KEGG   Mirounga leonina (Southern elephant seal): 118007626
Entry
118007626         CDS       T07472                                 
Symbol
SDC1
Name
(RefSeq) syndecan-1
  KO
K06257  syndecan 1
Organism
mlx  Mirounga leonina (Southern elephant seal)
Pathway
mlx04512  ECM-receptor interaction
mlx04514  Cell adhesion molecule (CAM) interaction
mlx04820  Cytoskeleton in muscle cells
mlx05144  Malaria
mlx05205  Proteoglycans in cancer
mlx05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:mlx00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    118007626 (SDC1)
   04514 Cell adhesion molecule (CAM) interaction
    118007626 (SDC1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    118007626 (SDC1)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    118007626 (SDC1)
  09174 Infectious disease: parasitic
   05144 Malaria
    118007626 (SDC1)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    118007626 (SDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mlx04131]
    118007626 (SDC1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:mlx04090]
    118007626 (SDC1)
   00535 Proteoglycans [BR:mlx00535]
    118007626 (SDC1)
Membrane trafficking [BR:mlx04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    118007626 (SDC1)
CD molecules [BR:mlx04090]
 Proteins
  118007626 (SDC1)
Proteoglycans [BR:mlx00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   118007626 (SDC1)
SSDB
Motif
Pfam: Syndecan
Other DBs
NCBI-GeneID: 118007626
NCBI-ProteinID: XP_034856539
LinkDB
Position
Unknown
AA seq 307 aa
MRRAALWLWLCALALRLQPALPQIVATNVPPEDQDASGDDSDNFSGSGAGALQDITLSQQ
TPSTWKDVALLTAVPTAPEPTGRGHTTTSTFDLPTGEAPGEGEAVLVAEVEPGFTDQEKE
ATRPPSETTPHPATHRPSTARATTAQGPATSHPHRDMQPEHQEPSASAGPSQLDPHTPSV
EDRGPSATERATEDGVSTQLPVGEGSGEQDFTFDLSGENMAGTAVEPDQRNQPPVDHEAS
QGLLDRKEVLGGVIAGGLMGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGAYQKPS
KQEEFYA
NT seq 924 nt   +upstreamnt  +downstreamnt
atgaggcgcgcggcgctctggctctggctctgcgcgctggcgctgcgcctgcagccggct
ctcccgcaaattgtggccaccaatgtgccccctgaagatcaggatgcctctggggatgac
tctgacaacttctctggctccggtgcaggtgctctgcaagatatcaccttgtcacagcag
accccgtccacctggaaggacgtggcgcttctgacggccgtgcccacagctccagagccc
accggcagaggccacaccaccacctccacctttgacctgcccacgggagaggcgcctggg
gagggagaggcggtgctcgtggccgaggtggagcctggcttcaccgaccaggagaaggag
gccacccgcccacccagtgagaccacgccgcacccagccactcaccggccatcgacagca
agagccaccacggcccagggcccggccacctcccatccccacagggacatgcagcctgag
caccaggagccctcggcttcggcgggacccagccagctggaccctcacactcccagtgtg
gaggacagaggtccttctgccaccgagagggccacggaggatggagtctccactcagctc
ccagtaggggagggctctggggagcaggacttcaccttcgacctgtctggggagaacatg
gccgggacggcggtggagcctgaccagcggaatcagcccccagtggaccacgaggcctca
cagggcctcctggacaggaaggaagtgctgggaggggtcatcgctggaggcctcatgggg
ctcatcttcgccgtgtgcctggtgggtttcatgctgtaccggatgaagaagaaggacgag
ggcagctactccttggaggagccaaaacaagccaatggtggagcctaccagaagcccagc
aagcaggaggagttctacgcttga

DBGET integrated database retrieval system