Mirounga leonina (Southern elephant seal): 118006924
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Entry
118006924 CDS
T07472
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03030
DNA replication
mlx03410
Base excision repair
mlx03420
Nucleotide excision repair
mlx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118006924 (RFC4)
03410 Base excision repair
118006924 (RFC4)
03420 Nucleotide excision repair
118006924 (RFC4)
03430 Mismatch repair
118006924 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlx03032
]
118006924 (RFC4)
03036 Chromosome and associated proteins [BR:
mlx03036
]
118006924 (RFC4)
03400 DNA repair and recombination proteins [BR:
mlx03400
]
118006924 (RFC4)
DNA replication proteins [BR:
mlx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
118006924 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
118006924 (RFC4)
Chromosome and associated proteins [BR:
mlx03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
118006924 (RFC4)
DNA repair and recombination proteins [BR:
mlx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
118006924 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
118006924 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
AAA_16
DUF815
AAA_22
AAA_30
AAA_11
AAA_24
Mg_chelatase
AAA_28
RuvB_N
SLFN-g3_helicase
AAA_19
AAA_5
ResIII
UPF0176_N
AAA_7
Motif
Other DBs
NCBI-GeneID:
118006924
NCBI-ProteinID:
XP_034855672
LinkDB
All DBs
Position
Unknown
AA seq
363 aa
AA seq
DB search
MQAFLKGTSVSTKPSLKDRGVAATAGSSGENKKTRPVPWVEKYRPKCVDEVAFQEEVVAV
LKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVRE
KVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICN
YVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIADKEHVRISNEGIACLVKVSEGDLRKA
ITFLQSATRLTGGKEITEKVITDIAGVIPAGTIDGIFAACQSGSFDKLEAVVKDLIDEGH
AATQLVNQFHDVVVENDNLSDKQKSIITEKLAEVDKCLADGADEHLQLISLCAMVMQQLT
QNC
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcttttctaaaaggcacatctgtcagtactaaaccgtcactgaaggatcgagga
gtagctgccacagctggaagcagtggagagaacaagaaaaccagacctgttccatgggtg
gaaaaatatcgcccaaaatgtgtggatgaagttgctttccaggaagaagtagttgcagtg
ctgaaaaagtctttagaaggtgctgatctccctaatctcttgttttatgggccacctgga
actggaaaaacatccaccattttggcagcagctagggagctttttgggcctgaacttttt
cgattaagagttcttgagttaaatgcatccgatgaacgtggaatacaagtagttagagaa
aaagtgaagaattttgctcaattaactgtgtcaggaagtcgttcagatgggaagccatgt
cctccttttaagattgtgattctggatgaggcagattctatgacctcagctgctcaggca
gctttacgacgtaccatggagaaggagtctaaaaccacacgattctgtctcatctgtaac
tatgtcagtcgaataattgaacctctgacgtctagatgttctaaattccgattcaaacca
ctgtcagataaaattcaacagcagcgattactagacattgctgataaagaacatgtcaga
attagcaatgagggaatagcttgtcttgttaaagtgtcagaaggagatttaagaaaggcc
attacatttcttcaaagtgctacccgattaacaggtggaaaggagatcacagagaaggtg
atcacagacattgctggggtaataccagctgggacaattgatggaatatttgctgcgtgt
cagagtggctcttttgataaactagaagctgtggtaaaagacttaattgatgagggccat
gcagcaactcagcttgtaaatcaatttcatgatgtggtcgtagaaaatgataacctttct
gataaacagaaatccattatcacagaaaaacttgctgaagtagataaatgcttagcagat
ggtgctgatgaacatctacaactcatcagcctctgtgcgatggtgatgcagcagttaact
cagaattgctga
DBGET
integrated database retrieval system
