KEGG T07472: 118005357

Mirounga leonina (Southern elephant seal): 118005357

Entry

118005357         CDS       T07472

Symbol

SMARCC1

Name

(RefSeq) SWI/SNF complex subunit SMARCC1

K11649

SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C

Organism

mlx Mirounga leonina (Southern elephant seal)

Pathway

mlx03082

ATP-dependent chromatin remodeling

mlx04714

Thermogenesis

mlx05225

Hepatocellular carcinoma

Brite

KEGG Orthology (KO) [BR:mlx00001]
09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    118005357 (SMARCC1)
09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    118005357 (SMARCC1)
09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    118005357 (SMARCC1)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mlx03021]
    118005357 (SMARCC1)
   03036 Chromosome and associated proteins [BR:mlx03036]
    118005357 (SMARCC1)
Transcription machinery [BR:mlx03021]
Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     118005357 (SMARCC1)
Chromosome and associated proteins [BR:mlx03036]
Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    118005357 (SMARCC1)
   PBAF complex
    118005357 (SMARCC1)
   GBAF(ncBAF) complex
    118005357 (SMARCC1)

SSDB

Motif

Pfam:

SWIRM-assoc_2 SWIRM-assoc_3 SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6 HEAT_GCN1 Chromo BRCT_2 DUF919 SpeFL

Other DBs

NCBI-GeneID:

118005357

NCBI-ProteinID:

XP_034853146

LinkDB

Position

Unknown

AA seq 1105 aa
MAAAAGGGGLGAAAGAAGAGGAATAAGLAVYRRKDGGPASKFWESPETVSQLDSVRVWLG
KHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCH
ILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLTRPNIYLIPDIDLKL
ANKLKDIIKRHQGTFTDEKSKASHHIYPYPSSQEDEEWLRPVMRKDKQVLVHWGFYPDSY
DTWVHSNDVDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDENRKPVSFRQRI
STKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKE
EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVTTGG
KEDEDPSKGDQSRSLDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK
SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD
PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFG
LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH
FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE
EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEK
METDTDGQQPEKAENKGENETDEGDKAQDGENEKNSEKEQDSEVSEDTKSEEKETEENKE
LTDTCKERESDLGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV
ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ
QQHGQNPQQAHQHSGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGP
GSMIPGQPMPGRMIPTVAANIHPPGSGPAPPGMPPMPGNILGPRVPLTAPNGMYAPPPPP
PPPPPPPADGAPPPPAPGPPASAAP

