Mirounga leonina (Southern elephant seal): 118005743
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Entry
118005743 CDS
T07472
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03082
ATP-dependent chromatin remodeling
mlx04714
Thermogenesis
mlx05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118005743 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
118005743 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
118005743 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlx03021
]
118005743 (SMARCA4)
03036 Chromosome and associated proteins [BR:
mlx03036
]
118005743 (SMARCA4)
Transcription machinery [BR:
mlx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118005743 (SMARCA4)
Chromosome and associated proteins [BR:
mlx03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
118005743 (SMARCA4)
Chromatin remodeling factors
BAF complex
118005743 (SMARCA4)
PBAF complex
118005743 (SMARCA4)
GBAF(ncBAF) complex
118005743 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
118005743
NCBI-ProteinID:
XP_034853788
LinkDB
All DBs
Position
Unknown
AA seq
1660 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG
PGGYPQDNMHQMHKPMESMHEKGMSDDPRYSQMKGMAMRSGAHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQLSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP
GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG
LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKAENAEGQTPAIGP
DGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESG
SEEEEEEEEEEQPQPAQPPNLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVS
QALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEM
GLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR
RAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHY
VAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEET
ILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDG
SEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGK
FELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKT
FNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRV
LRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRH
CSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDL
DRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSD
SLTEKQWLKKSDRKYIQDIVSKNAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTS
TRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQ
LPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIY
EDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQD
RLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED
NT seq
4983 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccggacccaccgctgggcggaactcctcggccgggcccttccccgggcccc
ggcccctcccctggagccatgttgggccctagcccgggtccctcaccgggctctgcccac
agcatgatggggcccagtccggggcctccctcagcaggacaccccatcccaacccaggga
cctggaggataccctcaggacaacatgcaccagatgcacaagccaatggagtccatgcat
gagaagggcatgtcagatgacccccgctacagccagatgaagggaatggcgatgcggtcg
ggggcccacgcagggatggggccgccaccaagccccatggaccagcactcccaaggttac
ccttctcccctgggcggctctgagcatgcctccagtccagttccagccagtggcccgtcc
tcaggcccacagttgtcctctgggccaggaggggcccccctggatggtgccgatccccag
gctttgggccagcagaaccggggcccgactccatttaaccagaaccagctgcatcagctc
agagcccagatcatggcatacaagatgctggccagggggcagcccctccccgaccacctg
cagatggcggtgcaggggaagcggccaatgcccgggatgcagcagcagatgccaacacta
cctccaccctctgtgtccgcaacgggacctggccccggccccggccctggccctggcccg
ggtccgggaccagcacctccaaattatagcaggcctcacggtatgggagggcccaacatg
cccccccccggaccctcaggcgtgcctcctgggatgccaggtcagcctcctggagggcct
cccaagccttggcctgaaggacccatggcgaatgctgctgcccccacgagcacacctcag
aagctgatccccccacagccaacgggccgcccctcacctgcgccccccgccgtcccgccc
gctgcctccccagtgatgccgccccagacgcagtcgccggggcagcctgcccagcctgcc
cccatggtgccattgcaccagaagcagagccgtatcacccccatccagaagccgcggggc
ctggaccctgtggagatcctgcaggagcgggagtacaggctgcaggctcgaatcgcacac
cgaattcaggaacttgaaaaccttcccgggtccctggccggggatttgcgaaccaaagcg
accattgagctcaaagcgctcaggctgctgaacttccagaggcagctacgacaggaagtg
