KEGG   Mirounga leonina (Southern elephant seal): 118008509
Entry
118008509         CDS       T07472                                 
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain
  KO
K19719  collagen type II alpha
Organism
mlx  Mirounga leonina (Southern elephant seal)
Pathway
mlx04151  PI3K-Akt signaling pathway
mlx04510  Focal adhesion
mlx04512  ECM-receptor interaction
mlx04518  Integrin signaling
mlx04974  Protein digestion and absorption
mlx05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:mlx00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    118008509 (COL2A1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    118008509 (COL2A1)
   04518 Integrin signaling
    118008509 (COL2A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    118008509 (COL2A1)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    118008509 (COL2A1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    118008509 (COL2A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:mlx00536]
    118008509 (COL2A1)
Glycosaminoglycan binding proteins [BR:mlx00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   118008509 (COL2A1)
SSDB
Motif
Pfam: Collagen COLFI VWC VWC2L_2nd
Other DBs
NCBI-GeneID: 118008509
NCBI-ProteinID: XP_034857943
LinkDB
Position
Unknown
AA seq 1487 aa
MIRFGAPQTLVLLTLLVAAVLRCHGQDVQKAGSCVQDGQRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDMKDCLSPETPFGECCPICSTDLATASGQPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPPGKPGDDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQG
APGPAGEEGKRGARGEPGGAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG
PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRG
LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPG
EDGPSGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGAPGSPGPAG
PTGKQGDRGEAGAQGPMGPAGPAGARGIPGPQGPRGDKGEAGEAGERGLKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG
PPGNPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPLQYMRADQAASDLRQHDAEVDATLK
SLNNQIESLRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPANVPKKNWWSSKSKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRL
LSTEGSQNITYHCKDSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTK
HTGKWGKTLIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq 4464 nt   +upstreamnt  +downstreamnt
atgatccgcttcggggctccccagacgctggtgctgctgacgctgctcgtcgccgctgtc
cttcgatgtcacggccaggatgtccagaaggccggcagctgtgtgcaggatgggcagagg
tataatgataaggatgtgtggaagcccgagccctgccggatctgtgtctgtgacactggg
accgtgctctgtgacgacataatctgtgaagacatgaaagactgcctcagccccgagacc
cccttcggagagtgctgccccatctgctcaactgacctcgccacggccagtgggcaacca
ggaccaaagggacagaaaggagaacctggagacatcaaggatattgtaggacctaaagga
cctcctgggcctcagggaccagcaggtgaacaaggacccagaggtgatcgtggtgacaaa
ggtgaaaaaggtgcccctggacctcgtggcagagatggagagcctgggacccctggaaat
cctggcccccctggtcctcctggcccccctggtccccctggccttggtggaaactttgct
gcccagatggctggaggatttgacgagaaggctggtggcgcccagatgggagtgatgcaa
gggccgatgggcccaatgggacctcgaggacctccaggccctgctggtgctcccggacct
caaggatttcagggcaaccctggtgaacccggagaacccggtgtctccggtcccatgggt
ccccgtggtcctcctggcccccctggaaaacctggtgatgatggcgaagctggaaagcct
ggaaaatctggtgaaagaggcccccctggccctcagggtgctcgaggcttcccgggaacc
ccaggccttcctggtgtcaagggtcacagaggctacccaggtctagatggtgctaaggga
gaagctggtgctccaggtgtgaagggagagagtggttcaccgggtgagaatggttctcca
ggcccaatgggtccccgcggcctgcccggtgagcgaggacggactggccctgctggtgct
gcaggtgcccggggcaacgacggccaaccaggccccgcaggccctccgggtcccgtgggt
cccgctggcggtcctggcttccctggtgctcccggggccaagggtgaagctggccccact
