Mirounga leonina (Southern elephant seal): 118008845
Help
Entry
118008845 CDS
T07472
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mlx01002
]
118008845
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mlx04121
]
118008845
Enzymes [BR:
mlx01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118008845
Peptidases and inhibitors [BR:
mlx01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118008845
Ubiquitin system [BR:
mlx04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118008845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3517
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
118008845
NCBI-ProteinID:
XP_034858592
LinkDB
All DBs
Position
Unknown
AA seq
1765 aa
AA seq
DB search
MSSMTATTRGSPIGGNDIQGQAPDGQSQPSFQQNQTSSADSSNENSLATPPDEQGQGDAP
PQHEDKEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQ
RFFRDGLTVSFTKILMDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLDLLAMA
LNPHCKFHIYNGTRPCESVSTNAQLPEDELFARSSDPRSPKVCWFSKLNTVLCYYKTSVT
YIKCEILTYELLFTLICVFFADSTTVEKLRAICLDHAKLGENNLGPSLESLFFGPSASRV
LYLTEVAYALLMPASAPLADDSSDFQFHFLKSGGLPLVLSMLTRNNFLPNTDTETRRGAY
FNGLKIAKLLLTAIGYGHVRAVAEACQPVVEGADPITPINQVTHDQAVVLQNALQIIPNP
SSECMLRNVSIRLAQQISDEASRHMPDTCVIRAIQKIIWASGCGALDLVFSPNEEITKIY
EMTPSASSEPDMEDEQVCCEALEVMTLCFALIPTALDALSKEKAWQTFIIDLLLHCPSKT
VRQLAQEQFFLMCTRCCMGHRPLLFFITLLFTILGSTARERGKHSGDYFTLLRHLLNYAY
NSNINVPNAEVLLNNEIDWLKRIRDNVKNTGETGVEEPILEGHLGVTKELLAFQTPEKKY
HIGCEKGGANLIKELIDDFIFPASKVYLQCMRNGELPTEQAIPVCSSPATINAGFELLVV
LAVGCVRNLKQIVDCLTEMYYMGTAITTCEALTEWEYLPPVGPRPSKGFVGLKNAGATCY
MNSVIQQLYMIPSIRNSILAVEGTGSDVDDDMFGDEKQDSESTVDPRDDVFGYPHQFEDK
PALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDAL
EFFNSLVDSLDEALKALGHPAILSQVLGGSFADQKICQGCPHRYECEESFTTLNVDIRNH
QNLLDSLEQYIKGDLLEGANAYRCEKCDKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERE
CAIKFNDYFEFPRELDMEPYTVPGVAKLEGNNVNPHSQLIKQNEQSESETTGSTKYRLVG
VLVHSGQASGGHYYSYIIQRNGKDGERNCWYKFDDGDVTECKMDDDEEMKNQCFGGEYMG
EVFDHMMKRMSYRRQKRWWNAYILFYERMDTVDQDDQMIRYISELTITRPHQIMSPAIER
SVRKQNVQFMHNRMQYSLEYFQFVKKLLTCNGIYLSPVPGQDHLLPEAEEITMISIQLAA
RFLFTTGFHTKKIVRGPASDWYDALCILLRHSKNVRFWFAHNVLFNVSNRFSEYLLECPS
AEVRGAFAKLIVFIAHFSLQDGPCPSSFTSPGLSGQACDNLSLSDHLLRAVLNLLRREVS
EHGRHLQQYFNLFVMYANLGMAEKTQLLKLSVPATFMLVSLDEGPGPPIKYQYAELGKLY
SVVSQLIRCCNVSSRMQSSINGNPPLPNPFGDPNLSQPIMPIQQNVADILFVRTSYVKKI
IEDCSNSEETIKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLLQILLIEDS
WQTHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSSCPVAYQILQGNG
DLKRKWTWAVEWLGDELERRPYTGNPQYAYNSWSPPVQSNETSNGYFLERSHSARMTLAK
ACELCPEEEPDDQDAPDEHESSLPEDTPLYPHSSGSHCQQNNYVHGQPYTGPAAQHLNNH
QKTGQHAQENFEGNEEVSSSQMKDQ
NT seq
5298 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtatgacagccacaactcgtggctctccaataggagggaatgacatccaaggc
