Mirounga leonina (Southern elephant seal): 118006281
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Entry
118006281 CDS
T07472
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03008
Ribosome biogenesis in eukaryotes
mlx05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118006281 (DROSHA)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
118006281 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlx03019
]
118006281 (DROSHA)
03009 Ribosome biogenesis [BR:
mlx03009
]
118006281 (DROSHA)
03036 Chromosome and associated proteins [BR:
mlx03036
]
118006281 (DROSHA)
Enzymes [BR:
mlx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
118006281 (DROSHA)
Messenger RNA biogenesis [BR:
mlx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
118006281 (DROSHA)
Ribosome biogenesis [BR:
mlx03009
]
Eukaryotic type
90S particles
RNase
118006281 (DROSHA)
Prokaryotic type
rRNA processing factors
118006281 (DROSHA)
Chromosome and associated proteins [BR:
mlx03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
118006281 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
5_3_exonuc
YcaO
Motif
Other DBs
NCBI-GeneID:
118006281
NCBI-ProteinID:
XP_034854769
LinkDB
All DBs
Position
Unknown
AA seq
1374 aa
AA seq
DB search
MMQGNTCHRMSFHPGRGCPRGRGGHGARPSAPAFRPQNLRLLHPQQPPVQYQYEPPSAPS
TTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRPPFPVPPCFPPM
PPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPP
NFNSFQNNPSSFPPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYEDHRHRDHSHGR
GERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDSRRS
PSLERSYKKEYKRSGRSYGLPVVPEPAGCTPELPGEIIKNTDSWAPPPETVNHRSPSREK
KRARWEEEKDRWSDSQSTGKEKNYTSIKEKEPEETLPDKNEEEEEELLKPVWIRCTHSEN
YYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESS
SESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSA
KARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVSPPTNFLTDRPTVIEYDDHEYI
FEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSLFLFRDILELY
DWNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCSKALVPEEEIA
NMLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPA
QLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKLAQREEALQKIRQKNTMRREVTV
ELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHP
SHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTPS
RINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDR
FMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWLN
YPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTL
GHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYA
ITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWND
PKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQA
EMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEKEPDETEDIKK
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaggcaatacgtgtcatagaatgtcgttccacccagggcgagggtgtccccga
gggcggggaggacatggagccagaccctcagccccagccttcaggccccaaaatctgaga
ctgcttcaccctcagcagcctcctgtgcaatatcaatacgaacctccaagtgccccttcc
accacattctcgaactctccagcccccaattttctgcctccacgaccagactttgtcccc
ttccctcctcccatgcctccatcagcccaaggccctcttcctccctgccctatacggccc
cccttcccaaaccaccagatgaggccccccttccccgtgcctccttgttttcctcctatg
ccacctccgatgccctgtcctaataaccccccagtccctggagcacctcctggacaaggc
actttccccttcatgatgccccctccttccatgccccaccccccaccccctcctgtcatg
ccacagcaggtcaattatcagtaccctccaggatactcacaccataatttcccacctccc
aattttaatagcttccagaacaaccccagttctttcccgcccagtgctaataacagcagt
agtcctcattttaggcacctccctccatacccactccccaaggctcccagcgagagaaga
tccccggaaaggctcaaacactacgaggatcacaggcaccgggatcacagtcatgggcga
ggcgagaggcatcggtccctggatcggcgggaacgaggccgaagtcctgacaggagaaga
