Mirounga leonina (Southern elephant seal): 118007603
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Entry
118007603 CDS
T07472
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mlx03041
]
118007603 (DDX1)
03016 Transfer RNA biogenesis [BR:
mlx03016
]
118007603 (DDX1)
Enzymes [BR:
mlx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118007603 (DDX1)
Spliceosome [BR:
mlx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
118007603 (DDX1)
Transfer RNA biogenesis [BR:
mlx03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
118007603 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Paramyxo_PNT
DUF5766
Motif
Other DBs
NCBI-GeneID:
118007603
NCBI-ProteinID:
XP_034856509
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGLTKGKHYYEVSCHDQGLCRVGWSSMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHLKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVALSKASDSYVVKSQHTGNAQVAQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRIHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKNHIRTDDVHAKDNTRPGAN
SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPLDEFDGKVTYGQRRAAGGGNYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttttctgagatgggtgttatgcctgagattgctcaagctgtagaagagatg
gattggcttctcccaactgatatccaggctgaatctatcccactgatcctaggaggcggt
gatgtacttatggctgcggaaacaggaagtggaaaaactggtgcttttagtattccagtt
atccagatagtttatgaaactctgaaagaccaacaggaaggcaaaaaaggaaaaacaaca
attaaaactggtgcttcagtgctcaacaaatggcaaatgaacccatatgatagaggatct
gcttttgcaattgggtctgatggtctttgttgtcaaagcagagaagtgaaggagtggcat
ggatgcagagctactaaaggattaacgaaagggaagcactactatgaagtatcctgtcat
gaccaaggattatgcagagttgggtggtcttccatgcaggcttccttagacctaggtact
gacaagttcggatttggctttggtggaacaggaaagaaatcccataataaacaatttgat
aattatggagaggaattcactatgcatgataccattggatgttaccttgatatagataaa
gggcatctcaaattctccaaaaatggaaaagaccttggtctggcatttgaaataccacca
catatgaagaaccaagccctctttcctgcttgtgttttaaagaatgccgaactaaaattt
aactttggtgaagaagaatttaagtttccaccaaaagatggttttgttgctctttccaag
gcatcggatagttatgttgttaaatcacagcacacaggcaatgcacaagtggcacaaacg
aagtttctccccaatgctccaaaagctctcatcgtcgagccctcccgggagttagctgaa
caaactttgaataacgtcaagcagtttaagaaatatattgataatcctaaattaagggag
cttctgataattggaggtgttgcagcgcgggatcagctctctgttttggataatggggta
gatatagtcgttggcactccaggaagactagatgatttggtgtcaactggaaaactgaac
ttatcccaagttagattcctggtcctggatgaagctgatgggcttctttctcaaggttac
tctgattttataaataggattcacaatcagattcctcagattacctctgatgggaaaaga
cttcaggtgattgtttgctctgctactttgcattcttttgatgtgaagaagctgtctgag
aagataatgcattttcccacatgggttgatttaaaaggagaagactccgttccggacact
gtacaccatgttgttgtcccagtgaatcccaaaactgacagactctgggaaaggcttggg
aaaaaccacattagaactgatgatgtacatgcaaaagataacacaagacctggtgctaac
agtccggagatgtggtctgaagctattaaaatcctgaagggggagtatgctgtccgggca
atcaaggaacacaagatggatcaagcaattattttctgtagaaccaaaattgactgtgac
aacttggagcaatattttatgcaacaaggaggaggacctgataaaaaaggacaccagttc
tcatgtgtttgtcttcatggggacagaaagcctcatgaaaggaagcaaaacttggaaaga
tttaagaaaggagatgtaagattcttgatttgcacagatgtagccgccagaggaattgat
atccatggtgttccttatgttataaacgtcaccttgcctgatgaaaagcaaaactatgta
catcgaattggcagagtaggaagagctgaaaggatgggtctggccatttccctggtggca
acagagaaagaaaaggtttggtaccacgtatgtagcagccgtggaaaaggatgttataac
acaagactcaaggaagatggtggatgcaccatatggtacaatgagatgcagttgctctct
gagatagaagagcatctgaattgcaccatttctcaggttgaaccagatataaaggtacca
ttggatgaatttgatgggaaagtcacctatggtcagagaagggccgctggtggtggaaac
tataaaggccatgtggatattttggcacctacggttcaagagttggctgcccttgaaaag
gaggcgcagacatctttcctgcatcttggctaccttcctaaccagctgttcagaaccttc
tga
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