgtacttcatctccgcccaa
gagggcagtggggtgggcacagacctggccatcgatgagcacagcggagtggtccgtaca
gcccgcgtcttggaccgtgagcggcgagatcgctaccgattcactgcagtcactcctgat
ggcgccaccgtagaagtgaccgtgcgagtggctgacatcaatgaccatgctccggctttc
ccacaggctcgggctgccctgcagatacccgagcatacagctctcggcacccgctacccg
ctggagcctgcccgtgatgcagatgctggccgcctaggaacccagggctatgcactgtct
ggtgatggggctggagagaccttccagctggagacacgtcctggtccagatggggctccc
gtgccagaactggtagttaccggggagctggaccgagagaaccgctcacactacatgctg
caactggaggcctacgatggtggttcacccccgcggagggcccaggccctgctggatgtg
acactgctggacatcaatgaccatgccccagctttcaatcagagccgctatcatgctgtg
gtgtctgagagcctggcccctggcagtcctgtcttgcaggtgtatgcatctgatgccgat
gctggtgccaatggagctgtgacctatgagatcaaccggaggcagagtgagggtgatggg
cccttctccattgacgcacacacaggactgctgcggctggagcggccactggactttgag
caacggcgggtccatgaactggtggtgcaggcgcgggacggtggggctcaccctgagctg
ggctcagcctttgtgactgtgaacgtgcgagatgccaacgacaatcagccctccatgact
gtcatcttcctgagtgcagatggctccccgcgagtgtccgaggctgccccacctggccag
cttgttgctcgcatctctgtgtcagacccagatgatggcgactttgctcatgtcaacgtt
tccctggagggtggagagggccattttgccctcagcactcaggacagtgtcatctaccta
gtgtgtgtggctcggcagctggatcgggaggagcgggatgcctataacttgcgggttacc
gccacagactcaggctcacccccactgcgggctgaggctacctttgtactacatgtcact
gatgtcaatgacaatgcgcctacctttgaccgtcagctctacagacctgagccccttcct
gaagttgcactgcctggcagcttcgtggtgcgagtgatggcccgggatcctgaccagggc
agtaatggtcaagtcacctatagcctggcccctggtgcccacacccgctggttctccatc
gaccccacttcaggcatcattaccacggctgcctcgctggactatgaattggaacctcag
ccacagctgattgtggtggccacagatgggggcttgcctcctcttgcctcgtctgccaca
gtcagtgtggccctgcaagatgtgaatgataatgagccccagttccagagaactttctac
aatgcctcactgcctgagggcacccagcctggaacctgcttcctgcaggtgacggccaca
gatgcagacagtggtccatttggcctcctctcctattccttgggggccggacttggcgcc
tcagggtctcccccgttccgcatcgatgcccacagcggtgatgtgtgcacaacccggacc
ctggaccgagatcagggaccctcaagctttgacttcacagtgacggctgtggatggggga
ggcctcaagtccatggtatacgtgaaggtgtttgtgtcagacgagaatgacaacccaccg
cagttttacccacgggagtatgctgccagtctgagtgcacatagtacaccaggcacagct
gtgctgagggtgcgtgcccatgaccctgatcaggggccccacgggcgactctcctaccac
atcctggctggcaataaccccccactctttgccttggatgagcactcagggctgttgaca
gtagcctggcccttggccagacgggccaactctgtggtgcagctggagattggggctcag
gatggaggtggcctgcaggcagagcccagtgcccgagtcaacatcagcattgtgcctgga
acccctgtgccaccagtatttgagcaactacagtatgtcttttctgtaccagaggatgtg
gcaccaggcaccagtgtgggcatagtccaggcacgcaatccaccaggtcgcttggggtct
gtgacccttgccctatcaggtggggatccccgaggactcttctccttagatggggcctca
gggctgttacaaacacttcgccctctggaccgggagctgctgggaccagtgctggagctg
gaggtgcgggcaggcagtggagtgcccccggcttttgctgtagctcgggtgcgtgtgctg
