Mirounga leonina (Southern elephant seal): 118008007
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Entry
118008007 CDS
T07472
Symbol
PCBP1
Name
(RefSeq) poly(rC)-binding protein 1
KO
K12889
poly(rC)-binding protein 1
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03040
Spliceosome
mlx04216
Ferroptosis
mlx04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118008007 (PCBP1)
09140 Cellular Processes
09143 Cell growth and death
04216 Ferroptosis
118008007 (PCBP1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
118008007 (PCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlx03019
]
118008007 (PCBP1)
03041 Spliceosome [BR:
mlx03041
]
118008007 (PCBP1)
Messenger RNA biogenesis [BR:
mlx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
118008007 (PCBP1)
Spliceosome [BR:
mlx03041
]
Common components
Common spliceosomal components
hnRNP proteins
118008007 (PCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
MOEP19
Bac_chlorC
Motif
Other DBs
NCBI-GeneID:
118008007
NCBI-ProteinID:
XP_034857267
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MDAGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIIT
LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKI
KEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMT
IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQ
VARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGA
NINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSEKGMGCS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggatgccggtgtgactgaaagtggactaaatgtgactctcaccattcggctgcttatg
cacggaaaggaagtaggaagcatcattgggaagaaaggggagtcggttaagaggatccgc
gaggagagtggcgcgcggatcaacatctcggaggggaattgcccggagagaatcatcact
ctgaccggccctaccaatgccatctttaaggccttcgctatgatcatcgacaagctggaa
gaagatatcaacagctccatgaccaacagcacggcggccagcaggcccccggtcaccctg
aggctggtggtgccggccacccagtgcggctccctgattgggaaaggcgggtgtaagatc
aaagagatccgcgagagtacgggggcccaagtccaggtggcgggggatatgctgcccaac
tccaccgagcgggccatcaccattgctggcgtgccgcagtctgtcaccgagtgtgtcaag
cagatctgcctggtcatgctggagacgctctcccagtctccgcaagggagagtcatgacc
attccgtaccagcccatgccggccagctctccagtcatctgcgcgggcggccaagatcgg
tgcagcgacgctgcgggctacccccatgccactcatgacctggagggaccacctctagat
gcctactcgattcaaggacaacacaccatttctccgctcgatctggccaagctgaaccag
gtggcaagacaacagtctcactttgccatgatgcacggcgggaccggattcgccggaatt
gactccagctctccagaggtgaaaggctattgggcaagtttggatgcatctactcaaacc
acccatgaactcaccattccaaataacttaattggctgcataatcgggcgccaaggcgcc
aacattaatgagatccgccagatgtccggggcccagatcaaaattgccaatccagtggaa
ggctcctctggtaggcaggttactatcactggttctgctgccagtattagtctggcccaa
tatctaatcaatgccaggctttcctccgagaagggtatggggtgcagctag
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