Mirounga leonina (Southern elephant seal): 118004775
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Entry
118004775 CDS
T07472
Name
(RefSeq) LOW QUALITY PROTEIN: histone-binding protein RBBP4-like
KO
K10752
histone-binding protein RBBP4
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03082
ATP-dependent chromatin remodeling
mlx03083
Polycomb repressive complex
mlx04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118004775
03083 Polycomb repressive complex
118004775
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
118004775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mlx03036
]
118004775
Chromosome and associated proteins [BR:
mlx03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
118004775
Histone modification proteins
HAT complexes
HATB complex
118004775
HDAC complexes
Sin3A-HDAC complex
118004775
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
118004775
PRC2.2
118004775
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
118004775
Heterochromatin formation proteins
Other heterochromatin formation proteins
118004775
Chromatin remodeling factors
NuRD complex
118004775
NuRF complex
118004775
NuRF complex (fruit fly)
118004775
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_RIG_1st
MIOS_WD40
WD40_RFWD3
eIF2A
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
118004775
NCBI-ProteinID:
XP_034852227
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MADKEATFDDAVEERVINEEYKIWKKNIPFLYDLVMTHALEXPSLTSQWLPDVTRPEGKD
FSIHRLVLGTHTSDEQNHLVIASMQLPNDDAQFDASHYDSEKGEFGGFGPVSGKIEIEIK
INHEGEVNQARYMPQNPYIIATKTPSSDVLVFDDTKHPSKPDPSGECNPDLRLCGHQKEG
YGLSWNPNLSGHLLSASDDHTICLWDISTVPKEGKVVDAKTIFTGHTVVVENVSWHLLHE
SLFGSVADDRKLIIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSANKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDHRLNVWDLSKIGGEQSPEDAE
DGPPELLFIHGGHTAKISDFAWNPNEPWVICSVSEDSIMQVWQMAENIYNDEDPEGSVDP
EGQGS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaggaagcaacctttgatgatgcagtagaagaacgtgtgatcaacgaagag
tacaaaatatggaaaaagaacatcccttttctttacgatttggtgatgacccatgctctg
gagtgacctagcctaacttcacagtggcttccagatgtaaccagaccagaagggaaagac
ttcagcattcatcgacttgtcctgggaacacacacgtcagatgaacaaaaccatcttgtg
atagccagtatgcagctccctaatgatgatgctcagtttgatgcttcacactatgacagt
gagaaaggagaatttggaggttttggcccagttagtggaaaaattgaaatagaaatcaag
ataaaccatgaaggagaagtaaaccaggcgcgttatatgccccagaacccttacatcatt
gcaacaaagacaccatccagtgatgttcttgtttttgacgatacaaaacatccttccaaa
ccagacccttctggagagtgcaacccagacttgcgtctgtgtggacatcagaaggaaggc
tatggactttcttggaacccaaatctcagtgggcacttacttagtgcttcagacgaccat
accatctgcctctgggacatcagtactgttccaaaggaaggaaaagtggtggatgcgaaa
accatctttacaggacatacagtggtagtagaaaatgtttcctggcatttgctccatgag
tctctgtttgggtcagttgctgatgatcggaaacttataatctgggatactcgttcaaac
aatacttccaaaccaagccactcagttgatgctcacactgctgaagtgaactgcctatct
ttcaatccttatagtgagttcattctggccacaggatcagccaacaagactgttgccttg
tgggatctgagaaatctgaaacttaagttgcattcctttgaatcacataaggatgaaata
ttccaggttcagtggtcacctcacaatgagactattttggcttccagtggtactgatcac
agactgaatgtctgggatttaagtaaaattggaggggaacaatccccagaagatgcagaa
gatgggccaccagaattgttgtttattcatggtggtcacactgccaaaatatctgatttc
gcctggaatcccaatgaaccttgggtgatttgttctgtatcagaagatagtatcatgcaa
gtgtggcaaatggcagagaacatttataatgatgaagatcctgaaggaagtgtggatcca
gaaggacaagggtcctag
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