Mirounga leonina (Southern elephant seal): 118004729
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Entry
118004729 CDS
T07472
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04360
Axon guidance
mlx04724
Glutamatergic synapse
mlx04726
Serotonergic synapse
mlx04929
GnRH secretion
mlx04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
118004729 (TRPC1)
09154 Digestive system
04972 Pancreatic secretion
118004729 (TRPC1)
09156 Nervous system
04724 Glutamatergic synapse
118004729 (TRPC1)
04726 Serotonergic synapse
118004729 (TRPC1)
09158 Development and regeneration
04360 Axon guidance
118004729 (TRPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mlx04040
]
118004729 (TRPC1)
Ion channels [BR:
mlx04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118004729 (TRPC1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
118004729
NCBI-ProteinID:
XP_034852166
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MMAALYPSTDLSGASSSSLPSSPSSSSSPNEVMALKDVREVKEENTLNEKLFLLACDKGD
YYMVKKILEENNSGDLNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSADALLVAID
SEVVGAVDILLNHRPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLL
KQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFE
LSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSSDEPLDKRG
LLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGI
FWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPA
LERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNK
FHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGK
FLGMFLLVLFSFTIGLTQLYDKGYTPKEQKDCVGIFCEQQSNDTFHSFIGTCFALFWYIF
SLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKE
WKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWICSHTSKGKVKRQNSLKE
WRNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEIRDLL
GFRTSKYAMFYPRN
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggctctgtacccgagcacggatctctcgggcgcctcctcctcctccctccct
tcctccccatcctcctcttcgtcgccgaacgaggtgatggcgctgaaggatgtgcgggag
gtgaaggaggagaacaccctgaatgagaagcttttcttgctggcgtgcgacaagggtgac
tattatatggttaaaaagattttggaggaaaacaattcaggtgacttgaacataaattgc
gtagatgtgcttgggagaaatgctgttaccataactattgaaaacgaaaacttggatata
ctgcagcttcttttggactacggttgtcagtccgcagatgcacttttggtggcaatcgac
tctgaagtagtgggagctgttgatatactacttaatcatcgaccaaaacgatcatcaaga
ccaactatagtaaaactaatggagcgaattcagaatcctgagtattcaacaactatggat
gttgcacctgtcattttagctgctcatcgtaacaactatgaaattcttacaatgctgtta
aaacaggatgtatctttacccaagccccatgcagttggctgtgaatgcacactgtgttct
gcaaagaacaaaaaggacagtctccgacattccaggtttcgtcttgatatatatcgctgt
ttggccagtccagctctaataatgttaacagaggaggatccaattctgagagcatttgaa
cttagtgctgatttaaaagaattaagccttgtggaggtggaattcaggaatgattatgag
gagctagcccgacaatgtaaaatgtttgctaaagatttgcttgcacaagcccggaattca
cgagaattggaagttatcctaaaccatacatctagtgatgagcctcttgacaaacgggga
ttactagaagaaagaatgaatttaagtcgtctaaaacttgctatcaaatataaccaaaag
gagtttgtctcacagtctaactgccagcagttcctgaacactgtttggtttgggcagatg
tcaggttaccgacgtaagcccacctgtaagaagataatgactgttttgacagttggcatc
ttttggccagttttgtcactttgttatttgatagctcccaaatctcagtttggcagaatc
attcacactccttttatgaaatttattattcatggagcatcatatttcacattcctgctg
ttattaaacctctactctcttgtctacaatgaggataagaaaaacacaatggggccagcc
cttgaaagaatagactatctacttatactgtggattattgggatgatttggtcagacatt
aaaagactctggtatgaagggttggaagactttttggaagaatctcgtaatcaactcagt
tttgtcatgaattcactttatttggcaacttttgccctcaaagtggttgctcacaacaag
tttcatgattttgctgaccggaaggactgggacgcattccatcctactctggtggcggaa
gggctttttgcatttgcaaatgttctgagttatcttcgtctcttttttatgtatacaaca
agctccatattgggtccattacagatttcaatgggacagatgttacaagattttggaaag
tttcttgggatgttccttcttgttttgttttctttcacaattggactgacacaactgtat
gataaaggctataccccaaaagaacagaaggactgtgtcggcatcttctgtgaacagcaa
agcaatgataccttccattcgttcattggcacttgctttgctttgttctggtatattttc
tccttagcacatgtggcaatctttgtcacaagatttagttacggagaagaattgcagtcc
tttgttggagctgttattgttgggacgtacaatgttgtggttgtgatcgtgcttaccaag
ctgctggtggcaatgcttcataaaagcttccagttgatagcaaatcatgaagacaaagaa
tggaagtttgctcgagcaaagttatggcttagctactttgatgacaaatgtacattaccc
ccacctttcaacatcattccttcaccaaagactatttgctatatgattagtagcctcagt
aagtggatttgctctcatacatcaaaaggcaaggttaaacggcaaaacagtttaaaggaa
tggagaaatctgaaacaaaagagggatgagaactaccaaaaagtgatgtgctgcttggtg
catcgttacctgacatccatgaggcagaagatgcaaagtacagatcaggcaactgtggaa
aacctaaatgaactacgccaagatctgtcaaaattccgaaacgaaataagggatttactt
ggctttcggacttctaaatatgctatgttttatccaagaaattaa
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integrated database retrieval system