NT seq 3318 nt +upstreamnt +downstreamnt
atggccgcggcggcgggcggcggcgggctaggggcggcggcgggcgccgcgggcgcggga
ggcgcggcgacggccgcgggcctggccgtttatcggcggaaggacggtggcccggccagc
aagttttgggagagcccggagacggtgtcccagctggattcggtgcgggtctggctgggc
aagcactacaagaagtatgttcatgcggatgctcctaccaacaaaacgctggctgggctg
gtggtacagcttcttcagttccaggaagatgcctttgggaagcatgtcaccaacccggcc
ttcaccaaactcccggcaaaatgtttcatggatttcaaagctggaggcaccttgtgtcac
attcttggggctgcttacaagtataaaaatgaacagggatggcgtagatttgatctacag
aatccatcccgaatggatcggaatgttgaaatgtttatgaacattgaaaaaacattggtg
cagagcaactgtctgaccagacccaacatctacctcattccagacattgatctgaagttg
gctaacaaattaaaagatattatcaaacgacatcaggggactttcactgatgagaagtca
aaagcttcccaccacatttatccatatccttcctcacaagaggatgaagagtggttgaga
ccggtgatgagaaaagataagcaggtgttagtgcattgggggttttacccagacagctat
gatacttgggtccatagtaatgatgttgatgcagaaattgaagatccaccaattccagaa
aagccatggaaggttcatgcgaaatggattttggacactgatgttttcaatgaatggatg
aatgaggaggattatgaggtggacgagaacaggaagcccgtgagctttcgtcagcgaatt
tcaacaaagaatgaagagccagtcagaagtccagagagaagagataggaaagcatcagct
aatgctcgaaagaggaaacattcgccttcccctccacctcctacacccacagaatcccgg
aagaagagtggaaagaaaggccaagctagtctttatgggaagcgcagaagtcagaaagag
gaagatgagcaagaagatcttaccaaggacatggaagacccaacgccggtacccaacata
gaggaagtggtgcttccaaaaaatgtgaacccaaagaaagacagtgaaaacacacctgtt
aaaggaggaactgtcgcagatctagatgagcaggatgaagaaacagtcacaacaggagga
aaggaagatgaagatcctagcaaaggtgatcagagtcgctcacttgaccctggagaagat
aatgtgacagagcagaccaatcacattattattcctagttatgcatcatggtttgattat
aactgtattcacgtgattgaacggcgtgctcttcctgagtttttcaatggaaagaacaaa
tccaagactccagaaatatacttggcatatcgaaattttatgattgacacatatcgccta
aacccccaagaatatttaaccagcactgcttgtcggaggaacttgactggagacgtgtgt
gctgtgatgagggttcatgcctttttagagcaatgggggcttgttaattaccaagtggat
ccagaaagtcgacccatggcaatgggacctcctcctactcctcattttaatgtattagct
gataccccctctgggcttgtgcctctacatcttcgatcacctcaggtccctgctgctcag
cagatgttaaattttcctgagaagaacaaggaaaaaccaattgatctgcagaactttggt
cttcgtactgacatttactccaagaaaaccttagcaaagagtaaaggtgctagtgctgga
agagaatggactgaacaggagacccttttgctcctggaggctctggagatgtataaggat
gattggaacaaagtgtcagagcatgttggaagtcgtactcaggatgaatgcatcctccac
tttctgaggcttcctattgaggacccataccttgagaattcggatgcttccctggggccc
ctggcctaccagcctgtccctttcagtcagtcaggaaacccagtcatgagcactgttgct
tttttggcatcagtggtggaccctcgcgtggcatctgctgcagcaaaagcagctttggag
gagttttctcgggtccgagaggaagtgccactggaactggtcgaagctcatgtcaagaaa
gtgcaagaagcagcacgggcttctgggaaagtggatcccacctatggcctggagagcagc
tgcattgcaggcacaggacctgatgagccagagaaacttgaaggggctgaagaggaaaaa
atggaaacagatactgatggtcaacagcctgaaaaggcagaaaacaaaggggaaaatgaa
acagacgaaggggataaagcacaagatggagaaaatgaaaaaaatagtgagaaggagcag
gacagtgaagttagtgaggataccaaatcagaagaaaaggaaactgaagagaacaaggaa
ctcactgatacttgtaaagaaagagaaagcgatctcgggaagaagaaagtagaacacgaa
atttccgaaggaaatgtggccacggctgccgcagctgctctcgcctcagctgcaaccaaa
gccaagcatctggctgccgtggaggagagaaagatcaagtctctggtggccctgttggtt
gagacacaaatgaagaaattggagatcaaacttcgacattttgaggagctggaaactatc
atggacagagaaaaggaggctttagaacaacagaggcagcagttgctcactgaacgccag
aacttccacatggaacagctgaaatatgccgaattgcgagcccggcagcagatggaacag
cagcagcacgggcagaaccctcagcaggcacaccagcactcaggaggacctggcctggcg
ccgcttggagcagcagggcaccccggcatgatgccccatcagcagccccctccctaccct
ctgatgcaccaccagatgccaccacctcatccaccgcagccaggtcagataccaggtcca
ggttccatgatccctgggcagcccatgccaggccgcatgattcccaccgttgcagccaac
atccacccccccgggagtggcccagcccctcctggtatgcctccaatgccaggaaacatc
ttaggaccccgggtacccctcacggcacctaatggcatgtatgcccctccgccgccgccg
ccaccgccgccgccgccgcccgccgatggagcccctccgcctcccgctccaggcccgccc
gcctcggccgccccttag

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