Mirounga leonina (Southern elephant seal): 118008899
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Entry
118008899 CDS
T07472
Symbol
DDX23
Name
(RefSeq) probable ATP-dependent RNA helicase DDX23
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118008899 (DDX23)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mlx03041
]
118008899 (DDX23)
Enzymes [BR:
mlx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118008899 (DDX23)
Spliceosome [BR:
mlx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
118008899 (DDX23)
Complex C
U5 SnRNP specific factors
118008899 (DDX23)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-GeneID:
118008899
NCBI-ProteinID:
XP_034858650
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MAGELADKKDRDASPSKEERKRSRTPDRERDRDRDRKSSPSKDRKRHRSRDRRRGGSRSR
SRSRSKSAERERRHKERERDKERDRNKKDRDRDKDGHRRDKDRKRSSLSPGRGKDFKSRK
DRDSKKDEEDEHGDKKPKAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQE
VEERQRMLEEERKKRKQFQDMGRKMLEDPQERERRERRERMERETNGNEDEEGRQKIREE
KDKSKELHAIKERYLGGIKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQLLG
RGFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQK
KLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQ
AIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTREL
AQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVL
SRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYR
QTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILE
QGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVA
TDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELK
QAILESPVSSCPPELANHPDAQHKPGTILTKKRREETIFA
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagagctagctgacaaaaaggaccgggatgcatccccttccaaggaggaaagg
aagagatctcggactcccgacagagagcgagatagagaccgggaccggaagtcttcccca
tctaaagacaggaagcggcatcgttcaagggataggcgtcggggaggcagccgttctcgc
tctcgttcccgttccaagtccgcagaaagagagcgaaggcataaggaacgagaacgggat
aaggagcgtgaccggaataagaaggaccgagaccgggacaaggatgggcacagacgggac
aaggaccgtaagcgatccagcttatctcctggccgaggaaaagattttaaatctcggaaa
gacagagactctaagaaggatgaagaggatgaacacggtgataagaagcctaaggcacag
ccattatccctggaggaacttctggccaagaaaaaggctgaggaagaagccgaggctaag
cccaagttcctctccaaagcagaacgagaggctgaagccctgaagcggcggcagcaggag
gtggaggagcgacagagaatgctcgaagaggagcggaagaagaggaaacagttccaggat
atgggcaggaaaatgttggaagaccctcaggagcgggaacgtcgggaacgcagggagagg
atggagcgggagaccaatggaaacgaggatgaggaagggcggcagaagatccgggaggag
aaggataagagcaaggaactgcatgccattaaggagcgatatctgggtggcatcaagaag
cgccgccgcacgaggcatctcaacgaccgcaagtttgtctttgagtgggatgcctccgag
gacacatccatcgactacaaccccctatacaaggagcggcaccaggtgcagttgttgggg
cggggcttcattgcaggcattgacctgaagcagcagaagcgggagcagtcgcgtttctat
ggagacctaatggagaagaggcggacactggaagaaaaggagcaggaggaggccagactc
cgcaagctccgaaagaaggaggccaagcagcgctgggacgatcggcactggtcccagaag
aagttagatgagatgacggacagggactggcggatcttcagagaggactacagcatcacc
accaaaggtggcaagatccccaatcccatccggtcctggaaggactcttctctgcccccg
catatcttggaggtcatcgataagtgtggctacaaggaaccgacacctatccagcgtcag
gcaatccccattgggctgcagaatcgtgacatcattggtgtagctgagaccggcagcggc
aagacggcagccttcctcatccctttgctggtctggatcaccactctccccaaaattgac
aggatcgaagagtcagaccagggcccttacgccatcattctggcccccactcgtgagttg
gcccagcagattgaggaagagaccatcaagtttgggaagccactgggcatccgcactgtg
gccgtcattggcggcatctccagagaagaccagggcttcaggctgcgcatgggctgtgag
attgtgatcgctaccccaggacgtctgattgatgtgttggagaaccgttacctcgtgctg
agccgctgtacctatgtggttctggatgaggcagatcggatgattgacatgggctttgag
cccgatgtccagaagatcctggagcacatgcccgtcagcaaccagaagccggacacagat
gaggctgaggaccctgagaagatgctggccaacttcgagtcgggaaaacataagtaccgt
caaacagtcatgttcacggccaccatgcccccggcggtggagcgtctggcccggagctat
ctccggcgaccagctgtggtgtacatcggctctgcgggcaagccccacgaacgtgtggaa
cagaaggtcttcctcatgtcagagtcagaaaagaggaaaaagctgctggcaatcttggaa
caaggctttgatccacccattatcatttttgtcaaccagaagaagggctgtgatgttttg
gcgaaatccctggagaagatggggtacaatgcttgcacgttgcatggtgggaaaggccag
gagcagcgagagtttgccctgtccaacctcaaggctggggccaaggacattttggtggct
acagatgtggcaggtcgtggtatcgatatccaagatgtgtctatggttgtcaactatgat
atggccaaaaacattgaagattacatccaccgcattggccgcacgggacgagctggcaag
agtggtgtggccatcaccttcctcaccaaagaggactccgctgtgttctatgagctgaag
caagccatcctggagagcccggtgtcctcctgccccccggagctagccaaccacccagat
gcccagcacaagccaggcaccatcctcaccaagaagcgccgggaggagacgatatttgcc
tga
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integrated database retrieval system