caggctcctgatggacaatctcagccctccttccagcagaatcagacctcatcagctgac
tcctccaatgagaattccctagcaactcccccagatgaacaaggtcaaggtgatgctcca
ccacagcacgaagacaaagaacctgcatttccacatactgacttggcaaagttggatgac
atgatcaataggcctcgatgggtggttccagttttgccgaaaggggaattagaagtgctt
ttagaagctgctattgatcttagtaaaaaaggtcttgatgttaaaagtgaagcatgtcag
cgtttttttcgagatgggttaaccgtatctttcactaagattcttatggatgaggcagtg
agtggctggaaatttgaaattcataggtgtattattaacaatactcatcgtttggtggag
ctttgtgtggccaagttgtcccaagactggtttccacttctagatcttcttgctatggcc
ttaaatccacattgcaaattccatatctacaatggtacacgtccatgtgaatcagtttca
acaaatgctcagttgcctgaagatgaactatttgctcgttcttcagatcctcgatcacca
aaagtgtgttggttttcaaaattaaatactgttttgtgttactacaaaacttcagtgaca
tatattaaatgtgaaatattaacatatgaattactttttactttgatctgtgttttcttt
gcagatagcacaacagtagaaaaattaagagctatttgtctggatcatgcaaaacttgga
gaaaataaccttggaccatctcttgaatcacttttctttggtccttctgcctcccgagtg
ctatacctaacagaggtcgcttatgccttgttaatgcctgctagtgcacctttggcagat
gattcctctgactttcaatttcacttcttaaaaagtggtggcttacctctggtactgagt
atgttaacaagaaataacttcctgccaaatacagatacagaaactcgaaggggtgcttac
ttcaatggtcttaagatagccaaactcttgttaactgccataggctatggccatgttcga
gctgtagcagaagcttgtcagccagttgtagaaggtgcagatcccataacaccgattaat
caagttactcatgatcaagcagtggtgctacaaaatgcccttcagattattcctaatcca
tcatctgagtgcatgcttagaaatgtatccatacgtcttgcccagcaaatatctgatgag
gcttcaagacacatgcctgatacttgtgtaattagagctatacaaaaaatcatctgggca
tcaggatgtggggcattagatttggtatttagccccaatgaagaaatcacaaaaatttat
gagatgacccccagtgcaagcagtgagccagacatggaggatgaacaggtttgctgtgaa
gcattggaagtgatgacattatgttttgctctgattccaacagccttggatgcacttagt
aaagaaaaagcctggcagacatttatcatcgacttactattgcactgtcccagcaaaact
gttcgtcagttggcacaggagcaattttttttaatgtgcacaagatgttgcatgggacac
aggcctctacttttcttcattactctgctctttaccattttggggagcacagcaagagag
agaggtaaacattcaggtgactatttcactcttctacggcaccttcttaattatgcttac
aacagcaatatcaacgtacccaatgctgaagttcttctaaacaatgaaatagattggctc
aaaaggattagggataacgttaaaaacacaggtgaaacaggtgttgaagagccaatcttg
gaaggtcaccttggggtaacaaaagagttactagcctttcaaacacctgagaaaaagtat
catattggttgtgaaaaaggaggtgctaatctcattaaagaattaattgatgatttcatc
tttcctgcttccaaagtttacttgcaatgtatgagaaatggagaactgccaactgagcag
gctatcccagtctgtagttcacctgctactatcaatgctggttttgaactacttgtagta
ttagctgttggctgtgtaaggaacctcaaacaaatagtagactgtttgactgaaatgtat
tacatgggcacagcaataactacttgtgaagctcttactgaatgggagtatctaccacct
gttggaccccgcccatcaaaaggatttgtgggactcaaaaatgctggtgctacttgttat
atgaactctgtgatccaacagctgtacatgattccttccatcagaaacagtattcttgct
gttgaaggcacaggtagtgatgtagatgatgatatgttcggtgatgagaagcaggacagt
gagagtactgttgatccccgagatgatgtatttggatatcctcatcaatttgaagacaaa
ccagctttgagtaagacagaagataggaaagaatacaatattggtgtcctaagacatctt
caggtcatctttggtcatttagctgcttcccgactacaatactatgtgcccagaggattt
tggaaacagttcaggctttggggtgaacctgttaatcttcgggaacaacatgatgcctta
