Mirounga leonina (Southern elephant seal): 118006743
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Entry
118006743 CDS
T07472
Name
(RefSeq) pre-mRNA-splicing factor RBM22 isoform X1
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118006743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mlx03041
]
118006743
Spliceosome [BR:
mlx03041
]
Complex B
Other components
Prp19-related factors
118006743
Complex C
118006743
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
zf-CCCH_3
zf-CCCH_10
Motif
Other DBs
NCBI-GeneID:
118006743
NCBI-ProteinID:
XP_034855396
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQN
MEREISNSDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLG
DTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAV
VNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctctctgggttccaacacctacaacaggcagaactgggaggatgcggacttc
cccattctgtgccagacgtgtcttggagaaaacccatatatccgaatgaccaaagaaaag
tatgggaaggaatgtaaaatctgtgccagaccattcacggtgtttcgttggtgccccggg
gtccgcatgcgtttcaagaaaactgaagtgtgccaaacctgcagtaaattgaagaatgtc
tgtcagacctgcctcttggacctggagtacgggctgcccatccaggttcgtgatgcagga
ttgtcttttaaggatgacatgccaaagtcagatgtcaacaaagagtactacacacagaat
atggagagagaaatttctaactctgatggaacgcggccggttggcatgttggggaaagcc
acctccaccagtgacatgttgctcaagctagcccggaccacaccctactataagaggaat
cgaccccacatttgctccttctgggtaaaaggagaatgtaagagaggagaggagtgtcca
tacagacatgagaagccaacagatccagatgacccccttgctgatcagaacattaaagac
cgatattatggtatcaatgaccctgtggcagataagcttctaaagcgggcttcaacaatg
cctcgtctggacccaccagaggacaagactatcaccacactgtatgttggtggtctgggt
gataccattactgagactgatctaagaaatcacttctaccagtttggggaaattcggacg
atcactgtcgtgcaaagacagcagtgtgcattcatccagtttgccacgaggcaggctgca
gaagtggctgcagagaagtcttttaataagttgattgtcaatggccgtagactcaacgtg
aaatggggaaggtcccaagcagccagaggaaaagaaaaagagaaggatggaaccacagac
tctgggatcaagcttgagcccgttccaggactgccaggagctcttcctcctcctcctgca
gcagaagaagaagcctctgccaactacttcaacctccccccgagtggtcctccagctgtg
gtgaacattgcactgccaccaccccctggtattgccccgcccccacccccaggttttggg
ccacacatgttccacccaatgggaccaccccctcctttcatgagggctccaggaccaatc
cactatccttctcaggaccctcagaggatgggcgctcatgccggcaaacacagcagtccc
tag
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