ctggatgatgtgaatgataactcccctgccttccctgcacctgaagacacagtgttgctg
ccgccaaacactgccccagggacccccatctatacacttcgggctctggaccctgatgca
ggtgttaacagtcgagtcacctttaccctgcttgctgggggtggtggggccttcactgtg
gaccccactacaggccatgtacggcttatgggacctctggggcccccaggggggccagcc
catgagctggagttggaggcccgagatggaggctccccaccccgcaccagccactttcga
ctacgggtggtggtacaggatttggggacccgtgggctggctcctcattttgacagccct
tcctaccgtgtggacctgccctcaggcaccacccctggaactaaggtcctgcaagtgcaa
gctcaagcaccagatgggggccccatcacctaccatcttgcagcagatgggccaagtaac
ccctttggcctggaaccacagagtggttggctatgggtgcgagcagcactggaccgtgag
gcccaggagttgtacacactgaaggtactggcagtgtctgggtccaaagctgagttgggg
cagcagacaggcacagccaccgtgagggtcagcatcctcaaccagaatgaccacagtccc
cgcttgtctgaggagcccaccttcctggctgtggctgagaaccagcccccagggaccagc
gtgggccgggtctttgccactgaccgagactcaggacccaatggacgtctgacctacagc
ctgcgaccgctgtcagaagacagcaaggccttccgcatccacccccagactggagagatg
accacactccaaaccctggaccgagagcggcagagcagctaccagctcctggtgcaggtg
caggatggggggagcccaccccgtagtaccacaggcaccgtgcacatcgcagtactcgac
ctcaacgacaacagccccagcttcctgcaagcttccggggctgctggcgggggcctccct
atacaggtaccagatcgagtgcctccagggacactggtgacgactctgcaggccaaggat
ccagatgagggggagaacggcaccatcctgtacacactaactggtcctggctcagagctc
ttcactcttcaccctcactcgggggagctgctcactgcagcacccctgatccgagcagag
cggccacactacgtgctgactttgagtgctcacgaccaaggcagcccccctcggagctcc
agcctccagctgctgctgcaggtgcttccctcagttcgctccgctgagcccccagcagat
ccctcagagccagacccagcggctccagtgcccgtcgtgttgacggtgacagcggccgaa
gggctgcagccgggctccctgttgggctctgtggcgtcgccggagccggcgggggtgggc
gcactcacctacacattggtgggcggcgccgacccagagggcaccttcgcgctggacgcg
gcctcagggcgcttgtacctggcgcggcccctggacttcgaggcgggcccggcgtggcgc
gctctcactgtgcgcgctgagggcccgggaggcgcgggggcgcggctgctgcgcgtgcag
gtgcgcgtgcaggacgagaacgagcacgcgccggccttcgcgcgcgatccgctggcgttg
gcgctgccggagaacccggatcctggcgcggcgctgtacaccttccgcgcgtcggacgcc
gacggcccgggcccgaacagcgacgtgcgctaccgcctgctgcgccaggagccgccggtg
cccgcgcttcgcctggacgcgcgcaccggggcgctcagcgcaccgcgaggcctggaccgg
gagaccacacccgccctgctgctgctcgtggaagcctccgaccggcccgccaacgccagc
cgccggcgcgcagcgcgcgtctcggcgcgcgtctttgtcacggatgagaatgacaacgcg
cccgtcttcgcctcgccctcacgtgtgcgcatccccgaggatcagccgcccgggccggtg
gcgctgcacgtggtagcaagggacccggacttgggcgaagccgcacgcgtgtcctatcgc
ctggcagctggcggggacggctacttccggctacactccagcaccggagcgctgtccgtg
gtgcggtccctggaccgggaacagcgagctgagcacgtactgacagtggtggccgccgac
cacggctccccgccgcgctcagccacgcagctcctgactgtcagtgtcgctgacgtcaac
gacgaggcacccgctttccagcagcaggagtacagcgtcctcttgcgtgagaacagcccg
cctggcacttctctgctcactctgcgggcaaccgacccagacctgggggccaatgggcaa
gtgacttatggaggcatctctggcgaaagcttctccctggatccagacactggagttctc
