Mirounga leonina (Southern elephant seal): 118008111
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Entry
118008111 CDS
T07472
Symbol
CCDC88A
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
mlx
Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mlx03037
]
118008111 (CCDC88A)
Cilium and associated proteins [BR:
mlx03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
118008111 (CCDC88A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
APG6_N
Motif
Other DBs
NCBI-GeneID:
118008111
NCBI-ProteinID:
XP_034857419
LinkDB
All DBs
Position
Unknown
AA seq
1874 aa
AA seq
DB search
MENEIFTPLLEQFMTSPLVTWVKTFGPLAAGNGTNLDEYVALVDGVFLNQVMLQINPKSE
SQRVNKKVNNDASLRIHNLSILVRQIKFYYQETLQQLIMMSLPNVLIIGKNPFSEQGTEE
VKKLLLLLLGCAVQCQKKEEFIERIQGLDFDTKAAVAAHIQEVTHNQENVFDLQWMEVTD
MSQEEIEPLLKNMALHLKRLIDERDEQSETIIELSEERDGLHFLPHASSSAQSPCGSPGM
KRTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQMEIELKRLQQENMNLLS
DARSARMYRDELDALREKAIRVDKLESEVSRYKERLHDIEFYKARVEELKEDNQVLLETK
TMLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQK
QSMDESLHLGWELEQISRTSELSEAPQKSLGHEVNELTSSRLLKLEMENQSLTKTVEELR
SSMDSAEGNTSKILKIEKENQRLSKKVEILENEIIQEKQSLQNCQNLSKDLMKEKAQLEK
TIETLRENSERQIKILEQENEHLNQTVSSLRQRSQISAEARVKDIEKENKILHESIKETS
SKLSKIEFEKRQIRKELEHYKEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEA
LEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNVESLKCASMKM
AQLQLENKELESEKEQLKKGLELMKASFKKTERLEVSYQGLDTENQRLQKALENSNKKIQ
QLESELQDLEVENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKENKR
LRQQAEIKDTTLEENNVKIGNLEKENKTLFKEISIYKESCIRLKELEKENKELVKRATID
IKTLVTLREDLVSEKLKTQQMNNDLEKLTHELEKIGLNKERLLHDEQSTDDSRYKLLESK
LESTLKKSLEIKEEKIAALEARLEESTNYNQQLRQELKTVKKNYEALKQRQDEERMVQSS
PPTSGEDNKWERESQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNSNLQ
AQILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSSLENENE
AVIKEREDLKSLYDSLIKDHEKLELLHERQASEYESLIAKHGTLKSAHKNLEVEHKDLED
RYNQLLKRKGQLEDLEKTLKLEQEKMLLENKNHETIAAEYKKLCGENDRLNHTYNQLVKE
TEVLQTDHKNLKSLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKGNL
EEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQ
YKFYDPSPPRRRGNWITLKMRKLIKSKKDINRERQKSLTLTPTRSDSSEGFLQLPHQDSQ
DSSSVGSNSLEDGQTLGTKKSSMVALKRLPFLRNRPKDKDKMKACYRRSMSMNDLVQSMV
LAGGQWTGSTENLEVPDDISTGKRRKELGAMAFSTTAINFSTVNSSTGFRSKQLVNNKDT
TSFEDISPQGISDDSSTGSRVHASRPASLDSGRTSTSNSNNNASLHEVKAGAVNIQSRPQ
SHSSGEFSLLHDHETWSSSGSSPIQYLKRQTRSSPMLQHKMPDSLESRAHHKIKTGSPGS
EVVTLQQFLEESNKLTSIQIKSSSQENLLDEVMKSLSVSSDFLGKNKPVSCGLARSVSGK
TPGDFYDRRTSKPEQFVRPSPRKTEDAYFISSPGKPTLGAQRKIKLVKETSLSRQSKDSN
PYATLPRASSVISTAEGTTRRTSIHDFLTKDSRLPMSVDSPPATADSSITATSNVDKVQE
SRNSKSRSREQQSS
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgagatttttactccccttctggagcagtttatgaccagccccttggtcact
tgggttaaaacgtttggacctctggctgcaggaaatgggaccaacctggatgaatatgtg
gctttggtggatggggtattcttgaaccaggtcatgctccaaattaatcctaaatcggag