caagacagccgctacagatcagattatgaccgagggagaacgccctcccgtcaccggagc
tatgagcgcagcagagagcgggaacgggagagacacaggcaccgggacagccgaagatca
ccatctctggaaaggtcctacaaaaaagagtataagagatctggaaggagttacggtttg
ccggttgtccctgaacctgctggatgcacaccagaattacctggggagattattaaaaat
acagattcttgggccccacccccggagactgtgaatcatcgctccccaagtagggagaaa
aagagagctcgttgggaggaagaaaaagacagatggagtgacagccagagcactggcaaa
gagaagaattatacctcaataaaggaaaaagagccggaggagacactgcctgacaaaaat
gaggaggaggaagaagaacttcttaagcctgtgtggattcgctgcacgcactcagaaaac
tactactccagtgaccccatggatcaggtgggagattctactgttgttggaacaagtagg
ctgcgtgacttatatgacaaatttgaggaagagctggggagtaggcaagaaaaggccaaa
gctgctagacctccatgggagcctcccaagacgaagctagatgaagatttggagagttcc
agtgaatccgaatgtgagtctgatgaggacagcacctgttcgagcagctcagactctgaa
gtttttgatgtcattgcagaaatcaaacgtaaaaaggcccaccctgaccggctgcatgat
gaactttggtacaatgacccaggccagatgaatgatgggccactctgcaaatgcagcgcc
aaagcaagacgcacaggaatcaggcacagcatttatcccggagaagaggccatcaagccc
tgtcgtcccatgaccaacaatgctggcagacttttccactatcgaattacagtctcccct
cctacaaactttttgactgacagaccaactgttatagaatatgatgatcatgagtatatc
tttgaaggattttctatgtttgcccatgcccccctgaccaatattccactgtgtaaagta
atcaggttcaacatagactacacaattcatttcattgaggagatgatgcctgagaatttt
tgtgtaaaaggacttgaactcttttcattattcctgttcagagatattttggaattgtat
gactggaatcttaaaggccctttgtttgaagacagtcctccctgctgcccaagatttcat
ttcatgccacgttttgtgagattccttccagatggaggaaaggaagtgctgtccatgcac
caaattctcctttacttattacggtgtagcaaagccctggttcctgaagaggagattgcc
aatatgcttcagtgggaagaacttgagtggcagaaatatgcagaagaatgcaaaggcatg
attgtcaccaaccctggaacgaaacctagctctgtccgcattgatcaactggatcgtgaa
cagttcaaccctgatgtgattacttttccgattatcgtccactttgggatacgccctgca
cagttgagttatgcaggagacccacagtaccagaaactctggaagagttacgtgaaactt
cgccacctcctagcaaatagtcccaaagttaaacaaactgacaaacagaagctggcgcaa
agggaggaagcgctccaaaaaatacgacagaagaatacaatgaggcgagaagtaacagtg
gagctaagtagtcaaggattttggaaaactggcatccgttctgatgtctgtcagcatgca
atgatgttgcctgttttgacccatcatatccgctaccaccaatgtctaatgcatctagac
aagttgataggatatactttccaagatcgttgtctattacagctggccatgactcatccg
agtcatcacttaaattttggaatgaatcctgatcatgccagaaattctttgtctaactgt
ggaattcggcagcccaaatatggagatagaaaagttcaccacatgcatatgaggaaaaaa
ggaattaacaccttaataaatattatgtcacgccttggccaagatgacccaactccctca
aggattaatcacaatgaaaggttggagttcctaggtgatgctgttgttgaatttctgacc
agtgtccatttgtactatttgtttccgagtctggaagaaggaggattagcaacttatcgt
actgccattgttcagaatcagcaccttgccatgttagcaaagaaacttgaactggatcga
tttatgctttatgctcatggacctgacctttgtagagaatcagaccttcggcatgcaatg
gctaattgttttgaagcattaataggagctgtttacttggagggaagcctggaggaagcc
aaacagttatttggacgcttactctttaatgatccggacctgcgcgaagtctggctcaat
tatcctctccacccactgcaactacaagagccgaatactgatcgacaacttattgagact
tctccagttctgcagaaacttactgagtttgaagaagcaattggagtaatttttactcat
gttcgacttctggcaagagcattcactttgagaactgtgggatttaaccatctgacccta
ggccacaatcagaggatggaattcctaggtgactccataatgcagctggtagccaccgag
tacttatttattcatttcccagatcatcatgaaggacacttaactttgttgcgaagctct
ttggtgaataacagaactcaagccaaggtagcggaggagctgggcatgcaggagtatgcc
atcacgaatgacaagaccaagagacctgtggctcttaggaccaagaccttggcagacctt
ttggaatcatttattgcagcgctgtacattgataaggatttggaatatgttcacactttc
atgaatgtttgcttcttcccacgattaaaagagtttattttgaatcaggattggaatgac
cccaagtcccagcttcagcaatgttgcttgacactcaggaccgaagggaaggagcccgac
attcctctgtacaagactctgcagactgtaggaccctcccatgctagaacctacactgtg
gcagtgtacttcaagggagaaagaataggctgtgggaaaggaccaagtattcagcaagcg
gaaatgggagcagcaatggatgcactggaaaaatataactttccccagatggcccatcag
aagcggttcattgaacggaagtacagacaagagttaaaagaaatgaggtgggaaagagag
catcaagagaaagagccagatgagactgaagacataaagaaataa
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integrated database retrieval system