acgactcttcaggccctggatcgcgaggagcaggaggagatcaacctgacagtgtatgcc
cgggacaggggctcacccccgctgctgacccatgtcacagtgcgagtggccgtggaggat
gagaatgaccatgccccaacctttgggagtgcccacctctccctggaggtgccagagggt
caggacccccagacccttacggtgctgcgggcctctgacccagacgtgggagccaatggg
cagctgcagtaccacatcctggatggggacccatcaggagcctttgtcctagacctagct
tctggggagtttggcaccatgaggccactagaccgagaggtggagccagcattccagctg
cggatagaggcccgggatggaggccagccagctctcagtgctactctgcttgtgacagtg
acagtgctggatgccaatgaccatgccccagccttccctgtgcctgcctactctgtggag
gtgcctgaggatgcacctgcagggaccctgttgctgcagctacaggctcatgaccctgat
gctggggccaacggccgtgtgacctactacctgggtacaggtgcagcaggagccttcctg
ctggagcccagctctggggaattacgcacagccacagccctagacagagagcagtgtccc
agctatgccttttctgtgagtgcggtggatggtgcagctgctgggcccctgagcaccacg
gtacctgtcaccatcaccgtgcgtgatgtcaatgaccatgcacccaccttccccaccagt
cccctgaggctgcacctgccccgcccaggccccagccttagcaccccgaccctggctctg
gccactctgcgagctgaagaccgtgatgctggtgctaatgcctccatcctataccggctg
gcaggcacgccacctcctggcaccaccgtggactcttacactggtgaaatacgtgtggcc
cgctcacctgtagccctgggcccccgggatcgtgtcctcttcgtcgtggccaccgacctt
ggccgtccagctcgctctgccactggtgtggtcattgttgggctgcagggggagtctgag
cgtggaccccgctttcctcgggctagtagtgaagccatgctccgtgagaatgcgccccca
gggactcccattgtctcccctaaggctgtccatgcagggggctcaagtggaccaatcacc
tacagcattctcagtgggaatgagaaagggacattttccatccagccgagtacaggagcc
atcacagttcgctcggcagaggggctggactttgagaccagcccacgactgcgactggtg
ctgcaagcggagagtgggggagtctttgccttctccgtgctgaccctaaccctgcaagat
gccaatgacaatgctccccgcttcctgcggccccactacgtggccttcctgcctgagtcc
cggcccttggagggacctctgctgcaggtggaggcagatgacctggaccaaggccccagt
ggacagatctcctacagcctggccgcatcccaaccagcacggggtttgttccatgtagac
ccaggcacaggcactattactaccacagccatcctggaccgtgagatctgggctgaaaca
cggctggtactgatggccacagacagaggaagcccagccctggtgggctcagctaccctg
acggtgatggtcatcgacaccaatgataatcgccccaccattccccagccctgggagctc
cgagtgtcagaagatgcacttttgggctcagagattgcacaggtaacagggaatgatgtg
gactcaggaccggtgctgtggtacgtgctgagcccatctggaccccaggatcccttcagt
gtaggtcgctatggaggccgcctctccctcacgggccccctggactttgagcaacgtgac
tgctatcacctgcagctgctggcacatgatgggcctcatgagggccatgctaacctcaca
gtgtttgtggaggatgtcaatgacaatgcacctgctttctcacagagcctctaccaggtg
acactgcttgaacacacacctccaggcagtgccattctctccgtctctgccactgaccgg
gattcaggtgccaatggtcacatttcctaccacctagcttcccctgctgagggcttcagt
gttgactccaacaatgggactttgttcacaacagtggggacagtggccttgggccaggag
gggccaggagtggtggacgtggtgctggaagcacgagatcatgggatgccaggacgggca
gcaagagccacagtgcatgtgcagctgcaggaccagaatgaccacacccccagcttcaca
ttgccacactaccgtgtggctgtgactgaggatctgccccctggttccaccctgctcacc