agtcagagagtaaataaaaaagtcaacaatgatgcctcacttagaattcataatctttcc
attttggtgagacagataaaattttattaccaggagactttgcagcaattgatcatgatg
tccttgccaaatgtcttaatcattggcaaaaatcctttttctgaacaaggcacagaagaa
gttaaaaagttgcttttacttttactgggttgtgcagttcagtgtcagaaaaaagaagaa
tttattgaaagaattcaaggtttagattttgatacaaaagcagcagttgcagcacatatt
caagaggtaacccataatcaggaaaatgtgtttgatctgcaatggatggaagtgactgat
atgtctcaagaggaaatagaaccactcttgaaaaatatggcattacatctaaaaagactt
atagatgagagagatgaacaatcagagactatcatagaactctctgaagaacgggatggt
cttcattttttaccccatgcctcttcatctgcgcagtcaccctgtggttctccaggcatg
aagcgaacagaaagtcgacagcatctgtccgtggaactggcagatgctaaggcaaaaata
agaaggcttaggcaggaattggaggaaaagactgaacagttgttggactgtaaacaagaa
cttgagcaaatggaaatagaactaaaaaggctgcaacaagagaacatgaatttgctttcg
gatgctcgttctgctagaatgtaccgagatgaattagatgcacttcgagaaaaagctatc
agagtggataagcttgaaagtgaagtcagcagatataaagaaagactacatgatattgaa
ttttataaggcaagagttgaggaattaaaagaagacaatcaagttttattagaaacaaaa
accatgttggaagatcaattagaaggaactagagctcgttctgataaattacatgaatta
gaaaaagagaatttacaactaaaggctaaactgcatgatatggaaatggaacgtgatatg
gatagaaaaaaaatcgaagaattaatggaagaaaatatgaccttggaaatggcacagaaa
caaagtatggatgaatcattacatcttggctgggagttggaacaaatatccagaactagc
gaactttctgaagcaccacaaaaatccttgggccatgaggtgaatgagttaacatcaagc
aggttattgaaattggagatggaaaaccagagtctgacaaaaactgtagaagaacttcgg
agtagtatggattctgcagaaggcaacacttccaaaatcctgaaaattgaaaaagaaaat
caaagactaagtaaaaaggttgaaattcttgaaaatgaaattattcaagaaaagcaaagt
cttcagaactgtcagaatttaagcaaggatctaatgaaggagaaagctcagcttgaaaaa
acaattgaaacacttagagaaaattcagagagacagattaaaatattggaacaggaaaat
gaacatctgaatcaaactgtgtcttccttaaggcagcgctcccagataagtgctgaagca
agggtgaaagatattgaaaaagaaaataaaattctccatgagtcgatcaaagaaacaagt
agcaagctaagcaagattgagtttgaaaaaagacaaattagaaaagaattggaacattat
aaagaaaaaggagaacgagcagaagaacttgaaaatgagttgcatcatcttgagaaagaa
aatgaattgttacagaaaaagataaccaatttaaaaattacttgtgaaaaaattgaggcc
ttagaacaagaaaattcagagctggaaagagaaaataggaaattaaaaaaaacattggat
agctttaaaaaccttacttttcagttagaatccctagaaaaagagaattcccaactagat
gaggaaaacttagaactgcgaaggaatgtggaatctttgaagtgtgcaagcatgaaaatg
gctcagctacaactagaaaataaagaactggaaagtgaaaaagagcaacttaagaagggt
ttggaactcatgaaagcatctttcaagaagacagaacgcttagaagttagctaccaaggt
ttagatacagaaaatcaaaggctacagaaagctctagagaacagcaataaaaagattcaa
caattagagagtgaactacaagacttagaggtagaaaatcaaacattgcagaaaaaccta
gaagagttaaaaatatctagcaaaagactagaacagctagaaaaagaaaataaatcatta
gagcaagaaacttctcaactggaaaaggataagaaacaactggagaaggaaaataaaaga
ctccgacaacaagcagaaataaaagataccacattagaagaaaataatgtgaaaattgga
aatttagaaaaagaaaacaaaactcttttcaaagagatcagtatttataaagaatcctgc
attcgtctgaaagaattagagaaagaaaataaggagcttgtgaaaagagcaactattgat
ataaaaactttggttacattacgagaggatttggtaagtgaaaaattgaagactcaacaa
atgaataatgatcttgaaaaattaactcatgagcttgagaagatagggttaaataaagag
cgactcttacatgatgagcaaagtactgatgacagtaggtacaaacttttggaatcaaaa
ttagaatccactctaaagaagtcccttgaaataaaagaagaaaaaattgctgctttagaa
