Mirounga leonina (Southern elephant seal): 118006906
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Entry
118006906 CDS
T07472
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118006906 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mlx04131
]
118006906 (VPS8)
Membrane trafficking [BR:
mlx04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
118006906 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
zf-RING_Vps41
TPR_VPS8_2
Beta-prop_WDR36-Utp21_1st
TPR_Vps41
zf_RING_Vps8_fungal
WD40_CDC20-Fz
zf-RING_11
Clathrin
zf-RING_2
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
Beta-prop_WDR3_1st
GED
Beta-prop_WDR5
zf-C3HC4
EIF3I
PHD
Motif
Other DBs
NCBI-GeneID:
118006906
NCBI-ProteinID:
XP_034855632
LinkDB
All DBs
Position
Unknown
AA seq
1427 aa
AA seq
DB search
MENEPDHENVEQSLSAKTTEEELNKSFSLEASLSKFSYIDLDKELEFKNDLIDDKEFDIP
QVDTPPTLESILNETDDEDESFVLEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK
KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFGK
DQNQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDA
HPPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEP
LHSKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVA
VHNYVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTVVLLDS
VEKLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSY
GGQIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDASK
RKAVVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLERKDLLFSQ
MYDKLSENSVAKGVFLECLEPYILSDKLVGMTPQVMKDLIVHFQDKKLMENVEALIVHMD
ITSLDIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFRVIAPPLNAGRTLTDEQVV
MGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASSEEEIYPYVRTL
LHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLAR
QLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMA
EKAEFYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSAEEKQSVWQK
AMDHIEELVSLRPGKAAELVATHFSEQIETVIKKLQNQVLLFKFLRSLLDPREGIHVNQE
LLQMSPCVTEQFIELLCQFSPNQVVETLQVLECYRLEETIQITQKYQLHEVTAYLLEKKG
DIHGAFLIMLQRLQSKLQEITHQDEKTKEELSLKDVEDTMVETIALCQRNSHNLNQQQRE
ALWFPLLEAMMAPQKLSGSAAPHLHPDALKSLTMQVLNSMAAFIALPSILQRILQDPVYG
KGKLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCSI
CLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTIETEGQTRWTCYKCSSSNKVGKLSE
NSSEIKTGKTAPSQVKMSPSCHPSKGDSTVKAASEPVLDPQQIQAFDQLCRLYRGSSRLA
LLTELSQNRSSESYRPFSGSQSGPAFNSVFQNENFQLQLIPPPVTED
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaaccagaccatgaaaacgtggaacagagcctcagtgccaagactactgaa
gaagagctgaataagtctttcagtcttgaagcttcactttcaaaattctcttacatagat
ctggacaaggaactggagttcaaaaatgatctgattgatgacaaagagtttgatattcct
caagttgacactcctccaacactggaaagcatactcaatgaaactgatgatgaagatgag
tcttttgttcttgaggatcctacactgttaaacattgatactattgattctcactcctat
gatacttcgtctgtggcaagttcagatagtggtgacaggaccaacttaaaaaggaagaag
aaattacctgattctttttcactccatgggtcagttatgcgacattcacttttgaaggga
atttctgcccagatagtgtctgcagctgacaaagtggatgctggcttgcctacagcaatt
gcagtgtccagtctgatagctgtgggtacatctcatggattggctttaatatttggaaaa
gatcagaatcaagctttgcgactttgtctgggtagcactagtgttgggggtcagtatgga
gccatctctgccctcagtatcaacaatgactgctcaagacttctctgtggctttgctaaa
ggacagatcacaatgtgggatctggccagtggaaaacttctgagatcaataacagatgct
catcctccaggaacagcaatattgcatattaagtttacagatgacccaactcttgcaatt
tgcaatgacagcggaggctctgtttttgaattgacatttaagagagtgatgggagtgaga
acgtgtgaatctagatgcctgttcagtggttccaagggtgaagtttgctgtattgagcct
ctccattcaaagcctgagttgaaagatcatcccatcacacagttttccttattggccatg
gcatccttaacaaagatactggtcattggattgaaaccatccttgaaagtgtggatgact