ctggaggccacggatgccgatggaagccgcacccatgccaccgtggactatagcattgtc
agtggcaaccggggccgagtcttccagctggaaccccggctggctgagactgaggaaggt
aatggactaggcccccgggcactgggctgcctggtgttgcttgagcctctagactttgaa
agcctaacccagtacaacttaactgtggctgcagctgaccgggggcagccttctcgcagt
tcagccgtgcctgtcaccgtcactgtgctggatgtcaatgacaacccccctgtcttcact
cgagcgtcctaccgcatggcggttcccgaggacacacctgttggagctgagctgctgcat
gtggaggcctctgacgctgacccgggtcctcatggccttgtgcgtttcacccttagctca
ggtgacccttctgggctctttgaactggatgagagctcaggtgccttgcgactcgcccgc
cccttggactgtgagacccaggctcgacatcagcttgtagtgcaggctgccgaccctgct
ggggcacactttgctctggcaccagtgaccatcgaggtccaggatgtgaatgaccatggc
ccagtcttcccactgagcttgctcagcaccagcctgtcagagaaccagcctccaggcatt
cttgtgaccactctgcatgcgattgatggggatgctggggcttttgggaggctccgctac
agcctgttggaggccgggccagggcctgagggccgtgaagcatttgcactgaacagctca
acaggggagttgcgggcacgagtggcctttgactatgagcacacaggaagcttccagctg
ctggtgggtgctgtggatgctgggaatctctcagcctcggtcactgtgtccgtactggtg
acaggggaggatgagtatgacccagtattcctggctccggctttccacttccaggtgcca
gaaggtgcccggcgtggctacagcctgggtcatgtgcaggccacagatgaggatggaggt
gccgatggcctggtgctctattcccttgccacctcttccccctattttggtatcaaccag
actacaggtgccctgtaccttcgagtggacagccgggcaccaggcagcggaacaggcact
tctgggagtggaggccggacacggcgtgaggcaccacgggagctgaggctggaggtggtg
gcacgggggcctctgcctggttcccggagtgccacagtgcccgtgactgtggatatcacc
cacactgcactaggcctggcacccgacctcaacctgctattggtgggggctgtggcggcc
tccctgggagttgtggtggtgcttgcactagcagccctggtcctagggctggtgcgggcc
cgtagccgcaaggctgaggcagcacctggtccgatgtcacaggcagcgcctctggccagt
ggctctctgcagaagctaggccgagagccacccagcccaccaccctcagagcacctctat
caccagactctccccagctatggtgggccaggagctggaggaccctacccccgaggtggc
tccttggacccttcacactccagtggtcgaggctcagcagaggctgcagaggatgacgag
atccgcatgatcaatgaattcccgcgtgtggccagtgtggcttcttccttggctgcccgt
ggccccgactcaggcatccagcaggatgcagatggactgagtgacacatcctgcgagcca
cctgcccctgacacctggtataagggccgcaaggcagggctgctgctgccaggtgcagga
gccactctgtaccgagaagagggcccaccagcccctgccacagccttcctggggggctgt
ggcctgagccctgcacccaccggggactatggcttcccagcagatggcaagccatgtgtg
gcaggtgcactgacagccattgtggctggtgaggaggagctccgtggcagctataactgg
gactacctgctgagctggtgccctcagttccagccactggccagtgtcttcacagagatt
gcccggctcaaggatgaagctcggccatgccccccggctccccgtattgacccaccaccc
ctcatcactgctgtggcccacccaggagccaagtctgtgccccctaagccagccagcacg
gcagcaacccgggccatcttcccaccagcctctcaccgctcccccatcagccacgaaggc
tccctatcctcagctgccatgtctcccagcttctcaccctcactgtctcctctggctgct
cgctcacccgttgtctcgccatttggggtggcccagggcccctcagcctcagcactcagc
gcagagtccggcctggagccacccgatgacacagagctgcacatctag
DBGET
integrated database retrieval system