gctcgattagaagaatccacaaattataaccagcagttgcgccaagaacttaaaacagtg
aaaaagaattatgaagctctcaaacagagacaagatgaagaaaggatggtacagagctct
cctccaacttctggtgaagataataaatgggagcgagaaagtcaagaaacaactagagag
cttttgaaagttaaagacagattaattgaagtagaaagaaataatgctaccctgcaagca
gagaaacaagcactgaaaactcaactgaaacaattggagacacagaacagtaatttgcag
gctcagattcttgcacttcagaggcagacagtttcattacaggagcagaatactactctt
caaacccagaatgcaaagcttcaggttgaaaattctacccttaattcccaaagtacttca
cttatgaaccagaatgcacaactcctaatccagcagtcttccttagaaaatgaaaatgaa
gctgtaatcaaagagcgagaagacctgaaatctctctatgattctttgatcaaagatcat
gaaaagctggaacttcttcatgaacgtcaggcttcagagtatgagtctctcatcgctaaa
catggaactctaaagtctgcccacaaaaatcttgaggtggaacataaagaccttgaagat
cgttacaatcagttactaaaacggaaaggacaattggaagatttggaaaaaacactgaaa
ttagaacaggaaaaaatgctgcttgaaaacaaaaaccatgagactatagctgcagaatac
aagaaactttgtggtgaaaatgataggttgaatcatacatataatcagcttgtaaaagaa
actgaagttttacaaactgaccacaaaaacttgaaaagtcttctaaataattccaaattg
gaacaaacaagattagaagctgaattttcaaagctaaaggaacaataccaacagttggac
atcacatccaccaagctaaataaccagtgtgagttgctaagccaacttaaaggaaattta
gaagaagaaaatcgacatctactagatcaaattcagacattaatgctacagaacagaaca
ctattggagcagaatatggaaagcaaggatctctttcatgttgaacaaagacagtacatt
gataagttaaatgaattaagacgacaaaaggagaaattagaagagaagataatggatcag
tacaaattttatgacccatctcctcctagaaggagaggcaactggattactctaaaaatg
agaaaattgattaagtctaagaaagatattaatcgggaacgtcagaaatctctaacatta
acacctacccgctcagactccagtgaaggatttcttcagctcccccatcaagatagtcaa
gatagttcttcagtaggttcaaactctttagaagatggccaaactttggggaccaagaaa
agcagcatggttgcactgaaaagactgccctttttgaggaacagaccgaaggataaagac
aaaatgaaggcctgctaccgtcgttccatgtccatgaatgacctggtgcagtccatggtc
ctagcaggaggacagtggacaggtagtactgagaatttggaggttcctgatgatatttca
acgggtaaaaggagaaaagaattgggagctatggccttctctactacagccatcaacttt
tcaactgtcaactcttctacaggcttcagatccaagcagttggttaataataaagatact
acatcctttgaagacataagtccacaaggtattagtgatgattctagtacgggatcaaga
gttcatgcttcaagaccagccagccttgatagtggcagaacatccactagcaatagtaat
aataatgcttcactccatgaagtcaaagcaggtgcagttaatatccaaagcaggccacag
agccacagcagtggagaatttagcctgcttcatgatcatgagacttggtccagcagtggt
agcagtccaattcagtatttgaaaagacagaccagatcaagtccaatgctccagcacaaa
atgcctgattcgttagagagtcgagcacatcacaagatcaaaactggttcccctggaagt
gaagttgttactctacaacagtttttggaagaaagcaacaagcttacctcaatacagata
aagtcctcaagtcaagagaatcttttagatgaagtaatgaaaagtttgtctgtttcttct
gactttctgggaaaaaacaaaccagttagctgtggtctggccaggtcagtaagtggaaaa
accccaggagacttctacgatagacggacaagtaagcctgaacaatttgtgagacccagt
cctcgaaagactgaagatgcctacttcattagctctccaggaaaacctacactaggcgct
caaagaaagataaaattagtaaaagaaacttctctgtcacgacaatcaaaagatagtaat
ccttacgccactttacctcgtgcaagcagtgtgatctctactgccgaaggaactactcga
aggacaagcatccatgattttttgaccaaggacagtagactacctatgtcagttgattca
ccaccagctactgctgatagcagcatcactgcaacatctaatgtggacaaagtacaagaa
agcagaaattcaaaaagcaggtctagggagcaacaaagctcctaa
DBGET
integrated database retrieval system