tttccctatggacggatggatccttccagtgttccattgctggcctggcactttgtggca
gtgcataattatgtgaatcccatgcttgccttctgcagaggagatgttgttcattttctg
ttggttaagagagatgagtctggagcaatacatgttactaagcaaaagcaccttcacctc
tactatgatctcatcaactttacttggataaactcacgcacagttgtgctcttggacagt
gtggagaagttgcatgtgattgatcggcagactcaagaggaattggaaacagtggagatc
tcagaagttcagttggtctataacagcagtcatttcaaatccctagccaccggaggaaat
gttagccaggcactggctttggttggagagaaggcttgttatcaatccatcagtagctat
ggtggtcaaatcttttatttggggacaaaatctgtttatgtgatgatgctgagaagctgg
agagagagagtggatcatctcctgaaacaagattgtcttacagaagccttggctcttgca
tggtctttccatgaaggaaaagcaaaagcagtagtcggattatccggggatgccagtaag
cgaaaggctgttgttgcagatcgaatggtagaaatcctgttccactatgcagatcgagct
ctgaaaaagtgtccagaccagggaaaaatccaagtgatggagcagcattttcaggacatg
gtgcctgtcatcgttgattactgcctgctgttggagcgaaaggatcttttatttagccag
atgtatgacaaactaagtgagaattcagtggccaaaggagtgtttttggagtgccttgaa
ccatatattttaagtgataaattggtgggaatgaccccccaggtaatgaaagacttgatt
gttcacttccaagataaaaagttaatggaaaatgtggaagccctcattgtacatatggat
atcaccagcctagatattcagcaggtagttctcatgtgttgggaaaatcgtctgtatgat
gctatgatctatgtctacaacagaggcatgaatgaatttataagtccaatggagaaactt
ttcagagtcattgctcctcctctgaatgcaggaaggacgctaacagatgagcaagttgtt
atgggcaacaaacttcttgtatatattagctgttgtcttgcaggccgagcctatcccctt
ggtgacatccctgaagatcttgttcccttggttaaaaaccaggtttttgaatttctgatt
cgcctgcattcagcagaagcttcctcggaggaagaaatctacccgtatgttcggactctg
ctacattttgacacaagagaatttctaaatgtattggcactgacttttgaagattttaaa
aatgacaagcaagctgtagaatatcaacaacgaattgtggatattttgttgaaagttatg
gtggagaattccgattttactccctcacaagtagggtgtctctttacattccttgcccgg
cagcttgcaaagccagacaatacattgtttgtaaacagaaccctttttgatcaggtcctt
gaattcctctgtagtcctgatgatgactcccgacactctgaaagacagcaggtcctttta
gaattgctgcaggctggaggcatagttcagtttgaagagagtcggctcatccggatggca
gaaaaagcagaattctatcaaatttgcgagtttatgtatgaacgagaacaccaatatgac
aaaataattgattgctacttacgtgacccgctaagggaggaagaagtctttaactacatt
cacaatatcttatccattcctggacacagtgcagaggagaagcagtctgtatggcagaaa
gcaatggatcatatagaggaacttgtatccctgaggccaggtaaagctgcagagctggtt
gctactcacttttctgaacagattgaaacagtcattaaaaaacttcagaaccaggttttg
cttttcaaatttttgaggagtcttcttgacccaagggaaggtattcatgtaaatcaagaa
ttgctgcagatgtctccctgtgttacggagcagttcattgagctgttgtgtcagttcagc
ccaaaccaggttgtagagacactgcaggtccttgagtgctaccgcctggaagaaaccatc
cagattacccagaagtatcaacttcatgaagtcactgcctatctattagaaaaaaaagga
gatattcatggtgccttcttaataatgttacagagactacaaagcaaacttcaagagata
acacatcaagatgaaaagaccaaagaggagctctcattgaaggatgttgaagataccatg
gtagagacaattgccctttgccagagaaattcacataatttgaaccagcagcaacgagag
gccctttggtttccattgttggaggcaatgatggcccctcagaagctgtctggttcagct
gcacctcatctacaccctgacgctctgaaatctttgaccatgcaagttctaaacagcatg
gctgcatttattgccctcccatcaatcttgcaaagaatcttacaggatccagtttatgga
aaaggaaaacttggagaaatccagggacttattctgggaatgttggatacctttaactat
gaacaaaccctgctggaaacaactactagccttctaaaccaagatctccattggtcattg
tgtaacctgagagcttcagtcaccagaggactgaatcccaagcaggattactgctctata
tgtttgcagcagtacaagagacgccaagaaatggctgatgaaatcattgtctttagctgt
ggccatttgtatcactcattctgtctgcaaaataaagagtgcaccatagagactgagggg
cagacgagatggacatgctacaaatgcagctcaagtaacaaagtggggaaattaagtgaa
aattcatctgaaattaaaacgggaaagacagccccatcccaggtaaaaatgtctccttct
tgtcatccatccaaaggagattctactgttaaggcagcctcggaacccgtcctggacccg
cagcaaatccaggcctttgatcagctttgccgtctctaccgaggaagctcccggctggct
ctcctcacagagctctcccagaatcgcagcagtgagagctacaggccattcagtggctcc
cagagtggccctgctttcaacagcgtcttccagaatgagaatttccagctgcagctcatt
cccccacctgtgactgaggactga
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integrated database retrieval system