gagttttttaattctttggtggatagtttagatgaagctttaaaagctttaggacatcca
gctatactaagtcaagtcctgggaggttcatttgctgatcagaagatttgccaaggctgc
ccccatagatacgagtgtgaagaatcttttacaactctgaatgtagatattagaaatcac
caaaaccttcttgattctttggaacagtatatcaagggagatttattggaaggtgcaaat
gcatatcgatgtgaaaaatgtgataaaaaggttgatacagtaaagcgcttgctaattaaa
aagttgcctcctgttcttgctatccaattgaaacgatttgactatgactgggaaagagaa
tgtgcaattaaattcaatgattattttgaatttccacgagagttggacatggaaccttac
acagtaccaggtgttgcaaaactggaaggaaataacgtaaacccacacagtcagttgata
aaacagaatgagcagtctgaaagtgagacaacaggaagcacaaaatacagacttgtgggt
gtgcttgtacacagtggtcaagcaagtggaggacattattattcttacatcattcagagg
aatggtaaagatggtgagagaaattgctggtataaatttgatgatggagatgtaacagaa
tgtaaaatggatgatgatgaagaaatgaaaaatcagtgttttggtggagagtacatggga
gaagtatttgatcatatgatgaagcggatgtcatacaggcggcaaaaaagatggtggaat
gcttatatacttttttatgaacgaatggacacagtagaccaagatgatcagatgataaga
tacatatcagagcttactattacaagaccccatcaaattatgtcaccagccattgagaga
agtgttcgaaaacaaaatgtgcaattcatgcataaccgaatgcagtacagtttagaatat
tttcagtttgtgaaaaaactgcttacatgtaatggtatttatctaagccctgttccagga
caagatcacttattgcctgaagcagaagaaatcactatgattagtattcaacttgcagct
agattcctctttaccactggatttcacacaaagaaaattgtccgtggccctgccagtgat
tggtatgatgcactgtgcattctactccgtcatagcaaaaatgtgcgattttggtttgct
cataatgttctttttaatgtttcaaatcgcttctctgaatatctcctcgagtgccctagt
gccgaagtgaggggtgcatttgcaaaacttatagtatttattgcacatttttctttgcaa
gatgggccttgtccttcatcatttacatctcctggactttctggtcaggcatgtgataac
ttaagcttgagtgatcacttactaagagcagtattaaatctccttagaagggaagtttca
gagcatggccgtcatttacagcaatatttcaatctgtttgtaatgtatgctaatttaggt
atggcagaaaagacacagcttctaaaattgagtgtacctgctacatttatgctagtgtct
ttagatgaaggaccaggtcctccaatcaaataccagtatgctgaattgggcaagttatat
tcagtagtgtctcagctgatccgctgttgcaatgtctcatcaagaatgcagtcttcaatc
aatggtaatccccctcttcccaatccttttggtgatcccaatttatcacagcctataatg
ccaattcagcagaatgtcgcagacattttgtttgtgagaacaagttatgtgaagaaaatt
attgaagactgcagtaactcagaggaaaccatcaaattgcttcgtttttgctgctgggag
aatcctcagttctcatctactgtcctcagtgaacttctctggcaggttgcatattcatac
acctatgaacttcggccatatttggatttacttttgcaaattttacttattgaagattct
tggcagactcacagaattcataatgcacttaaaggaatcccagatgatcgagatggtttg
tttgatacaatccagcgctctaagaatcactatcaaaaaagagcataccaatgtataaaa
tgtatggtagcactctttagcagttgtcctgttgcttaccaaatattacagggtaatgga
gatcttaaaagaaagtggacctgggcagtggaatggcttggagatgaacttgaaagaaga
ccttatactggcaatcctcaatatgcttacaatagttggtctcctccagtgcaaagcaat
gaaacatcaaatggttatttcttagagagatcacatagtgcaaggatgactcttgcaaaa
gcttgtgaactctgtccagaggaggagccagatgaccaggatgccccagatgagcatgag
tcatctctaccagaagataccccattgtatcctcattcatctggctctcactgtcaacag
aataattatgtgcatggacagccatatacagggccagcagcacaacacttgaacaaccat
caaaaaactggccaacatgcacaagaaaactttgaaggcaatgaagaagtatcctcatct
caaatgaaggatcagtga
DBGET
integrated database retrieval system