ggtgctcgcggtcccgagggcgctcaaggtcctcgcggcgaacctggtactcctgggtcc
cccgggccggctggtgcctctggtaaccccggaactgatggaattcctggagccaaagga
tctgctggtgctcctggcattgctggtgcccccggcttccctgggccccgtggtccacct
ggccctcaaggtgcaactgggcctctgggcccgaaaggtcagacgggcgagcctggtatt
gctggcttcaaaggtgaacaaggccccaaaggagaacctggccctgctggcccccaagga
gcccctggtcctgctggtgaagaaggcaaaagaggtgcccgtggagagcctggtggtgct
gggcccgtcggtccccctggagagagaggtgctcctggcaaccgtggtttcccaggtcag
gatggtctagcaggtccaaagggagcccctggagagcgagggcccagcggccttgctggt
cccaaaggagccaacggtgaccctggccgtcctggagagcctggccttcctggagcccgg
ggtctcactggtcgccctggtgatgctggtcctcaaggcaaagttggtccttctggagcc
cccggtgaagatggccgccctggtcctccaggtcctcagggtgctcgtgggcagcctggc
gttatgggtttccctggccccaaaggtgccaatggtgagcctggcaaggccggggagaag
ggactgcctggtgctcctggcctgagaggtcttcctggcaaagatggtgagacaggtgct
gcaggaccccccggaccagctggacctgctggtgaacgaggcgaacagggtgctcctggg
ccatctgggttccagggacttcctggccctcctggtcccccaggtgaaggtggaaaacca
ggtgaccagggtgtccccggtgaggctggagcccccggcctcgtgggtcccaggggcgaa
cgaggtttcccaggagaacgtggctctcccggggcccagggcctccagggtccccgtggc
ctccccggcactcctggcacggatggtcccaaaggcgcatctggcccggctggcccccct
ggggctcagggccctccaggtctgcagggcatgcccggagagaggggagcggcgggcatc
gcggggcccaagggagacaggggtgatgttggcgagaaaggccctgagggagcgcccggg
aaggacggtggacgaggcctgactggtcccattggcccccctgggcccgctggtgccaac
ggtgagaagggagaagttggccctcccggtcctgcaggaactgctggtgctcgcggcgcc
ccaggtgaacgcggagagactggaccccctgggcccgctggatttgcagggcctcccggt
gctgatggccagccaggtgccaagggcgagcaaggagaggctggccagaaaggtgatgct
ggtgccccaggtcctcagggcccctctggagctcctgggcctcagggtcctactggtgtg
actggtcctaaaggagcccgaggtgctcaaggccccccgggagccactggattccctgga
gctgctggccgcgtcggacccccaggctccaatggaaaccctgggcccccggggccccct
ggtccttctggaaaagatggtcccaaaggtgctcgaggagacagtggcccccctggccgt
gccggtgaccccggtctccaaggtcctgccggaccccccggcgagaagggggagcctgga
gaggacggaccctctggccctgatggtcccccaggtccccaaggtctggctggtcagagg
ggcatcgtcggtctacctgggcagcgtggtgagagaggatttcctggcttgccgggccca
tcgggtgagcccggcaagcagggagctcctggtgcatctggagaccgaggtcctcccggc
cccgtgggtcctcctggcctgaccggtcctgctggcgaacctggacgagagggaagccct
ggtgctgacggcccccctggcagagatggtgcggctggagtcaagggtgatcgtggtgag
actggtgccgtgggcgcccccggagcccccggggcccctggctctcccggccccgctggc
ccgactggaaagcagggagaccgaggagaagctggtgcacaaggccccatgggtcccgca
ggaccggcaggagcccggggaatcccaggccctcaaggcccccggggtgacaaaggagaa
gctggggaagctggcgagaggggactgaagggacaccgtggcttcaccggtctgcagggt
ctgcctggccctcctggtccttctggagaccaaggtgcttctggtcctgctggtccttct
ggccctagaggtcctcctggccctgttggtccctccggcaaagatggtgctaacggaatc
cctggccccattggaccccctggtccccgtggacgttcaggcgaaactggccctgcgggc
cctcctggaaaccctggaccccctggccctccaggtccccctggccctggcatcgacatg
tctgcttttgctggcctcggtcagagagagaagggccccgaccccctgcagtacatgcgg
gctgaccaggcagccagcgacctgagacagcatgatgccgaggtggacgccaccctcaag
tccctcaacaaccagatcgagagcctccgcagccccgagggctcacgcaagaaccctgct
cgcacttgccgggacctgaaactctgccaccctgaatggaagagcggagactactggatt
gaccccaaccagggctgcaccttggacgccatgaaggttttctgcaacatggagactggc
gagacctgcgtctaccccaacccagcgaacgttcccaagaagaactggtggagcagcaag
agcaaggacaagaaacatatctggtttggggaaaccatcaatggtggcttccacttcagc
tatggtgatgacaacctagctcccaacacggccaacgtccagatgaccttcctacgcctg
ctgtccaccgagggctcccagaatatcacctaccactgcaaggacagcattgcctacctg
gacgaagcagccggcaacctcaagaaggccctgctcatccaaggctccaatgacgtggag
atccgggctgagggcaacagccggttcacatacactgtcctgaaggatggctgcacgaaa
cacaccggtaagtggggcaagactctgatcgagtaccggtcacagaagacctcgcgcctc
cccatcattgacattgcgcccatggacataggagggcccgagcaggaattcggtgtggac
atagggcctgtctgcttcttgtaa

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