gtggtgtgcatgaggagggacacagccctcgagacggccctcaacgccaaggcctacaag
cgcagcaagcggcagtccctgcgtgaggcccgcatcaccgagaagctggagaagcagcag
aagatcgagcaggagcgcaagcgccggcagaagcaccaggaatacctcaatagcattctg
cagcatgccaaggatttcaaagaatatcacaggtcggtcacaggcaaaatccagaagctc
acgaaggcggtggccacctaccatgccaacacggagagggaacagaagaaggaaaatgaa
agaattgagaaagagagaatgcggagactcatggctgaagatgaggaggggtaccgcaag
ctcatcgaccagaagaaggacaagcgcttggcctacctcttgcagcagacagatgagtac
gtggctaacctcacggagctggtgcggcagcacaaggctgcccaggtcgccaaggagaaa
aagaagaaaaagaaaaagaaggcagaaaatgcagaaggacagacgcctgcaatcggacct
gatggcgagcctctggatgagactagccaaatgagtgacctgccggtgaaagtgatccac
gtggaaagcgggaagatcctcacgggcaccgacgcccccaaagcagggcagctagaggcc
tggcttgagatgaacccgggatatgaagtagctccaagatctgatagtgaagaaagtggc
tcagaagaagaggaagaggaggaggaggaggagcagccacagccggcacagcctcccaac
ctgcccgttgaggagaagaagaagattccagatccagacagtgatgacgtctcggaagtg
gacgcccggcacatcattgagaatgccaagcaagacgtggatgacgagtacggcgtgtcc
caggcccttgctcggggcctgcagtcctattatgccgtggcccatgctgtcactgagaga
gtggataagcagtcagcacttatggtcaatggtgtcctcaaacagtaccagatcaaaggc
ttggagtggctggtgtccctgtacaacaacaacctgaatggcatcctggcagacgagatg
ggcctggggaagaccatccagaccatcgctctcatcacgtacctcatggagcacaagcgg
atcaacggaccctttctcatcatagtacctctctccacgctgtcaaactgggcatacgaa
tttgacaagtgggccccctctgtggtgaaggtgtcctacaagggttctccagcagccagg
cgtgctttcgtcccccagctccggagtggcaagttcaacgtcttgctgacgacttacgag
tacatcattaaggacaagcacatccttgcaaagatccgttggaagtacatgatcgttgac
gaaggccaccgaatgaagaaccaccactgcaagctgacacaggtcctcaacactcactac
gtggccccacgccgcctgctgctgacaggcacaccgctgcagaacaagcttcccgagctc
tgggcgctcctcaacttcctgctgcccaccatcttcaagagctgcagcaccttcgagcag
tggttcaacgcacccttcgccatgaccggagaaaaggtggacctgaacgaggaggagacg
attctcatcattcgtcgtctccacaaagtgctgcggccctttctgctccggcggctcaag
aaggaagttgaagcccagttgcctgagaaggtggaatacgtcatcaagtgtgacatgtcc
gccctacagcgcgtgctctaccggcacatgcaggccaagggggtgctgctcaccgacggc
tccgagaaggacaagaagggcaaaggcggcaccaagaccctgatgaacaccatcatgcag
ctgcggaagatctgcaaccatccgtacatgttccagcacatcgaggagtccttctccgag
cacttggggtttaccggtggcatcgtgcaagggctggacctgtaccgagcctcggggaag
tttgagcttctcgataggattcttcccaaactccgtgccaccaaccacaaagtgctgctg
ttctgtcagatgacctccctcatgacgatcatggaagattattttgcgtatcgcggtttt
aaatacctcaggcttgatggaacgacaaaagcggaggaccggggcatgctgctgaaaacc
ttcaacgagcccggctccgagtactttatcttcctactcagcacccgcgccggggggctc
gggctaaacctccagtcggccgacactgtgatcatcttcgacagtgactggaacccccac
caggacctgcaagcccaggaccgcgcccaccgcatcgggcagcagaacgaggtacgggtg
ctccgtctctgcacggtcaacagtgtagaggagaagattctggccgccgccaagtacaag
ctcaatgttgaccagaaggtgatccaggctggcatgtttgaccagaagtcctccagccac
gagaggcgcgccttcctgcaggccatccttgagcacgaggagcaggacgagagcagacac
tgcagcacgggcagcggcagtgccagcttcgcccacactgcccctccgccagcgggcgtc
aaccccgacttggaggagccacctctaaaggaagaagacgaagtgcccgacgacgagact
gtgaaccagatgattgcccggcatgaggaggaatttgacctgttcatgcgcatggacctg
gaccgcaggcgcgaggaggcccgaaaccccaagcggaagccgcgcctgatggaggaagac
gagctcccctcgtggatcataaaggacgatgctgaggtggaacggctgacctgtgaggag
gaagaggagaaaatgttcggtcgcggctcccgccaccgcaaggaggtggactacagcgac
tcgctgacggagaagcagtggctcaagaaaagcgacaggaagtacatccaggacatagta
agcaaaaacgccatcgaggagggcacgctggaggagatcgaagaggaggtccggcagaag
aaatcatctcggaagcgcaagcgggacagcgatgccggctcctccaccccgaccactagc
acccgcagccgtgacaaggacgacgagagcaagaagcagaagaagcgcgggcggccacct
gccgagaagctctccccaaaccctcccaacctcaccaagaagatgaagaagatcgtggac
gctgtgatcaagtataaggacagtagtagtggacgtcagctcagcgaggtgttcatccag
ctgccctcccgcaaggagctgcccgagtattacgagctcatccgcaagcctgtggacttc
aagaagataaaggagcgcatccgcaaccacaagtaccgcagcctcaatgacctggagaag
gacgtcatgctgctgtgccagaacgctcagaccttcaacctggagggctccctgatctat
gaagactccatcgtcctgcagtcagttttcaccagcgtgcggcagaaaatagagaaagaa
gatgacagtgagggcgaggagagcgaggaagaagaggagggcgaggaggaaggctctgag
tctgagtcccgctcagtcaaagtgaagatcaagctgggccggaaggagaaggcacaggat
aggctgaaggggggccggcggcggccgagccgcggttcgcgggccaagccggtggtcagc
gatgatgatagtgaagaggagcaggaggaggaccgctcaggaagtggcagcgaggaagac
tga
DBGET
integrated database retrieval system
